Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->YAB1                         --------->AHL20(2)                   --------->ANAC55(1)                   --------->YAB1                   --------->ANAC46                <---------ZAT18                --------->ZAT18         --------->ARR14(2)              <---------ZAT14   <---------At4g35610           --------->LBD16   <---------TOE2(3)     <---------ICU4 <---------ARR14(2)    ------>NtERF2  --------->MYB52(1)  --------->YAB1    ------->TEIL         --------->ANAC46               ------->GAMYB -----DOF2    <---------ZAT18   --------->At4g35610         <---------LBD16              --------->MYB52(1) -DOF2        --------->ZAT14   --------->ZAT2   <------ZmHOX2a(1)          --------->At4g35610   tgattaagggagacagagcacacataataatatcagcagacgaatccctgaggaacatttttgccgcaagagttgagaagcagagtgagagcaacgggaa  69500                                                                <-----------HVH21                                                             ---------->DOF2                                                 --------->MYB52(1)                               ---                                        <---------ZAT18 --------->ZAT2                          -----                                        --------->ZAT18 <------NtERF2                     -----------                                        --------->ZAT14 <---------ZAT2                --------->ZAT18                --------->HSFB2a(2)     <---------ZAT14 --------->At4g35610 <----------DOF2 <--------                <---------HSFB2a(2)  <---------ANAC46   <---------At4g35610--------->TOE2(3)---------           <---------GLK1(1)       <---------ZAT14 --------->ANAC58     <---------ALFIN1  ===========      <------ZmHOX2a(1)            --------->ZAT14 --------->ANAC46 <---------At4g35610--------->ANAC58 >>>>>>>>>WRKY18--------->LBD16    --------->ZAT18 --------->ANAC58 --------->At4g35610--------->ANAC58   ttttgacaggagcaactccgagaatgctggttttaagtgcagtgcacagacaaacggcagcttcaaagtcagccaaacctttgatgagcgagcaacactc  69600                    --------->bZIP60(1)                    <---------bZIP60(1)        <---------ALFIN1                 --------->WRKY12              ----------->RAV1(1)          <---------SPL7                  <---------At4g35610          <---------ZAT14                 --------->At4g35610         <---------REM1(1)                --------->ZAT2         <---------ANAC58                 <---------ZAT2       <---------MYB46(3)              --------->MYB46(3)      --------->ALFIN1               ------>MYB83      <---------DEAR3(1)           <---------MYB46(2)           <---------ANAC46            <--------   <---------DEAR3(1)<---------MYB59 --------->MYB52(1)         <---------ANAC58            <-------- --->ZmHOX2a(1)  ----------->HVH21 --------->AtMYB61 --------->ANAC46                       <-------- ------>RAV1(2)  --------->WRKY38(1) ------>MYB46(1) --------->ANAC58                      <------NtERF2 >RAV1(1)<---------ANAC58          <---------MYB59   --------->ANAC58               <---------ANAC46 -ALFIN1<---------------AtSPL3   <-----------ARR10 <---------ALFIN1      <---------ANAC46<---------RAP2.6(2) >ZAT6<---------AtMYB61     -------->P-------->P <---------ALFIN1 --------->ALFIN1  <---------ANAC58 =======RAV ------->TEIL <---------MYB52(2) --------->PCF2      <---------ANAC58    <---------ANAC58<   ctggctcggtggtgtaccgatgacctcactaaccagacctaaccagctcccacacactccaaatttgagtgtgtctcttggacatttcgtggtggcttgt  69700                                   ------>ZmHOX2a(1)                                 ----------->RAV1(2)                               <---------PCF2                              <------NtERF2                              --------->ATERF1(1)                             <---------ATERF1(1)                             --------->ABI4(2)                             ------>NtERF2                            --------->ALFIN1                            <---------DEAR3(1)     --------->ALFIN1    <---------DEAR3(1)  --------->LBD16      <---------WRKY18(1) <---------LBD16       --------->MYB52(1)                                --------->At4g35610 <---------ANAC46     ----------->HVH21                                 ------------------------>ANAC81 <---------ANAC58    <----------DOF2                                   =============================HOX2a_HOX2a <---------ANAC58   <---------ANAC46                                   <------ZmHOX2a(1)        ----- -ANAC58            <---------ANAC58    ----------->HVH21              ============================HOX2a_HOX2a -ANAC58  --------->ATERF1(1)<---------MYB46(3)       >>>>>>>>>TBF1  <---------TOE2(3)       ------>ZmHOX2a(2) -ANAC46--------->ALFIN1 <---------DREB2C(2)      <------NtERF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ---------LBD16     <---------ANAC58  <---------REM1(1)         <---------YAB1              <------ZmHOX2a(2)   tttgcgggagggggagggcatggcttgacggtggctcctggtgtaacatggccgaagaagaatgttatgttaaggagcagcaagatgagaagagatcgca  69800                       --------->ARR11(3)                  <------MYB83                  <------MYB46(1)         --------->GLK1(1)                                                                      <----         --------->CCA1(2)                                                                      <----        <---------ARR14(2)                                                                      <----        --------->ARR14(2)                                                                  <--------     --------->HSFB2a(2)                                                                  <----------DOF2     <---------HSFB2a(2)                         --------->TOE1(2)                    <----------DOF2 <----------DOF2 --------->MYB59                 --------->TOE2(2)               <---------ANAC58 ----->DOF2    <---------MYB52(1)   <---------ZAT6      <------ZmHOX2a(1)  *TSS  <---------ANAC58  --   aagctttcgagatacccattaggtttatcttgaaactagtgctatgtgatacctatgaggaagaagagaggccttaacaatttgcgttctttctttgttg  69900                                <---------ANAC58                            <------------CBF                 ------->TEIL       --------->ATHB12    --------->ATHB51                  <---------ARR14(2)      <---------YAB1       <---------ICU4                    --------->ARR14(2)                   <--  <----------DOF2         --------->ICU4                  <---------ANAC55(2)                     <-- -----MYB46(3)       --------->ETT(2)                     --------->ANAC55(2)             <----------DOF2 --MYB46(1)          <---------ZAT18               --------->HSFB2a(2)                 <---------ARR11(3) --MYB83<------------CBF  <---------YAB1           ----------->GT1                     --------->ARR11(3) ---RAV1(1)       <---------ANAC46  <---------ZAT6 <---------HSFB2a(2)                 <-----------ARR10 ---->NtERF2    <----------DOF2 <---------ANAC58<---------AGP1    ---------->ID1       --------->GLK1(2)   gtgcctttatcattggggctttgtggacataattgtttgtgttatccctagttctgtaaaacgtatttgtcttcttctatactttggaaaatcttttccg  70000                                                                                      --------->WRKY38(1)                                                                                      ----------->HVH21                                                                                      --------->WRKY12                                                                                      --------->WRKY45                                                                                    --------->At4g35610                                           --------->AHL20(2)<---------YAB1       <------ZmHOX2a(1)                               --------->ANAC58 <---------ARR11(3)              <---------TOE2(3)                               <----------ID1   --------->ARR11(3)     <---------ANAC58                               --------->ANAC58--------->RVE1(1)       <---------ANAC46                               --------->ANAC46--------->CCA1(1)       <---------ANAC58 -------ATHB12 <---------MYB46(3)       --------->YAB1     <----------DOF2  <----------DOF2 ----ZmHOX2a(2)<-----------RAV1(1)     <-------TEIL   <---------WOX13(1)    --------->CCA1(2)       -   atcactcaaaaatacagttgttgctgttcgaaaacgacacattcatataatatctgatagacttttatagatggcgagatttaaggagttgacccttgga  70100                                                                                          --------->AHL20(1)                                                                                          <---------ARR11(3)                                                                                 --------->ALFIN1                                                                               <---------TGA1a                                                                               --------->TGA1a                                                                               <---------bZIP60(2)             <-----------------AGL1                                  --------->CCA1(2)    <---------AHL20(1)          <---------DAG2         ------->TEIL                   ---------->DOF2<---------O2          <----------DOF2  <---------AHL20(2)                   =========================bZIP_DOF       <-----------GT1    <---------AHL20(2)                ----------->GT1    <---------ANAC58  ----------->GT1         --------->AHL20(2)             ------------------------>ANAC81  --------->AHL20(2) --------->DAG2       <------ZmHOX2a(1)              <---------HSFB2a(2)       --------->O2 --------->DOF2     <---------TOE2(3)                --------->HSFB2a(2)       <---------ANAC58     -   gaaaaagtttaacttttcccttgaggaaataaatgaacttgtaaacaaaccccttggagaagaagtaaaagataaacatagacgtggctctatatattag  70200                                                                                          <---------ANAC46                                                                                        <---------LBD16                                                                                       <-----------RAV1(1)                                                                                     ----------->RAV1(2)                                                                                  <---------HSFB2a(1)                                                                                  --------->HSFC1(2)                                                                                  <---------HSFC1(2)                                                                                  --------->MYB46(3)              <---------ANAC46                                                    --------->HSFB2a(1)              <---------ANAC58                                                --------->LBD16              <---------ANAC58                                               --------->ANAC46       --------->MYB46(3)                                                   <---------LBD16      --------->ANAC46                                                      <---------------------WRI1     ------>MYB46(1)                                      <---------HSFC1(2)<---------At4g35610     ------>MYB83                                         --------->HSFC1(2)--------->At4g35610    <---------ALFIN1                          ----------->GT1     <---------YAB1<---------ARR14(2)   --------->MYB46(3)             <---------ANAC46   --------->YAB1       <---------DEAR3(1) -------->GLK1(1)      <-----------ARR10      <---------ANAC46--------->REM1(1) --------->ARR14(2) --   agaaacccacccagtggcttaggctaatctaatctggtgttgaaaatggggtttataagaagctacttctcattcgtctgcggaaccatctgggggatat  70300                                 --------->DAG2                --------->HSFB2a(1)   <------NtERF2             --------->REM1(1) ---------->DOF2     --------->KAN4(2)                 ---------->DOF2     <----------CDC5     --------->YAB1        <---------At4g35610              --------->GLK1(1)    --------->ZAT14  --------------->AGL15     --------->At4g35610              --------->CCA1(2)  --    --------->ZAT18  <---------------AGL15 --------->ANAC58                    --------->ARR11(3)  --    <---------ZAT14 ----------------->AGL2 --------->ANAC46        <---------At4g35610             --   <---------ANAC46 ----------------->AGL3 --------->ANAC58        --------->At4g35610     ---------- -------->DOF2  <---------HSFB2a(1) --------->ALFIN1           --------->AtLEC2<---------ARR11(3)  --   atatagcgcagagctacaacgttccaaacatagaaaaggtggctcaagcagcttattccatgggcatgcagatggaagaaagatatcgaaagacaaagac  70400  Previous    Next  AGI:  At4g00165.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT2G45180.1); similar to unknown [Populus trichocarpa] (GB:ABK95307.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic protein, helical; (InterPro:IPR013770) Range:  from: 69273    to: 69875    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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