Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ---------->DOF2   ------>ZmHOX2a(2)  <------ZmHOX2a(2) <---------ARR14(2) --------->ARR14(2) <---------AGP1 <---------ARR11(1) <---------ARR11(3)                    ------>ZmHOX2a(1) ---------ARR14(1)                     ==============HOX2a_HOX2a ---------CCA1(2)                     --------->TOE1(2)          --------->TOE1(3) ------->LBD16                       ------>ZmHOX2a(2)           <---------------AGL15 ------LBD16                        <------ZmHOX2a(2)            --------->TOE2(3)       ---------->DOF2 ---->MYB52(1)                     --------->ARR14(2)          -------->P     <---------ZAT6 -----At5g28300                    <---------ARR14(2)  <------MYB83          <---------TOE2(3) ------GT1                         --------->ARR11(3)  <------MYB46(1) --------------->AGL15 >ARR11(3)                <-----------HVH21   <------ZmHOX2a(2)------->TEIL  <---------TOE1(3)      < -ARR11(3)      ----------->HVH21  ------->TEIL    <---------MYB46(3)  <---------------AGL15        -   ccggatctaaaagctaaactgacccatatgtccgatggatcctgagagatcgatggatggtgatcaaccttaactagttagggttagaataaaaagacat  22631100                         --------->GLK1(2)                        <---------GLK1(2)                  --------->ANAC58          --------->GLK1(1)         --------->ARR14(2)         <---------ARR14(2)             ------>ZmHOX2a(2)         <---------GLK1(2)            <---------ARR11(3)                            <-----------GT1        --------->At4g35610  <------MYB46(1)                             --------->YAB1        <---------At4g35610  <------MYB83                                ------>ZmHOX2a(2)         <- <----------DOF2  --------->ANAC46    --------->ARR11(3)               --------->ARR11(3)          <- ---------DAG2--------->ANAC46    <---------ANAC58                     <---------ARR11(3)        ---- -------->TOE2(3) --------->ANAC58<---------ANAC58        <---------ATHB12     --------->YAB1    ----   aacctttttcagatacccacaagacagaatttggtttcttgatcttaagaacagacacaaatcaaacatggatgatcttaatcatattacccatgaaaac  22631200                                                         <---------ETT(1)                                                         --------->ANAC46                                                         ----------->HVH21                                                      --------->MYB52(1)         <---------ICU4                               -------->P         <--------HAHB4                               ------->TEIL         --------->ATHB12                          --------->ANAC46        --------->ICU4                             --------->ANAC55(2)        <---------YAB1                          --------->ARR14(2)       <---------------AGL15            --------->ATHB12--------->MYB46(3)       --------------->AGL15   --------->ARR11(3) --------------->AtSPL3      --------->YAB1           <---------ARR11(3) <-------TEIL                            --------->ALFIN1      <-----------------AGL1  --------->YAB1    <---------ARR14(2)                    <------NtERF2      <-----------------AG  <---------TOE2(3)  <---------GLK1(1)                     ------>NtERF2 --------TOE1(2)          --------->AHL20(2)   --------->CCA1(2)                     --------->MYB52(1) --------TOE2(2)          <---------AHL20(2)----------->GT1                    <---------ANAC58 ----->TOE1(2) <------ZmHOX2a(1) ------>ZmHOX2a(2)--------------->AtSPL8       <---------ANAC58 ----->TOE2(2) =========================HOX2a_HOX2a<---------ANAC55(2)       --------->ARR11(3)   ---   ctaggttttcatcattaggaaaaccgaattaatgatcttgaatgaatggatatacgtacccgacattgctgaactcgtagagcttgccaccggtggagaa  22631300                                                                                                -----                                                                                              <------                                                        --------->ANAC58           <---------ANAC55(1)                                                        --------->ANAC58           <---------ANAC55(2)                                                     <---------At4g35610           <---------ANAC58                                                <---------ANAC58                   <---------ANAC46         <---------ARR14(2)                     <---------ANAC58    <----------DOF2<---------ANAC58         --------->ARR14(2)                  <----------DOF2  <---------DAG2       --------->ANAC55(2)  <---------YAB1                         <---------TOE2(2)    <----------DOF2     --------->MYB52(2) ------>ARR11(3)       ---------->DOF2   <---------TOE1(2)--------->MYB46(3)  ----------->GT1 -------   gattatgagagaaacctctgcatcacaaagaacagagagttcgtaggctttcttgagcaaaccactttttcttttggagaaggttacttgtctagtgatc  22631400                                                                                      <---------ARR11(3)                                                                                     --------->RVE1(1)                                                                                <----------DOF2                                                                          <---------ANAC58                                                                          <---------ANAC58 ->ZmHOX2a(2)                                                       <---------MYB52(1)--------->ARR11(3) ---ARR11(3)           <----------DOF2                            *TSS    <---------ANAC46 ---------- -->ARR11(3)        <---------ALFIN1 <---------CCA1(2)      <----------DOF2   ---------->ID1   <-----   ttgttctcaattctcttcacttccactttgcctcttcccatctctcactcgctctctctcttctttctacgttgtttcttgtctttaatatctctcaatg  22631500                                                           --------->TOE2(3)                                                          --------->ANAC55(2)                                                          --------->ANAC46                                                          --------->ANAC58                                                          --------->ANAC55(1)                                                          --------->ANAC58                                                          <---------ANAC55(2)                                                          ----------->GT1                                                         <-------TEIL                                                       <---------ARR14(2)                                                       --------->ARR14(2)                       --------->YAB1                 --------->CCA1(2)                      <---------ATHB12                <---------GLK1(1)            <-----------GT1                    --------->WOX13(1)           <---------ANAC58              <---------AHL20(2)             <-------TEIL                    <------------CBF         --------->DAG2             ------->TEIL    --------->AHL20(2)  <---------ANAC58    ---------->DOF2 --------->ZAT6 -->CBF  <---------------AtSPL8     <----------DOF2  --------->ARR14(2)       --------->ICU4XXXXXXXXX ------RAV1(1)    ------------>CBF  --------->TOE2(3)<---------ARR14(2)       --------->AHL20(2)   <-   ttggaagtttacatgtacatatcaatcaaaatgaattactttagttctattgctggatatacgtaaaaaaaaaaagcgtatttattaaccctatagtttc  22631600                                                                            --------->AHL20(2)                                                                  --------->ARR11(3)                                                                  <---------ARR11(3)                                       --------->TCP20            <-----------ARR10           ------->TEIL       <-------TEIL          --------->TOE2(3)   <---------YAB1 <---------ARR11(3) XXXXXXXXXXX>MIR413    ------->GAMYB   --------->ARR14(2)   <------ZmHOX2a(1)      ---------->DOF2  - ---------DOF2      <-----------GT1    <---------ARR14(2)  <----------ID1--------->YAB1--------->ARR11(3)   tctttttcttatcaacctatttcaaccctacatacatagtggaaccgagttttatctcaataggacaatatctcatcataaattacaaagttctcatttc  22631700                                    <---------ICU4                                    --------->YAB1                                 --------->YAB1                                --------->AHL20(2)              ------>ZmHOX2a(2)           --------->YAB1       <---------AHL20(2)          --------->ICU4   <---------WRKY18(1)     --------->ANAC58      <---------MYB52(1)  ----------->GT1--------->ARR11(3)     --------->ANAC58    <---------ANAC46    <---------ANAC46 <---------ARR11(3)      --------->YAB1     --------->AtLEC2<---------DAG2<---------YAB1      --------->YAB1<-----------RAV1(1) <---------At5g28300 <----------DOF2-------->HAHB4     ----------->GT1 <---------MYB52(1) -------->YAB1    <-----------GT1<---------ICU4<---------ZAT6--------->YAB1 ----------->HVH21 <------   aattaccatgcaagaagaattcactttccgtttattaattatagctagagtgtaaaatggtaatgatcttactgttgtttgacccaaatgaaaattcttt  22631800                                                                                                 ----                                                                                                 <---                                                                                                -----                      <----------ID1                                                          <------                 --------->ATHB12                                                             -------               <---------WOX13(1)                                                             <------            <---------AHL20(2)                                                               --------            --------->AHL20(2)                  =====================================================            --------->AHL20(1)               ------>MYB83                                    <-------        <---------AHL20(2)                   ------>MYB46(1)                               --------->YAB1        --------->AHL20(2)  --------->MYB52(1)  <---------------AGL15              ----------->GT1    <---------AHL20(2)<------ZmHOX2a(1)      -------->P                     <---------PCF5 <---------ICU4 ----DOF2  --------->AHL20(2)               ------>ZmHOX2a(1)  ----------->GT1 <---------ALFIN1 <----   tggtatataaaaaattaattgataggaacaaaacgaaaactttctcctacctagaattagaagtatggaaatacagttggaccactggaaaaatcatcat  22631900     --------->AHL20(2)   <----------DOF2   --------------->AGL15 ----->ATHB51 ------ICU4 ---->ICU4 ---ICU4 -->YAB1                                                                                            - --HAHB4                                                                            ----------->RAV1(1) ->ICU4                                                --------->ANAC58          --------->ANAC58---- ==================MADS_MADS                           --------->ANAC58          --------->ANAC58---- --YAB1                                            --------->ANAC58    <----------DOF2         <----- -----YAB1                         ---------->DOF2 --------->ANAC58 --------->GLK1(2)          ------   tatttcttttaatatcagtatttgatgacatattgttcaaagttcaaactggcactcaagaaaaattgatattcttttttgatatgcaacagttggacca  22632000  Previous    Next  AGI:  At3g61120.1    Description:  AGL13 (AGAMOUS-LIKE 13); DNA binding / transcription factor. Identical to Agamous-like MADS-box protein AGL13 (AGL13) [Arabidopsis Thaliana] (GB:Q38837;GB:Q9M2F0); similar to AGL6 (AGAMOUS LIKE-6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G45650.1); similar to MADS-box protein AGL6-a [Brassica oleracea var. botrytis] (GB:CAD48306.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 22629234    to: 22631466    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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