Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------AHL20(2)                          -----                                                    <---------YAB1                              -----                                                <---------MYB52(1)          <-----------GT1    ------                                               --------->LBD16       --------->GLK1(2) --------->ANAC58                       <---------ALFIN1      <---------LBD16         ------->TEIL      --------->ANAC58 <-------TEIL         --------->ANAC46 <---------ATHB12           <---------ATHB12   --------->At4g35610   gcatacatagcaagaaggccattcaccacattaacatccaaatcaaacccggtttttattgtatgcccatgaatctgttcacctctcagaagcaaaacaa  22651800                                         <------MYB46(1)           --------->TOE1(2)            --------->MYB59           --------->TOE2(3)   <---------ZAT18    --------->ZAT18            <---------ZAT14                                             <---------    <-------TEIL               --------->ZAT18                                             <---------DAG2    <---------ZAT18       ---------->DOF2<------MYB83                                  --------->REM1(1) ---->ANAC58      --------->ZAT6       <---------MYB55(1)                     <---------AHL20(2) ---->ANAC58     --------->ZAT18      <---------MYB52(1)                      --------->AHL20(2)   <- --->TOE1(2)------>ZmHOX2a(1)  --------->ZAT14                 <---------GLK1(1)---------->DOF2    --   gcgaagtacacatcctaagaacactacccaaagtgtactcgttaggttttattccatcagactgcatttcccaaaacaaattaaaagcttcaactttact  22651900                                                             --------->ANAC58                                  <------ZmHOX2a(1)          --------->ANAC58                                --------->LBD16        <--------P                               <---------LBD16 <---------ZAT14    --------->DAG2                               <---------HSFB2a(2)    <-------GAMYB -DOF2         --------->LBD16 <-----------RAV1(2)    <---------ANAC58 --------HSFB2a(2)             --------->HSFB2a(2)    <---------ANAC58<----------DOF2     <------NtERF2 ------->HSFB2a(2)  --------->CCA1(2)          --------->ZAT14   ---------->DOF2   ---------->DOF2   tccagacttgcaatacccagagataagagcattccaggagattgtattcttcactgggttgctacgaaaaagcttttctgcatcagaaagtcgccttgaa  22652000                                                                            --------->MYB46(3)                                                                    ------>NtERF2              --------->YAB1                                        <------NtERF2<---------ETT(1)             <------ZmHOX2a(2)                                     <---------ZAT18           --------->YAB1                                         <---------ANAC58           ------->GAMYB                                          <---------ANAC46      --------->ARR14(2)          --------->MYB46(3)                                      <---------ANAC58  -----------------        --------->MYB52(1)                                       <<<<<<<<<E2Fd   ----------->HVH21     --------->ANAC46                                            <---------LBD16--------->DEAR3(2)<--     --------->ANAC58     --------->AtLEC2         <---------AHL20(2)  <----------DOF2  <---------ARR14(2)     --------->ANAC58   <---------ANAC46 <-----------HVH21       <<<<<<<<<E2Fc  --------->MYB46(3)---   ttcgagtaagcaacgatcatcgtgttccatgtaaactcatccctctcaggcattttatcgaacatttggcgggcttcatcgacccgaccagatttagaca  22652100                                                              ------>MYB83                                                              --------->MYB52(1)                                                              ------>MYB46(1)                                                             --------->MYB55(1)                                                            <---------MYB59                                                            --------->MYB46(3)                                                            <---------MYB111(2)                                                            <---------MYB46(2)                                                            <---------MYB55(2)               <-------TEIL                                 <---------MYB111(1)              --------->CCA1(2)                             --------->AtMYB61             <---------GLK1(2)                            -------->P              <------NtERF2             --------->ARR14(2)                         <---------MYB55(2)       ------>NtERF2             --------->ARR11(1)                         <---------MYB111(1)    --------->RAP2.3(1)             <---------ARR14(2)       --------->At4g35610------->GAMYB ---------->DOF2           ----------->ARR10        --------->YAB1      <---------MYB111(2)    --------->ATERF1(1) >AGL2---------->DOF2      <-------TEIL                 <---------MYB52(2)    <---------ATERF1(1) -------ARR14(2)        <---------HSFC1(2)              --------->MYB46(3)   <---------DEAR3(1) ------>ARR14(2)        --------->HSFC1(2)    --------->At5g28300----------->GT1--------->RAP2.6(2)   aatctcccaaaagcagattcgagtgaagcttcgttctatcagcatagctgtgaatacaactaccaaacggtttcaaaggaaggcgccattttctgtagtt  22652200                                                                                             --------                                                                                             --------                                                                                             --------                                                                                         --------->CCA1(2)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                     <---------TOE2(3)                                        <----------DOF2  ----------->RAV1(1)         <---------ANAC46           <---------YAB1      <-----------GT1          <----------ID1              <---------LBD16           --------->ANAC46----------->TBP           --------->ANAC58         <---------TOE1(3)       <----------DOF2   <---------AHL20(2)          --------->ANAC58         <---------TOE2(3)     <---------ZAT18     --------->AHL20(2)   <----------DOF2    --------->AHL20(2) <----------------   caatctgtgcattacgacagagccaaattatatatactctctctttcactttcacaagacaacaaaataaaacacttgttaaggtttacggatacaagac  22652300                                    <---------ALFIN1                                 <---------PCF5                                 <------NtERF2                                 --------->PCF2                                 --------->ATERF1(1)                                <---------ATERF1(1)                                <-----------TCP11(1)                                ------>NtERF2                               <---------DEAR3(1)                              --------->SPL7              <----------TaMYB80<---------DEAR3(2)              <---------KAN4(1)--------->ATERF1(2)                              --------->ZAT6      <<<<<<<<<SARD1          --------->ATERF1(1)                             <-----------GT1      <<<<<<<<<CBP60g       --------->DEAR3(1)                  ---------->DOF2<---------TOE2(3)     ------>MYB46(1)       --------->ANAC58--------------->AtSPL8       <---------AHL20(2)     ------>MYB83          --------->ANAC58<---------------AtSPL8 ----------->GT1--------->TOE2(3)   <---------MYB59         --------->MYB46(3)            --------->YAB1 <---------AHL20(1) ->ANAC46    --------->ARR14(2)--------->RAP2.6(2)     --------->AHL20(2)<---------AHL20(2) ->ANAC58    ---------->TaMYB80--------->DEAR3(1)----------->RAV1(1)--------->AHL20(2) ->ANAC58    <---------ARR14(2)<---------ATERF1(2)  --------->TOE2(3)   --------->AHL20(2) -------TaNAC69(2)  <------------CBF----------->RAV1(1)<---------AHL20(2)--------->AHL20(2)      ----   aaataccaaatttcgaatatgccattgccacggccggcccacagttttgtacaacattaaaataacaaaagtaaattatttaacattagattaagttgat  22652400                                           <---------WOX13(1)                                    <---------ANAC58                                   --------->STY1(2)                                   <---------STY1(2)             --------->AHL20(2) <---------ANAC58            <---------YAB1      <---------ANAC46                     --------->YAB1         <---------YAB1     <------------CBF ----------->GT1    ------------>CBF         --------->TOE1(3)       ----------->GT1<---------AHL20(2)  <------------CBF    <---------ZAT6    ----------->GT1    <-    --------->DAG2   --------->AHL20(2)  --------->ATHB12   <---------ANAC58   --------->DAG2      --   ---------->DOF2 --------->TOE2(3)<---------ANAC58        <---------ANAC58  ---------->DOF2    <--- ----->AHL20(2)  <---------YAB1 <---------ANAC58 <---------ARR11(3)  --------->AHL20(2)  --------->TOE2(3)   taaaaaaaagtgtgattatatcattaaatctattgcttgctagtaattggtgatatttggatgagtgtcaataaaaaaaaaaaagtaaaaaccttaagac  22652500                                                                                        --------->GLK1(1)                                                                                        <---------GLK1(1)                                                                                    <---------HSFC1(1)         <---------AHL20(2)                             ----------->GT1             <---------HSFB2a(2) --------AHL20(2)              <---------AHL20(2)     ---------->DOF2               --------->HSFC1(1) ------->AHL20(2)     <---------MYB46(3)       ------->TEIL                        <---------LBD16 -------DOF2      <-----------RAV1(1)    --------->ALFIN1         --------->MYB46(3)--------->HSFB2a(2)   tttaatttgattttttttttttgttggatgtattgaatttggagtgatgcatttttcaaagtaaaataacaaacaaacaatagtttctggaaatcgatgg  22652600                                                                                  <---------YAB1                                                                                <---------AHL20(2)                                                                               <---------AHL20(2)                      <-------TEIL                                          --------->AHL20(2)                 <-----------GT1 <---------TOE1(3)                         <---------YAB1             <---------AHL20(2)  <---------TOE2(3)                      --------->AHL20(1)             --------->AHL20(2)  <---------YAB1                         <---------AHL20(2)       --------->ANAC58       --------->ICU4       --------->ANAC58     <---------AHL20(1)       --------->ANAC46    --------->AHL20(2)      --------->ANAC46<---------AHL20(1)       --------->ANAC58 ------->TEIL               --------->ANAC58--------->AHL20(2)            ----       --------->AtLEC2<---------AtLEC2    --------->ICU4          <---------AHL20(2)    <---------YAB1   <-----------GT1   --------->AtLEC2    ---------->DOF2 <----------DOF2--------->AHL20(2)   ------>ZmHOX2a(2)   acatttaacatgcaattttttacatgcatgtaattaagattagaaaagattgcaagaaacttttgctattttattttattatttattgttgatgatcgtt  22652700  Previous    Next  AGI:  At3g61170.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT2G27610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24377.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 22649666    to: 22652212    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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