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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                         --------->ICU4
                     ------>ZmHOX2a(1) ------>MYB46(1)
                 --------->ARR14(2)    ------>MYB83
            --------->ANAC58         <---------MYB59
            --------->ANAC58    --------->AHL20(2)
            -------->P         <---------ATHB12                                           ----------
    <---------LBD16--------->YAB1    --------->TOE2(3)                                 <-----------HVH21
----->GLK1(2) ------->GAMYB--------->MYB46(3) --------->AHL20(2)   ------->GAMYB     ------>ZmHOX2a(1)
 
ttctatctctggagcaacccaatcctaataaccaataaaacctaatttttaaaatacagaaccaagttaaccccaaaaccaatatttcctcgtcaaagca  22687400
                              <-------TEIL
                           <---------ANAC58
                           <---------ANAC58
                         <---------AHL20(2)
                      --------->ATHB51                                                             -
                      --------->YAB1                                                               <
                      <---------ICU4                                                              <-
                      <--------HAHB4                                                              --
                <---------ARR14(2)                                                              ----
                --------->ARR14(2)                                                             <----
                --------->GLK1(2)                          ----------->RAV1(1)                <-----
    <---------YAB1   --------->ICU4                       --------->MYB46(3)           --------->ARR14(2)
<---------GLK1(2)  --------->TOE2(3)         <-----------GT1           <----------DOF2 <---------ARR14(2)
>DOF2          <---------GLK1(2)            --------->AHL20(2)         --------------------->WRI1 <-
 
gaagattatcagagaacagaatccataattacatgcgttaagagaaattaacttactctcaacaacagtaagggctttggagtcatcgaaaatttgctcc  22687500
                                                                         <---------GLK1(2)
                                                                         --------->ARR14(2)
                                                <------NtERF2        <---------LBD16  <---------ZAT2
                                             <---------LBD16         --------->ATERF1(1)--------->ALFIN1
                                            --------->At4g35610 --------->ALFIN1      --------->ZAT2
                                         <---------At4g35610  --------->ZAT2          --------->At4g35610
   <------MYB83                          --------->At4g35610  <---------ZAT2         <---------ARR14(2)
   <------MYB46(1)                     <---------TGA2(1)<---------At4g35610     ------>NtERF2  -----
 --------->ALFIN1                      --------->bZIP60(1)    <---------At4g35610   <------NtERF2
-------->ZAT2                       ----------->HVH21   --------->At4g35610    <-----------RAV1(1)
---------ZAT2                     --------->ANAC55(2)   --------->ZAT2  <------NtERF2--------->ARR14(2)
--------DEAR3(1)                  <---------ANAC58     <---------ARR14(2)<---------ARR14(2)   <-----
------->ALFIN1                    <---------ANAC46    <------NtERF2  <------NtERF2 --------->LBD16
----->LBD16                       <---------ANAC58  <---------DEAR3(1) --------->LBD16<---------At4g35610
-----HSFB2a(2)      --------->At4g35610<---------bZIP60(1)--------->ALFIN1--------->GLK1(2)  <------NtERF2
----LBD16     <-----------GT1  <----------DOF2 --------->LBD16--------->At4g35610<---------LBD16   <
--------AtMYB61     ------>ZmHOX2a(1)  --------->TGA2(1)<---------ZAT2--------->RAP2.6(2)    -------
 
ggaggtgggttttgaattttctcctctgcaacgtctttcgtgacatcagccggagtcggagctggagctggagccggaatctctgccggagctggagccg  22687600
                                                                               --------->ABI4(1)
                                                                               ------>NtERF2
                                                                               <---------ATERF1(1)
                                                                              --------->DEAR3(1)
                                                                              --------->RAP2.3(2)
                                                                              --------->ANAC46
                                                                              --------->RAP2.6(2)
                                                                              --------->RAP2.3(3)
                                                                              <---------ATERF1(2)
                                                                             --------->DEAR4(2)
                                                                             --------->ERF1
                                                                             --------->RAP2.3(1)
                                       <---------YAB1                        --------->ORA47(2)
                                    --------->GLK1(2)                        --------->ATERF1(1)
    --------->ZAT2                 <---------ARR14(2)                        <------NtERF2
    ----------->RAV1(2)            --------->ARR14(2)                       <---------ATERF1(1)
    <---------At4g35610            <---------GLK1(2)                        <---------ORA47(2)
    --------->At4g35610           --------->HSFB2a(1)                       <---------RAP2.3(1)
   ====================RAV        --------->GLK1(1)                        <---------DEAR3(1)
   <-----------RAV1(1)           ----------->ARR10                 --------->LBD16
<---------ARR14(2)              <------NtERF2                      ------>NtERF2
------->TEIL                 <---------LBD16                      --------->ANAC58
--------->ARR14(2)      --------->TOE1(3)                         --------->ANAC46
---->LBD16 <-----------RAV1(2)--------->DEAR3(1)                  --------->ANAC58
----DEAR3(1)            --------->TOE2(3)       --------->ANAC58  --------->DEAR3(1)   --------->At4g35610
---------CCA1(2)       <---------HSFB2a(1)      --------->ZAT6   <---------LBD16<------NtERF2
-->ATERF1(1)  <------ZmHOX2a(1)--------->LBD16  --------->ANAC58------>ZmHOX2a(1)      <---------At4g35610
 
