Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ------>MYB83                                   ------>MYB46(1)                                 --------->DEAR3(1)                                --------->DEAR3(2)                      <-----------RAV1(2)                              <---------ARR14(2)       --------->ANAC58 =============================                              --------->ARR14(2)       --------->ANAC58==============================                    <---------ANAC46                   --------->ANAC46<------ZmHOX2a(2)  -----------                    <---------ANAC58                  --------->SPL7  <---------ARR14(2)  ------->GAMYB   --------->ARR14(2)       --------->ANAC58         <---------ALFIN1 --------->ARR14(2) --------->ANAC58   <---------ARR14(2)       --------->ANAC58 --------->AtMYB61   --------->MYB52(1)      --------->ANAC58 -------->YAB1      <---------ANAC58      <-----------GT1      --------->MYB46(3)        --------->MYB46(3)   tttcatattcgaatcgagtctttcgtatacaagaaccgactgattcaccatacccatacgcccaaaccatcggatcagaagattagtggcaacgacagta  22781800    --------->HSFB2a(1)    <---------HSFC1(2)    <---------KAN4(1)                                       <---------ZAT18    --------->HSFC1(2)                                      --------->ZAT14    <---------HSFB2a(1)                                     <---------ZAT14    --------->KAN4(1)    <---------ANAC46            <---------PCF2<---------ATERF1(2)   <---------KAN4(2)   ------>ZmHOX2a(2)             --------->TCP15(1) <------ZmHOX2a(1)   --------->ARR11(3)              --------->ARR14(2)         <---------WRKY18(1) ============================HOX2a_HOX2a             --------->TCP20--------->LBD16  ------>MYB46(1) =============================HOX2a_HOX2a            <---------ARR14(2)        ----------->HVH21 =RAV--------->KAN4(2)<------ZmHOX2a(2)            --------->LBD16 --------->ATERF1(2)  <---------ZAT14 =======HOX2a_HOX2a  <---------ARR14(2)          <---------LBD16 --------->MYB52(1)  ------>MYB83 >RAV1(1)     <----------DOF2                   <---------O2<-------TEIL <---------ARR14(2) <--------   agaggaatgttcttctctttggcgatctcgtagagacggagaagtttatcacgcgggtccggttcactaccggcgaattcaatgaccgactgaagcgcca  22781900                                                                                           --------->bZIP60(2)                                                                                           <---------ANAC46                                                                                           ----------                                                                                          --------->LBD16                                                                                          ------>NtERF2                                                                                          <------NtERF2                                                                                         --------->DEAR3(1)                                                                                        --------->ATERF1(1)                                                                                        --------->DEAR4(2)                                                                                        --------->RAP2.3(1)                                                                                        <------NtERF2                                                                                       <---------RAP2.3(1)                                                                                       ------>NtERF2                                                                                       <---------ATERF1(1)                                                                                       <---------DEAR4(2)                                                                                      --------->ANAC46                                                                                      --------->DEAR3(1)                                                                                      <---------ATERF1(2)                                                                                      --------->RAP2.6(2)                                                                                      <---------DEAR3(1)                                                                                     --------->MYB46(3)                                                                                     --------->DEAR3(2)                                                                                     --------->RAP2.3(1)                                                                               <<<<<<<<<ARR2                 <---------ANAC58                                              <------ZmHOX2a(2)    <                 <---------ANAC58                                              <<<<<<<<<ARR1  -------              --------->ANAC46                                    <---------ANAC58   --------->ERF1 <             <---------LBD16                                      <---------ANAC58  <---------ATERF1(1)           <---------REM1(2)                      <---------HSFB2a(2)    --------->ARR14(2)<---------O2       --------->GLK1(2)                          --------->HSFB2a(2)    <---------ARR14(2)--------->O2 --ID1<---------GLK1(2)                     --------->LBD16    <---------WOX13(1) ------>ZmHOX2a(1) <   aggagagagattcttcacggcgtttcagagactgagacttcgcatccaggtactcgaagaacgagattgctagagaatacgatcctagccgccgcgtgat  22782000                                           --------->ZAT18                                           <---------ZAT18                                   --------->ANAC58                                   --------->ANAC58                                   <----------ID1                                  <-------TEIL                                 --------->LBD16                                 --------->CCA1(2)                            <---------ANAC58                                 --------->ARR14(1)                      <-----------RAV1(1)                                <---------ARR14(2)                     <---------ICU4                                --------->ARR14(2)                     --------->YAB1          ---------->DOF2       --------->ARR11(1)                    <---------ATHB12     <---------ARR14(2)         --------->TOE1(2)                   --------->WOX13(1) ---->OsCBT               >>>>>>>>>TBF1    --------->ZAT14      ------>NtERF2 <---------ANAC46 ---------ANAC46      --------->At4g35610  <---------ZAT14     --------->DEAR3(1) -->ATHB12--------->MYB52(1)  ----------->ARR10              <---------ALFIN1 <---------ANAC58 ---------ANAC58   --------->At4g35610---------->DOF2        <---------ATERF1(1) ---------ANAC58  ------------------------>ANAC81           ----------->HVH21<---------LBD16       <-   ttgcgagaatactaaaggagaagcagaagaagaagatacgacaagcgcacttagcgactcgctcgacgcccaatcatgttgcggggttttttgaagagtt  22782100                                                       <---------WRKY38(1)                                                       <---------WRKY12                                                      --------->WRKY18(1)                                                     <---------PCF2                                                   <---------MYB46(3)                                                  <---------MYB52(1)                                                  --------->ALFIN1                                                <---------ANAC58                                                <---------ANAC46                                                <---------ANAC58                                                <---------MYB46(3)                                                <---------TGA1a                                               <---------DEAR3(1)                                              ------>NtERF2                                             ------>NtERF2                                             --------->LBD16                                     <---                                        <---------GLK1(1)                        <---------ARR14(2)                                        --------->GLK1(1)                       <------ZmHOX2a(1)----                        ------>ZmHOX2a(1)   <---------RAP2.6(2)           <---------LBD16  <---------MYB46(3) ----------GT1        ----------->RAV1(2)  <---------LBD16               --------->MYB52(1)--------->ATHB12   ttcacaaatttgactactacaaattcctggctctccaatttgatttccggccgtgggtcaacatcatatgaaaaacgacggaggaatcgagaatggttga  22782200                      <------NtERF2                     --------->LBD16                     ------>NtERF2                    <---------LBD16                    <---------ANAC46                   <------NtERF2                   <---------LBD16                   --------->ATERF1(1)                  <---------RAP2.6(1)                  <---------RAP2.3(1)                  ------>NtERF2                  <---------ATERF1(1)                  <---------RRTF1(1)                  <---------ERF1                  <---------DEAR4(2)                 <---------DEAR3(1)                 --------->DEAR3(1)                --------->RRTF1(1)                --------->RAP2.3(1)                --------->ATERF1(1)                                             --------->DAG2               ------>NtERF2                                                --------->LBD16               <---------ATERF1(1)                                         --------->LBD16               --------->LBD16                                            <---------LBD16               <---------RAP2.3(1)                                       <---------LBD16              <---------RAP2.3(2)                                        <------NtERF2             <---------LBD16                                       <---------RAP2.6(2)           <---------ARR14(2)                                     --------->RAP2.6(3)          --------->GLK1(1)                                   ---------->DOF2  ---------->DOF2          <---------GLK1(1)                         <---------TOE1(3)   ------>NtERF2 ------At4g35610--------->RAP2.6(1)                 <---------TOE2(3)   --------->MYB52(1)          < ----->At4g35610--------->ERF1      <---------YAB1  <---------TOE1(2)  <---------ALFIN1 <----------ID1   gcagaatataagagttccggcgccgggaaattgatagcatgatactcatcgtctaaggttttgaaaaagacggccaccgggaaaagtgagacgacgaact  