Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------TOE2(3)                                               <---------TOE1(3)         --------->YAB1                                              ---------->DOF2           <---------YAB1                                          <----------DOF2     <---------MYB52(1)   <---------YAB1                                          --------------->AGL15         <---------ATHB12                                         <---------ANAC46  <-------TEIL --------->ICU4                                         <---------ANAC58--------->TOE1(2)   ---------->DOF2                             --------->At5g28300----------->GT1       --------->YAB1   <-------TEIL   <----------DOF2         --------->ZAT6<---------ANAC58--------->TOE2(2) <---------YAB1   tagaacttttatttcgtcaacaaaatgttacagtaactacattgcttttaaagttaaaacatgcgttatctgtaatcataaaagtatgatacatcgttca  22492500                                                     --------->MYB52(1)                                              ----------->GT1                                         <---------ICU4       --------->ZAT18              ----------->GT1            --------->YAB1       <---------ZAT18             --------->YAB1            <---------ANAC46            <---------ATHB12     --------->ALFIN1            <---------ATHB12   --------->TOE2(3)          <-----------GT1 <---------ANAC55(2)   ----------->GT1    --------->WOX13(1)   aataaacttaaattttgtgtaaaaagttttaaaaacctttcaaacattatgtaaaaaacagaagtggacatagtatatagtctatagttcaatcacaaaa  22492600                                                                                 --------->ICU4                                                                                 <---------YAB1                                                                                --------->TOE2(3)                                                                               --------->ATHB12                                                                               --------->YAB1                                                                              --------->ICU4                                                                              <---------ATHB12                                                                       --------->ANAC58                                                                       --------->ANAC58     <--------           <---------YAB1                                              ----------->GT1   <-----------GT1           <---------TOE2(3)                                        --------->TOE2(3)    --------->YAB1          <-----------GT1                                        <---------DOF5.7(2)     <---------ICU4        --------->AHL20(2)                                     --------->DOF5.7(2)      --------->MYB46(3)     <---------AHL20(2)                                      <---------MYB46(3)<---------ICU4   --------->AHL20(2)                               --------->YAB1<---------TOE1(3)   <---------ICU4   <---------AHL20(2)<---------AtMYB61        <<<<<<<<<<<<<<<<<LFY<---------TOE2(3)--------->YAB1   ctaatataaatttaacattggttttggtcgtctatagtctatacatatggacaatggtcatattggttaacgtaagtaaaatcattagtaatcaccacat  22492700                                   <---------LBD16                               --------->ATHB12                           --------->ICU4                           <---------ATHB12                                                      ----                          <---------TOE2(3)                        <---------ANAC58      ----------->GT1                       <---------YAB1                       --------->MYB46(3)         ---------->DOF2                  ------>MYB46(1)<---------WOX13(1)        ------->TEIL             <---------HSFB2a(2)      --------------->AtSPL8-------->HAHB4              <---------MYB52(2)          --------->HSFB2a(2)      --------------->AtSPL3<---------ICU4           <----------ID1<---------ANAC58 --------->HSFC1(1)      <---------------AtSPL8--------->YAB1         <------ZmHOX2a(1)                --------------->AGL15 --------->YAB1   ------>MYB83--------->ICU4    --------->DAG2--------->MYB52(1)    <---------HSFC1(1) -ALFIN1     --------->ANAC46 <---------YAB1   ---------->DOF2---------->DOF2      <---------LBD16   ctattgtaatcgtacaaaccaaattgttaatgatgattggggaagtggataaaggacgacgaaccaaaggcttgtctgaatttcttctggaaagagaaat  22492800                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                         --------->ATHB12                                                                                         <---------ICU4                                                                                         --------->ATHB51                                             --------->LBD16                             <--------ATHB1                                            <---------LBD16                              -------->HAHB4                                     --------->YAB1                                     <---------AHL20(2)                                --------->AHL20(1)         --------->ZAT14              <---------ATHB51                                --------->AHL20(2)         <------------CBF             <---------YAB1                                <---------AHL20(2)     --------->ZAT6 ---------->DOF2   --------->ICU4                        <----------ID1     ----------->RAV1(2)<-----------HVH21<---------At4g35610 -- ----->AHL20(2)  --------->ALFIN1  --------->AHL20(2) <---------YAB1 *TSS ----------->RAV1(2)      <-   taaaacaaaactaaaatatgtggagagagacaaataaaataatacccctgggacttatcagtattgtcagagcaaagcctgagcttcttaataattgaaa  22492900        --------->AHL20(2)                                          <------NtERF2        <---------AHL20(2)                                          --------->ATERF1(1)        --------->YAB1                                             ------>NtERF2    <---------AHL20(2)                                             <---------ATERF1(1)    --------->AHL20(2)                                            --------->DEAR3(1)    --------->AHL20(1)                                           --------->RAP2.3(1)   --------->AHL20(2)                                            --------->ATERF1(1) -------->AHL20(2)                     --------->RVE1(1)         <------NtERF2 ---------AHL20(2)                    --------->ARR11(3)        <---------RAP2.3(1) --------AHL20(1)                     <---------ARR11(3)        ------>NtERF2  <-----------HVH21 ------->AHL20(2)                     --------->GLK1(2)         <---------ATERF1(1)     ------>ZmHOX2a(1) ------->AHL20(1)         <---------ICU4                       <---------DEAR3(1)    ------>ZmHOX2a(1) --------AHL20(2)       --------->AHL20(2)                     --------->DEAR3(1)--------->ARR14(2)   ataaaattaattaaaacaaaacacataaaaatttctgaaaaatctctctctctctctcttcatcgtcgccgtcgtcttctccgtctcctcctctctgtct  22493000                                                                     ------>ZmHOX2a(2)                                                                 <---------YAB1    ----------->HVH21                                                               --------->YAB1    --------->At4g35610                                                               <---------ICU4    <---------At4g35610                                                              --------->ICU4----------->HVH21                                                            --------->AtMYB61   ------>NtERF2                                                    <---------DEAR3(2)     --------->DEAR3(2)                                      --------->MYB52(1)   --------->MYB46(3)  <---------DEAR3(1)   -                <---------At4g35610--------->ANAC46 <---------MYB46(3)     ------>ZmHOX2a(2)       --          <<<<<<<<<TBF1  <---------YAB1          --------->ARR11(3)<---------ARR11(3)              <- <---------At4g35610  ------>ZmHOX2a(1)          <---------ARR11(3)--------->ARR11(3)            ----   cgctgctacttcttcttcatcttcctgatgaatactcacaaaaccgaagaaggtctgttccaccatcatgatcttgatccgacggctgacatactcgttc  22493100                                --------->AtMYB61       --------->ANAC46     --------->ANAC58                      --------->ANAC58      --------->MYB46(3)    --------->ANAC58                      --------->LBD16      <---------MYB55(2)  <---------ALFIN1                       <---------LBD16     ------>MYB83      <---------ALFIN1                  --------->ARR14(2)     ------>MYB46(1)   --------->DEAR3(1)              <----------DOF2   <---------ALFIN1    --------->AtMYB61             --------->LBD16  --------->GLK1(1)             -   --------->AtMYB61<---------ALFIN1                 <---------TOE1(2)<---------GLK1(1)           ---   --------->DEAR3(1) --------->MYB46(3)            --------->LBD16--------->LBD16               <---  --------->MYB46(3)--------->DEAR3(1)             <---------LBD16<---------HSFB2a(2)            ---- -------->YAB1      --------->AtMYB61            <------ZmHOX2a(2)--------->HSFB2a(2)            <--- ------->MYB46(3)  --------->MYB46(3)           --------->ARR14(2)--------->ANAC58              <---- --------ATHB12  --------->ANAC46               <---------ARR14(2)--------->ANAC46            ------>ZmHOX2a(1) ----->WOX13(1)  <---------ALFIN1        --------->LBD16 <---------ARR14(2)         <---------At4g35610   aatcaccaccctccattctccaccaccaccacgaccacaattccgaagtcgatcccgcgttttctctcccggaattcatactcttccgctcttctccttc  22493200                                                 --------->GLK1(1)                                                 <---------GLK1(1)                                                <---------ARR14(2)         --------->LBD16                        --------->ARR14(2)        <---------LBD16                       --------->ANAC46       <---------LBD16                        --------->LBD16   --------->GLK1(2)                         <---------HSFB2a(2)  <---------GLK1(2)                          --------->HSFB2a(2)  --------->ARR14(2)                        <---------LBD16                                         -  <---------ARR14(2)                   <---------------AGL15                                   <----- --------->HSFB2a(1)                  ----------------->AGL2                               --------->ZAT18 --------->GLK1(1)                    ----------------->AGL1                               --------->ZAT14 ---------->ARR10                  <---------ARR14(2)                                      <---------ZAT14 ------>LBD16             --------->ANAC58 -------->P                                     --------->ALFIN1 ------ANAC46             --------->ANAC58 --------->MYB52(1)                         <---------ANAC58 ----->HSFB2a(2)    <-----------RAV1(2)----------------->AGL1                         <---------ANAC58 ------HSFB2a(2)   ------>ZmHOX2a(1)  <-----------------AGL1                          <---------ANAC46 -----LBD16<-----------HVH21       --------->ARR14(2) --------->LBD16      --------->GLK1(2)   ======   cggagattctcccggtctctcctcagacgagcaagacgattcccttaccggaaacccccaaattgctgattcgtcaaattctagggtttcgagtgcagga  22493300                                                             <---------GLK1(2)                              <---------ARR11(3)            --------->At4g35610                              <-----------ARR10             <---------HSFC1(2)                              --------->ARR11(3)            --------->HSFC1(2)                             <---------CCA1(2)              --------->ZAT2                          ------>ZmHOX2a(1)                 --------->HSFB2a(1)      <-----------HVH21                       <------ZmHOX2a(2)                    <---------At4g35610   <---------At4g35610                      <---------ARR14(2)                    <---------ZAT2    --------->ALFIN1                --------->At4g35610                        ------->TEIL       <-----------RAV1(1)             --------->At4g35610    --------->At4g35610  ------->GAMYB      <---------TGA1a--------->LBD16       <----------DOF2--------->ARR14(2)       <---------ALFIN1             <---------O2  --------->ANAC46 -------->CCA1(2)     <---------GLK1(2)       <---------REM1(2)             --------->O2 <---------LBD16 -ZmHOX2a(1) <---------At4g35610    <---------At4g35610  =============================MYC_MYB       < =============================HOX2a_HOX2a --------->AGP1--------->ANAC46    --------->TGA1a------>NtERF2   agagatgggcttttcatcagccccgatcctcatatctcatctcagttctacacattcaacgcagcttctcactctctcatgtgtcgctgtctccgcgagg  22493400  Previous    Next  AGI:  At3g60850.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO24486.1) Range:  from: 22492869    to: 22495077    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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