Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <----------DOF2                                                                         <---------DAG2                                                                      <-----------GT1                                                                   <---------ANAC55(2)        <---------------AGL15                                      --------->ANAC55(2)        --------------->AGL15                                    --------->AHL20(2)       ----------------->AGL1                                 ------>MYB46(1)       ----------------->AG                                   ------>MYB83   <---------AHL20(2)       <-----------------AGL1                               <---------------AGL15       ----------------->AGL2                               --------------->AGL15       =====================================================================MADS_MADS       <-----------------AGL3                               <---------MYB59  --------->AHL20(2)       <-----------------AGL2                              ----------------->AGL3       ======================================================================MADS_MADS      <-------- <---------TOE2(3)                -------->P<--------P     ----------------->AGL2           <-------- --------->DAG2                <---------MYB52(2)          ----------------->AG        <---------TOE2(3) -------->DOF2                <---------At4g35610          ----------------->AGL1--------->AHL20(2) ---ID1<-----------------AG   --------->At4g35610  ----------->GT1 ----------->GT1<-----------GT1   aaaaaggttacctcatgtggtatgtcattttcagctaacccctctggttgccagagtaaataccaaattaagtaactttttaatttactaatgtataatt  22802500                                                                                              -------                                    <---------AHL20(1)                                        <------                                <---------AHL20(2)                                            -------                             <---------ARR11(3)                                        <-------GAMYB                             <---------AHL20(1)                                       <------MYB46(1)                       <-----------GT1                         <---------------AGL15  ----------->GT1                       --------->YAB1              --------->AHL20(1)                 <------MYB83                   <---------AHL20(2)              <---------AHL20(1)             <-----------RAV1(1)                   --------->AHL20(2)         --------->AHL20(2)               --------->ARR14(2) <---------YAB1   --------->AHL20(2)--------->ARR11(3)         --------------->AGL15  <---------MYB46(3) -AHL20(2)    ------>ZmHOX2a(1)--------->AHL20(2) --------->AHL20(2)           <---------ARR14(2) -YAB1   --------->DEAR3(1)  --------->AHL20(1) --------->AHL20(2)             <---------MYB52(1)   gttatctttcgccctcctaaatttataacaatatataatatactgctaaaaaatatataaaacttcttatattagtaatccgatatgttggttaaataaa  22802600                                                                              <---------YAB1                                                                        <------MYB46(1)                                                                        <------MYB83                                              ------>NtERF2             <---------MYB46(3)                                              --------->LBD16          <---------AtMYB61                                             <---------ANAC46         <--------P                                     --------->YAB1                  <---------ANAC58                                   <---------YAB1                    <---------ANAC58           -----                                   --------->AHL20(2)               <---------MYB46(3)          -----          --------->YAB1           <---------AHL20(2)               --------->ATHB12           <-----         --------->ICU4           --------->TOE2(3)               <---------WOX13(1)         <------- -->AHL20(1)                      --------->YAB1               <---------AHL20(2)            <------- ---AHL20(2)             --------------->AtSPL8----------->GT1 --------->AHL20(2)           --------- -->AHL20(2) --------->YAB1  <-------TEIL   <---------LBD16   --------->AHL20(2)            <--------   ataaaactgaaataatcatatttagtctaggtacaatattaataacgccgggtttaaaaaatcatttaattggttggtttatgagtaagacagcattatt  22802700                                                                              --------->ATHB51                                                                              -------->ATHB1                                                                              <---------ICU4                                                                              --------->ATHB12                                                                             --------->ICU4                                                                             --------->AHL20(2)                                                                             <---------ATHB51                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          --------->AHL20(1)                                                                         <---------AHL20(2)  <---------ZAT6                                                      <---------ICU4 ---->ATHB51                                                         --------->ICU4 ---->ATHB12                                                         --------->AHL20(2) ----YAB1     <---------AHL20(2)                                     <---------AHL20(2) -HAHB4  <---------ARR11(3)                                          <---------ATHB12    <---------AHL20(2) --ICU4  --------->ARR11(3)                                 <----------DOF2  <---------AHL20(2) >ICU4  --------->YAB1                               <-----------GT1 <---------ATHB51   --------->AHL20(2) -YAB1 <---------YAB1                <---------ARR11(3) <----------DOF2  --------->AHL20(2)  <-------   attggtgttatgatatttcattgttttttgtgtttgcaagttctaatttttgttttttctttcttttgcaaataattaaattattgtatatttaatactc  22802800                                   --------->ANAC58                                   --------->ANAC46                                   --------->ANAC58                                  <-------MYC3                                  ------->MYC3                                  ------->MYC2                                  <-------MYC2                            ----------->HVH21                         --------->ANAC58                         --------->ANAC58                         --------->ANAC46                        ------->MYC3                  <---------AHL20(2)                        <-------MYC2                  --------->AHL20(2)                        <-------MYC3 <------NtERF2    <---------AHL20(1)                        ------->MYC2------>NtERF2 <---------ICU4                       <----------ID1                       --------->ANAC58        --------->YAB1                        <---------ICU4              <------ZmHOX2a(1)  --------->ANAC46 <--------HAHB4                   <---------AHL20(2)            <---------TOE1(3)    --------->ANAC58 --------->YAB1    ----------------->AGL2      --------->ICU4   --------->ANAC58     <----------DOF2<---------AHL20(2)     --------->YAB1 ----------->GT1       --------->ANAC46     --------->TOE2(3)       <-----------------AGL1 --ICU4     <---------TOE2(3)    --------->ANAC58<---------ATHB12   <-----------------AG        -----   acatagtaaaaattaaggaaataacacgcgctaacacgcgcctcaactttaatcattttatttattcaaaccccatttcggaaataaaaatgacaaaaaa  22802900                                                                                       <---------CCA1(2)                                                                                       ---------->ID1                                                                                     <---------ANAC58                                                                                     <---------ANAC58          ----------->GT1                                                   <----------DOF2        <------ZmHOX2a(1)                                                 ---------->ID1 ----->DOF2       ----------->GT1    *TSS     ------>ZmHOX2a(1)    <----------DOF2<----------DOF2   aagaagaagaggaagaaaaacagcaaaaacgtctactcttctctcatcctcgcgcttgctctctcttctcttttttgtctttccctttcgtctctctatc  22803000                                                                                --------->TOE2(3)                                     --------->ANAC58                           --------->YAB1                        <-----------GT1                             <---------ARR11(3)              <---------ANAC58       --------->ANAC46               <---------ARR14(2)              <---------ANAC58       --------->ANAC58               --------->ARR14(2)       --------->WOX13(1)         --------->MYB46(3)                <---------GLK1(2)     <---------YAB1 <---------AHL20(2)   --------->HSFC1(2)--------->YAB1 <-----------GT1   tgtctgtatcattcattcgtgtttatttacaatcgaaccacgaaacgtctcttcttctctataaaaaccagatttttctcaatctcaatctctctcgctc  22803100                                                                                                    <                                                                                                    -                                                                                                -----                                                                                             --------                                                                                             --------                                                                 --------->GLK1(1)           <-------                       <----------DOF2                       --------->LBD16                 <-------                   ------->TEIL   <---------ICU4            --------->LBD16            <-------------               --------------->AtSPL8                      <---------HSFB2a(2)         --------------           <----------DOF2<-----------GT1              --------->ARR14(2) <------------------------ANAC81   tcgctctcgttttctttgatgaacccttttacttcattcttactcttgataaatccaaattcccgagaaacccatttcatttccttcttctgtttctaga  22803200                                         <---------ARR14(2)                                         --------->ARR14(2)                                        <---------GLK1(1)                                     --------->LBD16                                    --------->ANAC58                                    --------->ANAC46                                    --------->ANAC58                             --------->ANAC58                             --------->ANAC46                             --------->ANAC58                            --------->LBD16                         ===========================HOX2a_HOX2a ---------ARR11(3)       <------ZmHOX2a(2) -------->ARR11(3)       --------->CCA1(2) ----->DOF2             <---------ARR14(2) ->HSFC1(1)             --------->ARR11(3) ->HSFB2a(2)            <---------ARR11(3) --HSFC1(1)             --------->ARR14(2)   ------>ZmHOX2a(1)                                     -- --HSFB2a(2)            --------->AGP1 <----------DOF2                             <----------------- --AGL15        ---------->DOF2    <---------LBD16   --------->GLK1(2)    <---------DAG2<-----------GT1 ->AGL15<----------DOF2--------->GLK1(1)--------->GLK1(1)                 <----------DOF2<-----------GT1   aagacctcttcttttcgataaaccgagatccacgaaacccgcatttcctctcgctaatctattctaaatttcgatactttttttttttttttatcggttt  22803300                                                   <---------ARR14(2)                   <-------TEIL                    --------->ARR14(2)                  --------->CCA1(2)                --------->GLK1(2)                 <---------ARR14(2)         <---------ZAT14                          <----------DOF2        <---------GLK1(1)                   --------->REM1(2)                        <---------DAG2        --------->GLK1(1)                  --------->ALFIN1                     <-----------HVH21    --------->HSFB2a(2)<---------GLK1(2) --------->ALFIN1                    <---------At5g28300 ----->TEIL  --------->LBD16             <---------ANAC46                   <-----------GT1   <------ -------ANAC81   --------->ARR14(2)   <---------TOE1(2)       <---------GLK1(1)<-----------RAV1(1)   gaatctcgagaattccgaagattcagagtctccatagtcgaaggtgtgtagcgaatcgagatgggtttctgtttgatttcactgtcgctttctctgcttt  22803400  Previous    Next  AGI:  At3g61590.1    Description:  HS/HWS (HAWAIIAN SKIRT); ubiquitin-protein ligase. Identical to F-box/Kelch-repeat protein At3g61590 [Arabidopsis Thaliana] (GB:Q9M310); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G15710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39707.1); contains InterPro domain Kelch repeat type 2 (InterPro:IPR011498); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 22802937    to: 22805305    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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