22782300                                                                                        ------------>CBF              <---------MYB52(2)                                                       <<<<<<<<<<<<<<              --------->MYB46(3)         <---------ATHB51                            <-----------GT1        <---------ARR14(2)           <---------AHL20(2)                       ------------>CBF  <---------DEAR3(1)                 --------->AHL20(2)                    <----------DOF2       <--- --------->SPL7------->GAMYB --------->PCF2                               --------->TOE2(3)   ------- ---------MYB52(1)       --------->ALFIN1<---------AHL20(2)               --------->TOE1(3)  <-------   ctgttcggcgaattcaacgaacaagaagttgggcccattttaaataatgggcttacacatatttagcccaaataaacctttacaatattacacaatgggt  22782400      --------->AHL20(2)                                      <---------YAB1      <---------AHL20(2)                     <---------At4g35610  --------->YAB1     --------->AHL20(2)                      --------->At4g35610<-----------TBP         <----------DOF2     <---------AHL20(1)                     <---------YAB1   --------->AHL20(1)      --------->GLK1(2)     --------->AHL20(1)               --------->AHL20(2)     <---------AHL20(1)      ------->TEIL     <---------AHL20(2)               <---------AHL20(2)     --------->AHL20(2)      <---------ARR14(2) <<<LFY                               <---------YAB1         <---------AHL20(2)      <---------ARR11(1) ----TEIL                  ------->TEIL  <---------YAB1     --------->AHL20(2)  <------ZmHOX2a(1) ---->GT1 <---------AHL20(2)       <----------DOF2<---------WOX13(1)           <----------ID1 --------AtSPL8 --------->YAB1   <---------At4g35610--------->ATHB12 <-----------GT1 --------->ARR14(2)   acaaaaatttattttttctcataaaactgaacgtgagctttttattatgctgactgattacattatatttataacaaaatgaggacgaatctttattttt  22782500                                          --------->ZAT14                                    --------->AtMYB61                                    <---------MYB111(2)                                    <---------ALFIN1                                    --------->DEAR3(1)                                   --------->MYB46(3)                                            ----                                  ------>NtERF2                                                  <---                                 --------->RAP2.6(2)                                     <-----------GT1              <----------DOF2 --------->ANAC46                                           <---------ICU4            ------>ZmHOX2a(1) --------->ANAC58                                    --------->ANAC58        <-----------GT1       --------->ANAC58                                    --------->ANAC46       --------->YAB1      <---------ATHB12                                       --------->ANAC58    --------->YAB1  <---------AHL20(2) ----------->RAV1(2)                       --------->MYB46(3)   --------->AHL20(2)    --------->WOX13(1)                                      <---------LBD16-----   <---------AHL20(2)  <---------YAB1 ------>MYB83                   --------->ZAT6--------->LBD16   <---------YAB1   --------->AHL20(2)------>MYB46(1)       ------>ZmHOX2a(1) <-----------GT1  ------   ctcatataattatcctctttgttttattaatcaagccaccaccctgaactctgaaatagctcctatggattacactagttttacccgctaataactatcc  22782600          <---------YAB1      <---------ARR11(3)      --------->ARR11(3)     <------ZmHOX2a(1)   <---------TOE2(3)                                                                   <---------WOX13(1) ---------->DOF2                                              <-----------HVH21  --------->ARR14(2) -->ZmHOX2a(1)           ------>MYB46(1)               --------->MYB46(3)        <---------ARR14(2) ------------AGL15       ------>MYB83                ----------->RAV1(1)         ------->TEIL    <--- ---------->AGL15      <---------MYB111(1)  --------->HSFB2a(2)                  --------->GLK1(2) ----------->AGL3      <---------MYB59   --------->CCA1(2) <----------DOF2  ----------->GT1 ------>ZmHOX2a(2)   tattaaaggatttttatttcttcaacctactcaaaatgaagagctacgagaattgcaacagctttgtcactgagaagatggtgaatctgaatgatccatc  22782700  Previous    Next  AGI:  At3g61520.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G28460.1); similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G28370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39647.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 22779892    to: 22782249    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g61530.1    Description:  PANB2; 3-methyl-2-oxobutanoate hydroxymethyltransferase. similar to KPHMT1/PANB1 (KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1), 3-methyl-2-oxobutanoate hydroxymethyltransferase [Arabidopsis thaliana] (TAIR:AT2G46110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39648.1); contains InterPro domain Ketopantoate hydroxymethyltransferase; (InterPro:IPR003700); contains InterPro domain Pyruvate/Phosphoenolpyruvate kinase, catalytic core; (InterPro:IPR015813) Range:  from: 22782417    to: 22784331    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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