Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------AHL20(2)           --------->AHL20(2)          --------->AHL20(2)                                                                        <      <---------YAB1                                                         --------->AHL20(2)    --  --------->KAN4(2)                         <---------At4g35610      --------->AHL20(1)            <- <----------TaMYB80                         --------->At4g35610      --------->AHL20(2)         ----- <---------GLK1(1)                 <---------YAB1                    <---------AHL20(2)        <----- -------->ARR11(3)            --------->ARR11(3)                --------->AHL20(2)           <------- -------->ARR14(2)           <---------CCA1(2)                  <---------AHL20(2)          --------- ---------ARR14(2)         --------->AHL20(2)            <---------ZAT18 ----------->GT1    <--------   tggatattctcatttaatttagtttaaaattatatctatgactgtcatcttaaatattgtgcccatataaataaaatgaaaaaatatgctattgattatt  22936400     <---------YAB1                                                   <---------WRKY12   --------->YAB1                                                     <---------WRKY38(1)  <---------YAB1                                          <----------DOF2                        ---- ---------AHL20(2)                               <-----------RAV1(1)  <---------WRKY45           ---- ------->AHL20(2)                        ----------->GT1 ------>ZmHOX2a(2)                       ---- --------AHL20(2)                  --------->AHL20(2)  <---------AGP1--------->WRKY18(1)         <--- ---->AHL20(2)                     <---------AHL20(1)  <---------ARR11(3)                       ----- ----YAB1                          <---------AHL20(2)  --------->ARR14(2)                       <---- --ICU4                            --------->AHL20(1)  <---------ARR14(2)            <---------GLK1(1) >ICU4         <---------REM1(1)  <---------ATHB12     --------->ARR11(3)          --------->ATHB12<- -YAB1--------->ZAT6              --------->AHL20(2)  <---------CCA1(2)  --------->MYB46(3)   -------   atttattatcagtagagatgtagaatacattttccaataaattttgttaatttgttggatcttttcttctggtcaactactaaattgatttcccaaaaat  22936500                                                                             --------->GLK1(1)                                                                             <---------GLK1(1)                                                                          <---------YAB1                                                                        <-----------GT1 ----->ATHB12                                                       --------->AHL20(1) ---->HAHB4                                                         <---------AHL20(1) ----->YAB1         <---------ARR11(3)          <---------TOE2(3)<---------AHL20(2) ------ICU4         <---------GLK1(2)         ---------->DOF2    --------->AHL20(2) ---->ICU4          --------->ARR11(3)     --------->YAB1    --------->AHL20(2)                    -- -----YAB1        --------->ICU4          --------->ICU4     <---------AHL20(2)              -------- --------YAB1   ---------->DOF2           <---------YAB1    --------->AHL20(2)               <------- -->YAB1--------->GLK1(2)            --------->ANAC55(2)    <---------AHL20(2)    <----------DOF2 ---   gattactgaaattctctgtaaagattttgtgatcaacatatgtaataataaaggtatgttttttaaattatatattacgatttcctttttaaaaacatct  22936600                                                                        --------->ARR11(3)                                                                    ---------->DOF2                       <-----------GT1     --------->GLK1(2)     ----------->TBP ---->ZmHOX2a(1) <----------DOF2          <---------GLK1(2)    <---------DAG2 ->ARR11(3)   ---------->ID1      <---------AHL20(2)     <-----------GT1<---------ARR11(3)  --------- --ARR11(3)  <-----------GT1 <---------ATHB12 ----------->GT1  <----------DOF2           <---------ALFIN1 ------>TOE2(3) <---------DAG2   --------->AHL20(2)    --------->AHL20(2)             --------->ANAC46   ccttaatatgagttttgacctttttattccactcattaaatccaaattctgtaaaaaataaacaactttataaaggtctcttaaattcgctccacctcca  22936700                                                                                             --------                                        --------------->AtSPL8                              <--------                                --------->HSFB2a(2)                                         <--------                                <---------HSFB2a(2)                                         ---------                                --------->HSFC1(1)                                       <---------ARR14(2)                <----------DOF2 <---------HSFC1(1)                                       --------->ARR14(2) >AtMYB61    ---------->ID1<---------MYB52(1)                               <---------LBD16<---------LBD16   ctagtagagacccttggcctttctctcccgttctctagaaattttgttccctcttactcttcttatttcttcatcgtcttcggagtaatgggttccggag  22936800      ------>ZmHOX2a(1)     --------->TOE2(3)                    ---------->DOF2  --------->ARR14(2)                  --------->TOE1(3)  <---------ARR11(3)                 ----------->GT1  --------->ARR11(3)                 <---------ANAC55(2)  <---------ARR14(2)                 <---------ANAC58 --------->RVE1(1)                   <---------ANAC46                                              -- ->LBD16                          <---------ATHB12       --------->TOE2(2)     --------->DAG2  ------ -HSFB2a(2)               --------->DEAR3(1)--------->ANAC58     ---------->DOF2              ------- -ANAC46                 --------->DEAR3(2) --------->ANAC58   <------ZmHOX2a(2)           --------->WOX13(1) >HSFB2a(2)        --------->AtLEC2  <---------ANAC58    --------->TOE1(2)   ---------->DOF2 <-------   aaaaaatcctcaagagcgtccattcaaaccgtcccaataacgtgaaaagcaatagcaaacatgggatcaaagatgtgccaaaagggtgtttagcaatcaa  22936900                                                         ------>MYB46(1)       ---------->DOF2                                 ------->GAMYB    ===================HOX2a_HOX2a                    --------->MYB46(3)      --------->MYB52(1)    <------ZmHOX2a(2)                               <-----------GT1 --------->AtLEC2       <------ZmHOX2a(1) ------->ALFIN1                                   <---------AHL20(2)--------->ANAC58    --------->At4g35610 ---->DOF2                                    <---------AHL20(2)    --------->ANAC46 <---------At4g35610 -->YAB1        <------ZmHOX2a(1)            <---------AHL20(2)     --------->ANAC58 --------->At4g35610 --ATHB12      ----------->GT1         ------>ZmHOX2a(1) ------>MYB83        ------>ZmHOX2a(1)   agtgggatcaaaagaagaggagaaacagagatttgttgttcctgttttttattttaaccatccattgttcatgcaactcctaagggaagcagaggaagag  22937000                                                 <-----------GT1                                        --------->ALFIN1                                       ------->PIF5                                       ------->MYC2                                       <-------PIF5                                       <-------MYC2                                       ------->MYC3                                       <-------MYC4                                       ------->MYC4                                       <-------MYC3                                      --------->PIF3(3)                                      <---------PIF3(3)              <---------------AtSPL8  --------->TGA1a              --------->DAG2          <---------TGA1a              --------------->AtSPL8  <---------O2                         ------->GAMYB              <---------------AtSPL3  =============================================MYC_MYB              --------------->AtSPL3  --------->O2                      ----------->RAV1(1)  <-------            ====================================bZIP_DOF           --------->ICU4       <---------MYB52(1)            ---------->DOF2           <---------ANAC46        --------->ANAC58        ----------->GT1  --------->ARR14(2)               ---------------->PIF3(2)   --------->ANAC46       ------>ZmHOX2a(2)  <---------ARR14(2)   --------->YAB1 <<<<<<<<<<HY5           --------->ANAC58      <------ZmHOX2a(2)   tatggattcgagcagaaaggtaccatcacaatcccttgccacgtggaagtttttcgatatgttcaagacatgatcaacagagagagatcggttaattacc  22937100              --------->YAB1            --------->ARR11(3)            <---------ARR11(3)           --------->YAB1          --------->ICU4          <---------YAB1        <---------ICU4                                                    <---------YAB1       --------->ICU4                                                   --------->YAB1     ------->GAMYB                                                     <---------YAB1           -----     --------->YAB1                --------->YAB1                      --------->ICU4           -----    --------->MYB46(3)          --------->YAB1                       --------->YAB1           <------   -------->P<---------YAB1---------->DOF2                          <---------YAB1       --------->MYB52(1)  ------->GAMYB   <-----------TGA1 <---------ICU4                   --------->ICU4   --------->ANAC58 --------->MYB46(3)       --------->YAB1       <---------MYB46(3) --------->YAB1     --------->ANAC58 <---------MYB111(2)   <---------ICU4 <---------ICU4             <---------YAB1  --------->ANAC58 <---------MYB55(2) --------->YAB1--------->ICU4                 --------->ICU4  --------->ANAC58 ----GT1--------->YAB1--------->ICU4  --------->YAB1      --------->ARR11(3)     --------->ANAC46   acaacaaccatcatgatcatcgtcataatcaaagtcataatcatcttgttggatgttttagagcttgatgatgatgatgatgcaagcaagcaaacggggt  22937200        <---------ANAC46        <---------ANAC58        <---------ANAC58                           <----------DOF2               --------->ALFIN1   > --------->ICU4                                <----------DOF2                --------->ALFIN1   <--- ------>GT1                  <----------DOF2<-----------GT1          ------>ZmHOX2a(2)       -------- ---->ALFIN1       <---------AHL20(2)       ---------->ID1         --------->ARR11(3)        -------- ---ANAC46  ----------------->AGL3         <-----------GT1         <---------ARR11(3)        --------   gtaaaaatttgcgtttcatatttagtttcttctttttgttttgtttttcctttcttttctaatgggtttgatcttgtggagttgtggagccaaacacggc  22937300  Previous    Next  AGI:  At3g61900.1    Description:  auxin-responsive family protein. similar to auxin-responsive family protein [Arabidopsis thaliana] (TAIR:AT2G46690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24297.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 22936788    to: 22937354    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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