gtgtatctgctggagcaggagtcgtaaccttcgccggagattctgattctaacgctatcttctgttcctccgccatagtcgccgcctctcagccgaagaa  22687700
                                                               --------->MYB52(1)
                                                               ----------->RAV1(1)
                                                              *TSS
                                                            --------->ANAC46
                                                            --------->ANAC58
                                                            --------->AtLEC2     --------->ANAC55(1)
                                                            --------->ANAC58     --------->ANAC46
                                                   <---------AHL20(2)            <---------ANAC55(2)
                      --------->AHL20(2)           <---------YAB1                --------->ANAC55(2)
               >>>>>>>>>MYB2--------->ANAC58     <---------RVE1(1)       ----------->GT1
        ---------->DOF2     --------->ANAC58    <---------ARR11(3)      --------->ARR11(3)   <------
    <------ZmHOX2a(1) <---------AHL20(2)        <---------ARR14(2)      <---------ARR11(3) ------>NtERF2
   ----------->GT1 ------>MYB83                 --------->ARR11(3)  ---------->DOF2        ---------
  ----------->GT1  ------>MYB46(1) <---------YAB1<---------CCA1(1)------->GAMYB<-----------GT1 <----
 
atagagaggaaaaaagaaaaccaaattaaaaacgaaatatgaaaaattgaagatattatttccaagcaacagaaagatgtttatacgtattagccgcgtt  22687800
                                                                                           <--------
                                                                                       <-------MYC2
                                                                                       ------->PIF5
                                                                                       ------->MYC3
                                                                                       <-------MYC3
                                                                                       <-------PIF5
                                                           =====================================MYC_MYB
                                                           --------->At5g28300         ------->MYC2
                                                           <-------GAMYB              --------->O2
                                                        <---------TOE1(2)             --------->ANAC46
                                                      --------->TOE1(2)               --------->TGA1a
                                                      <---------SPL7                  <---------TGA1a
                          <-----------GT1            ------>ZmHOX2a(2)                <---------O2
                        <---------YAB1             <---------ARR14(2)            <---------ARR14(2)
                      <-----------GT1              --------->ARR11(3)            ------->TEIL
                     --------->AHL20(2)            <---------GLK1(2)             --------->ARR14(2)
                     <---------AHL20(1)            --------->ARR14(2)           <---------CCA1(2)
               <---------MYB59                     --------->AGP1             <---------ANAC58
               --------->TOE2(3)               <---------At4g35610            <---------ANAC58
    <-------GAMYB    <---------AHL20(2)       <-----------HVH21<---------YAB1 <---------ANAC46
   ----------->GT1   --------->AHL20(1) ---------->DOF2------>ZmHOX2a(1)    <---------ANAC46
----DOF2    <-----------GT1            <---------AHL20(2) ----------->GT1<---------MYB46(3)---------
>LBD16      --------->RVE1(1)        <-----------TBP<------ZmHOX2a(2)    <-----------RAV1(1)
------DOF2  --------->CCA1(1)  <---------MYB52(1)  <---------ARR11(3)  <---------MYB52(1)<---------ZAT14
 
tttttggggttaaaaataccttattttattatccgttgatatataaaggcatcagatcctacggttataaatccatttgttgtgtatccacgtgaactgc  22687900
                                                               --------->ANAC58
                                      ===============================bZIP_DOF
                                      ---------->DOF2      --------->ANAC46
                                   --------->ANAC58        <---------O2
                                   <---------ANAC55(2)     --------->ANAC58
                           ------>NtERF2                   --------->bZIP60(2)
                           ----------->RAV1(1)             --------->ANAC58
                           <---------RAP2.6(3)             --------->TGA1a
                          <---------ATERF1(2)              --------->ANAC55(2)
                    --------->ZAT2 --------->ANAC55(2)     --------->ANAC55(1)
    --------->RAP2.6(2)   --------->ETT(2)  --------->At5g28300--------->ANAC58
  --------->At4g35610     --------->ATERF1(2)              <---------ANAC55(2)
  ------>NtERF2     <---------At4g35610     <-------GAMYB  --------->O2                   <---------AHL20(2)
  <---------At4g35610     <---------ETT(1)  =========================MYC_MYB           ----------->GT1
-At4g35610          --------->At4g35610    ----------->GT1 <---------TGA1a          --------->TOE2(3)
>At4g35610          <---------ZAT2 --------->ANAC58   --------->ANAC46            <---------YAB1   <
 
