Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------ICU4                                                      --------->YAB1                                                     --------->ICU4                                                   --------->YAB1                                                   <---------ICU4                                                  --------->ICU4                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                  <---------ATHB51                     <---------WOX13(1)         --------->YAB1                          <----------DOF2                   --------->ATHB12        --------->ANAC55(2)                         <---------ANAC58                  --------->ICU4           --------->ANAC46                            <---------ANAC58                  <---------ATHB12         ----------->GT1                          <---------CCA1(2)                  <---------YAB1           <---------ANAC55(2)                     --------->LBD16               ------------>ATHB5          --------->ANAC58                      --------->LBD16             --------->ANAC58              --------->ANAC55(1)              <----------DOF2             --------->ANAC58              --------->ANAC58   --------->MYB52(1) <---------LBD16           <-----------GT1             <-----------GT1-------->HAHB4    --------->REM1(1)      ------         --------->YAB1           <----------DOF2<---------AHL20(1)----------->GT1--------->ANAC46   aacaagtcgaatgataccccatgattgacattaactcttttttacacgtaaaataattatgagccaacgtcgttacatctttccccgtagctttccaaaa  23031100                                                           <---------ANAC58                                                         =========================MYC_MYB                                                    <---------ZAT14     <---------TGA1a                                                <---------ALFIN1 <---------ANAC58                                               --------->MYB46(3)<---------ANAC46                                             <---------WRKY18(1) <---------ANAC55(1)                                            --------->WRKY45  <---------MYB52(1)                                            <---------ETT(2) <-------GAMYB                                            --------->WRKY12<---------MYB46(3)                                            --------->WRKY38(1)  <---------RAP2.6(2)                                          --------->At4g35610=====================MYC_MYB                                         <---------MYB46(3)<---------RAP2.6(2)                 --------->ANAC55(2)   --------->ZAT2    ------------>AtMYB77      <<<<<<<<<<MYB80                 ----------->GT1       --------->At4g35610 <---------ANAC58------->MYC3                 <---------ANAC55(2)   <---------ZAT2  <-------GAMYB ----------->HVH21              -       --------->HSFB2a(1)             <---------At4g35610 <---------ANAC46<-------MYC3      --------       <---------HSFB2a(1)         XXXXXXXXXXXXXXXXXXXX>MIR780.1 <---------ANAC58<---------AtMYB61 <-      --------->ARR11(3)           --------->ANAC46 --------->ZAT14<---------At4g35610      ---------      <---------ARR11(3)          --------->HSFB2a(2)  ===========================MYC_MYB   <-------- ---->DOF2       --------->ANAC46 <---------HSFB2a(2) <---------MYB46(3)=============================   atcggcgaaatcttccaacgcgtaattcaagtttttctcgcagctgttgaccactgcggttgcggttgcgtctgacatgtgttttggtttgattccagag  23031200                                        <---------MYB52(2)                      <-------MYC3       <---------ALFIN1              --------->MYB46(3)                         ------->MYC2  --------->ANAC58                  <------NtERF2                               ------->MYC3  --------->ANAC58                  <---------At4g35610                         <-------MYC2 --------->DOF2                  --------->At4g35610                        <------ZmHOX2a(1) ->LBD16  <----------DOF2     --------->At4g35610                          <------MYB83 -----ZmHOX2a(1)              <---------At4g35610                          <------MYB46(1) >HSFB2a(2)       <---------LBD16<------NtERF2 <---------LBD16           <--------P              ---- -HSFB2a(2)     ----------->HVH21--------->ATERF1(1)               --------->ATHB12    <---------TOE1(3) ==========bZIP_DOF<---------ANAC46--------->RAP2.6(2)           <-----------HVH21     <---------TOE2(3)   aggaaagtcacactttgtttgacggatgtttcagcggcagccactaatgctcggattagttcgatggggtcattggtaggaacgtgtttaagggttttgc  23031300                                                                 --------->DAG2                                                          ----------->GT1                                       ----------->HVH21  --------->ALFIN1                                      --------->LBD16     <---------ANAC46                                     --------->ANAC46   <---------ANAC58                                     --------->LBD16    <---------ANAC58                                    <---------LBD16     <---------ANAC46                                 <---------GLK1(1)     <---------DEAR3(1)                                --------->ARR14(2)    --------->ZAT18                                <---------ARR14(2)    --------->SPL7                                <                                <---------GLK1(2)     <---------ABI4(1)           <---------WRKY18(1)                            --------->ZAT14           <---------ZAT14        --------->MYB52(2)    <-                            <---------ZAT14         <---------SPL7           <---------MYB46(3)    <-                      <---------DOF5.7(2)          <---------ANAC58         <---------TOE1(2)      <-               <---------MYB52(1)--------->GLK1(1) <---------ANAC46        <---------MYB52(1)    ----              <-------GAMYB--------->ALFIN1   <----------DOF2  ---------->DOF2   ----------->HVH21 <-             <---------MYB46(3)<---------At4g35610 <---------ANAC58  --------->MYB111(2)        <---- ------->RAV1(1)      --------->MYB52(1)------>NtERF2--------->ALFIN1<---------MYB46(3)       <------   aacatagacttgtgtccgttgggataacggtgcagattcccgcgactgctttggcgtgcggtgtgaaaaggtagttcgttcgtttgactggtttagccgt  23031400                                                                                                  ===                                                                                                  ---                                                                                                 ----                                                                                                 ====                                                                                                 <---                                                                                                 <---                                                                                                -----           --------->MYB46(3)                                                                   <----       <------NtERF2                                                                            -----      --------->LBD16                                                                           -----     <---------RAP2.6(2)                                                                        <----     <---------ANAC46                                                                        --------    <---------LBD16                                <---------ICU4                            -------- <-------GAMYB                                     --------->ATHB12                     --------->ANAC58 ---------MYB46(3)                                <---------YAB1                        <------------ --------ANAC46                             <---------ZAT6                 ---------->DOF2 --------->MYB52(1) --------ANAC58                           <---------ANAC58           ------->TEIL       --------->ANAC58 --------ANAC58                           <---------ANAC46          --------->MYB52(1)---------->DOF2 -------->AtMYB77                     <---------WOX13(1)      <---------ANAC58     ------>ZmHOX2a(2) --------RAP2.6(2)      ---------->DOF2   <---------ANAC58    <---------ANAC58   <---------ARR14(2)<- -----MYB52(1)--------->ARR14(2)    --------->ATHB12          <---------ANAC46   --------->ARR14(2)<- ---MYB46(3)  <---------ARR14(2)   <---------YAB1 --------->ICU4 <---------TOE1(2) ==================   tgcggttgcggcaacgaatatgaagagaaagaagagtttgattggagtgttcatgattgtgttttcgtatgaacggagaaagggatcggaaaggaacgga  23031500     <------ZmHOX2a(1) ===========HOX2a_HOX2a --->ZmHOX2a(2) ----->GLK1(1) ===========HOX2a_HOX2a ---ZmHOX2a(2) ------GLK1(1) ---->ARR11(3)                                                                           <----------DOF2 -----ARR14(2)                                                          --------------->AGL15 -->TEIL                                                                <---------------AGL15 ---->ARR14(2)                                                         <-----------------AGL1 -----AGP1                                                 <-----------TBP         <---------At4g35610 ->ANAC58                                    ------->TEIL<---------AHL20(2)        <---------ZAT2 ->ANAC58                                   <---------AtLEC2           <-----------------AGL2 ---AtSPL3                            <---------ARR11(3)<---------AHL20(1)         --------->ZAT2 --------LBD16 ----------->GT1        --------->ARR11(3)<---------ARR11(3)         <------NtERF2 --------HSFB2a(2)                   --------->YAB1     --------->ARR11(3)         --------->At4g35610 ===========HOX2a_HOX2a           ---------->DOF2  <---------ANAC46    <-----------------AGL3   tctcggaggaagaagagaggttttttgatatagctagaaagataatgcatgttttgtatatatttatagttcgtctatatttggcagctagcttttagtt  23031600                 <---------ANAC55(2)               --------->AHL20(2)            --------->ATHB51            --------->YAB1              ----------->GT1            <---------ICU4             --------->LBD16                             <---------ICU4            -------->HAHB4            <---------ANAC58                 --------->AHL20(1)            <--------HAHB4            <---------ANAC46                 <---------AHL20(2)      <-----            <--------ATHB1<------MYB83<---------ANAC58                 --------->AHL20(2)      ------           <---------ATHB51          <---------LBD16             <---------ANAC46  --------->YAB1           <---------YAB1 <------MYB46(1)<----------DOF2      <---------MYB52(1)  --------->ICU4           --------->AHL20(2)----------->GT1        ----------->GT1    <---------AHL20(1)     -------           --------->ICU4--------->MYB111(1)     <---------LBD16 ----------->GT1  <---------YAB1         --------->YAB1 <--------P<------------CBF<---------ANAC46    --------->ICU4 <---------YAB1<-   tttttttttgttaataattacatatggtagggagtgaattgcgcgttaattttcgggttaaacggttgtgtaatattttagttgatgatgacaaaatgat  23031700                                                               --------->ANAC46                                                        <---------ATHB12                         <---                                                --------->ARR11(3)                               ----                                                <---------ARR11(3)                         --------->YAB1                          --------->ARR11(3)  <---------HSFC1(2)              <----------DOF2    <--- ----ARR11(3)            --------->YAB1       --------->HSFB2a(1)             <---------DAG2   <----- --->ARR11(3)--------->AHL20(2)               --------->HSFC1(2)        --------------->AtSPL8 ------ -->YAB1 <---------TOE2(3)<---------ARR11(3)  <---------HSFB2a(1)     <---------AHL20(2)<------------ ----------GT1  ---------->DOF2             ---------->DOF2  <-----------GT1------->TEIL-------------   attacattttttagattaaaaagaaaatgatatttagagtttagaagaaagttctcaaatcatttacgacattttatgaactttttatttctaaaataag  23031800                                                                                               <-----                                                                                               ------                                                                                              -------    ----------->GT1                                                                           <------ ------GLK1(2)                                                                              --------- ----->ARR11(3)                                    <---------AHL20(2)                      <---------YAB1 ------ARR11(3)                                   <---------AHL20(1)                   <---------ANAC58 ----TOE2(3)                                      --------->AHL20(1)            <---------AHL20(2) ----->ARR10                                   --------->CCA1(2)               <---------AHL20(2) ---AGL15                    --------->YAB1   <---------ARR11(3)               --------->AHL20(2) -->AGL15                   <---------YAB1    --------->ARR11(3)     --------->ZAT14   <---------ANAC58   attttgtggtatatttgaaattcgaacattttgataagaatttttgtagatatatattttgaaactctctgtttactaaattttaattttcttgtgataa  23031900                                                    ----------->GT1              <--------HAHB4               <---------YAB1--------->AHL20(1)              --------->YAB1            <---------AHL20(2)                               ---------->DOF2      --------->AHL20(2)                --------->AHL20(2)                             --------->ANAC46 ----ICU4     <---------ICU4            --------->AHL20(1)                           <-----------GT1 --->ATHB12  <---------ATHB12           <---------AHL20(1)                       <---------AHL20(2) -->ICU4   <-----------GT1             --------->AHL20(2)--------->ARR11(3)     --------->AHL20(1) ---YAB1  <---------AHL20(2)   <---------HSFB2a(2) --------->DAG2               <---------AHL20(1) >YAB1<---------AHL20(2)       --------->HSFB2a(2)---------->DOF2               <---------ARR11(3)   ttgaacatttttttaatcattttccaacaatttctacaaaattttatttttaaaaagtatatattggtccagttcaaaactatatatttacgaaagaaaa  23032000  Previous    Next  AGI:  At3g62180.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana] (TAIR:AT2G47050.1); similar to pollen development related protein [Brassica rapa subsp. chinensis] (GB:ABC25451.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 23030598    to: 23031454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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