gatgcagccgaacacaaaaattcagcttgccgacagacaggtaatgcggttaaacatatgccacgtaagcaaatgtcaatttgttttcattagtaaattg  22688000
                                    <---------ANAC55(1)
                                    <---------ANAC58
                                    --------->O2
                                    <---------ANAC46
                                    <---------bZIP60(2)
                                    <---------O2
                                    <---------ANAC58
                                 ----------->HVH21
                           ---------->DOF2
                           ===================bZIP_DOF                                       -------
                      <---------SPL7<---------TGA1a                                          -------
                     --------->ETT(1)                                                      <--------
                   <-----------HVH21--------->TGA1a     --------->ETT(2)            --------->bZIP60(1)
                  <-----------RAV1(1)             --------->ANAC58                  <---------bZIP60(1)
              <---------AHL20(2) ----------->TGA1 --------->ANAC46               ----------->HVH21
              --------->AHL20(2)<-----------HVH21 --------->ANAC58 --------->ARR14(2)    --------->ANAC46
           --------->YAB1--------->ANAC58    ----------->ARR10     <---------ARR14(2)    --------->ANAC58
          <---------AHL20(2)   <---------ANAC58--------->ARR14(2)  --------->ARR11(3)    --------->ANAC58
      --------->AHL20(2) --------->ANAC58  <------ZmHOX2a(1)       <---------ARR11(3)  <---------ALFIN1
      <---------AHL20(2)--------->SPL7--------->ALFIN1  <---------ETT(2)    <---------MYB46(3)
-----------GT1--------->YAB1   <---------ANAC58<---------ARR14(2)----------->ARR10  --------->PCF2
 
tttttctgtttaaataataatatgtcggacgaaagcgtgacgtggaggaagacacgctggagacagataagatactgagttgttgtgaccccacgcactc  22688100
               <---------YAB1
     ------->PIF5
     ------->MYC3                           <---------ANAC58
     <-------MYC3                           --------->TGA1a
     <-------PIF5                           <---------TGA1a
     ------->MYC2                           <---------O2
     <-------MYC2                           <---------ANAC58
    <---------ANAC58                        <---------ANAC55(2)
    <---------ANAC46                        <---------bZIP60(2)
    <------NtERF2                   --------->REM1(2)
    <---------ANAC58              ------->MYC3                                     --------->YAB1
   ------>NtERF2                  <-------MYC3                       --------->ATHB12
  <---------ANAC58                <-------MYC2                 <---------MYB59    <-------TEIL     <
  <---------ANAC46                ------->MYC2    --------->LBD16    <---------AHL20(2)   <---------
  <---------ANAC58               <---------ANAC46<---------ANAC58   <---------AHL20(2)    ==========
-->ANAC58     <-----------GT1    <---------ANAC58<---------ANAC58   --------->AHL20(1)    <---------
-->ANAC58--------->ARR14(2)      <---------ANAC58<---------ANAC55(1)--------->AHL20(2)    ----------
-ALFIN1  <---------ARR14(2) <------ZmHOX2a(1)    <---------ANAC46   <---------AHL20(1)<---------GLK1(2)
 
tattggcgcgtggatattatccatgtttgtaggagcgcgtgtataagacgtgccgtataagatgggcctaatttattgggctcgattcatattctttatt  22688200
               --------->CCA1(2)
               <------ZmHOX2a(2)
               ==========================HOX2a_HOX2a
              <---------ARR14(2)                                                       --------->At5g28300
              <---------ARR11(3)                                                       --------->LBD16
              --------->AGP1                                                          ----------->GT1
              --------->ARR14(2)                                                      <---------ANAC55(2)
              --------->ARR11(3)                                               --------->CCA1(2)
          ---------->DOF2                       ---------->DOF2                --------->ARR14(1)
         <------ZmHOX2a(1)                     XXXXXXXXXXXXXXXXXXXXX>MIR393A/B<---------ARR14(2)
         =============HOX2a_HOX2a  <---------ARR14(2)          ------>ZmHOX2a(2)<-------TEIL
---------TOE2(3)   ---------->DOF2 --------->ARR14(2)  --------->ZAT14        --------->ARR14(2)
-DOF2  <---------TOE2(3)    ----------->HVH21--------------->AGL15            <---------GLK1(2)
=============================================================MADS_MADS        --------->ARR11(1)
------AGL15 <---------HSFB2a(1)   <------ZmHOX2a(1)    <---------ZAT14     --------->LBD16
----->AGL15 --------->HSFB2a(1)   ====================================HOX2a_HOX2a     <---------ANAC46
 
tagaggtttttaggaaagatccaaaagctatctgacaggatttgttttccaaaaagactaaactgatccaaactactccgagattcgctccgtaaataca  22688300
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AGI:  At3g61260.1   
Description:  DNA-binding family protein / remorin family protein. similar to DNA-binding protein, putative [Arabidopsis thaliana] (TAIR:AT2G45820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39554.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75437.1); contains InterPro domain Remorin, C-terminal region (InterPro:IPR005516); contains InterPro domain Remorin, N-terminal region (InterPro:IPR005518)
Range:  from: 22686213    to: 22687763    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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