Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ANAC58                                                <---------ANAC58                      ---------->DOF2     --------->ATHB12                --------->At5g28300      <---------YAB1             <-------TEIL               <---------ANAC58        --------------->AGL15           <---------ANAC58        <---------------AGL15       -------->HAHB4       ----------------->AGL2       --------->YAB1       ----------------->AGL3      --------->ICU4                              ---------->ID1     ------->TEIL   <---------MYB52(2)<---------YAB1           <---------GLK1(2) --------------->AtSPL8            <---------YAB1     <---------ICU4       --------->ALFIN1 ----------DOF2----------->GT1 --------->ARR11(3)     --------->YAB1   <-----------RAV1(2)   agctttgtacccacatacagtaactaaagcatagataatgatgcttattggcttaataatctcaagaatttcatcaggtttggcctctaaatcaactgtt  22463900                                                          <-----------GT1                                                        <---------WOX13(1)                                               --------->ARR14(2)                                               <---------ARR14(2)               --------->TOE2(3)             --------->HSFB2a(1)             <-----------GT1              <---------ICU4                <---------TOE2(3)        ------>ZmHOX2a(1)        --------->YAB1                      --------->MYB59          --------->LBD16                -  <---------At4g35610         --------->ZAT14<---------HSFB2a(1)   ----------->RAV1(2)     <---------   ttggagcggatgataaacattaatggagaaactatactctctaagtaaggttccactaattgaccttgctcctggtatttatccatctacaatacaacaa  22464000                                                                                           --------->ARR14(2)                                                                                           <---------ARR14(2)                                                                                           <---------                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(3)                                                                                          <---------CCA1(2)                                                                                          <---------ARR14(1)                                                                                        =============                                                                                        ------>ZmHOX2a(2)                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                               --------->SPL7------>ZmHOX2a(2)                                              <------ZmHOX2a(2)              --------->ZAT18 ========                                           <------MYB83                     <---------ANAC58<------ZmHOX2a(2)            ----------->GT1                <------MYB46(1)                  ----------->GT1<---------AGP1          ---------->DOF2                <--------P                   <---------------------WRI1 --------->DOF2 --------->WOX13(1)  --------->TOE2(2)--------->At4g35610    <---------ANAC58========= -ID1  <------NtERF2    <---------YAB1  <---------ANAC46  ----------->GT1  <-----------------------TaNAC69(2)   aacaaagtcggagaaagtaaatcaacatgatactgaaacatgggttggatcaagtagatgaagtcaaaagactaagaagcgtacaatggatcggatctta  22464100                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58                   <---------ALFIN1                --------->MYB46(3)            <------ZmHOX2a(2)               --------->HSFB2a(2) --ARR10  <------ZmHOX2a(1)                 <---------HSFB2a(2) ================HOX2a_HOX2a           <---------YAB1        --------->At4g35610 ================HOX2a_HOX2a          <---------ARR11(3)     --------->ZAT2      --------->RVE1(1) ================HOX2a_HOX2a          --------->ARR11(3)<-----------GT1 ----------->GT1   tgaacagaagtaggatcaacaacacggccatttgaaacaatatcatcgagaagagatttaacgagcttccattcttgtaaaaaatacctctgtagaactc  22464200                                                                        <------NtERF2                                                                       ----------->RAV1(1)    <------                                                                       ------>NtERF2          -------                                                                      ----------->HVH21      --------                                                                     --------->RAP2.3(1)     <-------                                                                     --------->ATERF1(1)     --------                                                                     <------NtERF2           --------                                                                    <---------DEAR3(2)       <-------                                                                    ------>NtERF2  --------->ZAT14                                                                    <---------RAP2.3(1)      <-------                                            ------>NtERF2           <---------ATERF1(1)      --------                                           --------->DEAR3(1)      <---------DEAR3(1)  --------->HSFB2a(2)                                          --------->MYB46(3)     <-----------HVH21 --------->At4g35610                                          --------->DEAR3(2) ==========================HOX2a_HOX2a  <                                         <---------At5g28300 ------>ZmHOX2a(2)     <---------ZAT14  -         --------->YAB1                 <-----------GT1    --------->ARR11(3)   <---------At4g35610 <  ------>ZmHOX2a(1)                  <---------ICU4        <---------ARR11(3)   ------>ZmHOX2a(1)   - --------->TOE2(3)           ------>ZmHOX2a(1)  <---------MYB52(1) <---------At1g77200 <---------HSFB2a(2)   tctccttagaatcatgctcatcgtcttcttcctcttcaatttttaccgccgtttcgatttcgatcttcgtcggcgacatttcctctgctctagatgccat  22464300                                                                                       <---------ETT(2)                                                                                       --------->DEAR3(1)                                                                                    <---------ANAC46                                  --------->LBD16                                   --------->TGA1a                                  ------>NtERF2                                     <---------bZIP60(1)                                  <------NtERF2                                     --------->bZIP60(1)              ----------->GT1    --------->ANAC46                                   <---------O2         ---------->DOF2        --------->MYB46(3)             --------->LBD16      --------->O2   ---------->DOF2              --------->DEAR3(1)            --------->DREB2C(2)   <---------TGA1a ---------AGL15                 --------->SPL7                --------->DEAR3(1)    <---------bZIP60(2) -------->AGL15                <---------ALFIN1               --------->ATERF1(2)  ----------->STF1 --------->AGL2                --------->ATERF1(1)            <---------ATERF1(2) <---------TGA2(2) ----------AGL1               ------>NtERF2                  <---------LBD16     ----------->TGA1 --------->AGL1             <---------LBD16                 --------->MYB52(1)   ----------->HVH21 --------->AG<---------------AtSPL8<------NtERF2           --------->AtMYB61    <-----------HVH21 ----------AGL2       <---------AHL20(2)                   <---------ALFIN1   ------>ZmHOX2a(2) ----------AGL3       --------->AHL20(1)                  <---------ABI4(2)  <------ZmHOX2a(2) --------->AGL3  <-------TEIL--------->ANAC46             <---------MYB55(2)<---------ARR14(2) ---------HSFB2a(2)   <---------AHL20(1)            --------->REM1(2)   <---------ANAC55(2) -------->HSFB2a(2)   --------->AHL20(2)            --------->ZAT14     --------->ANAC55(2) ---------------AGL15<---------ATHB12   --------->YAB1    --------->MYB46(3)--------->ARR14(2) -------------->AGL15--------->AHL20(2)*TSS         <---------ZAT14  <---------ATHB12  <---------DEAR3(1)   tactggaaagagaaaggggttcaataaattcccgcccgccgataatactctcagtgtagaaccaccggcaaatcacgagatcggtgacgtcgacgatgag  22464400                                                                                                <----                                                                                             <-------                        <------------CBF                           ------>MYB83       <------MYB46(1)                       --------->ATHB12                       <-----------GT1        <---------TOE1(2)                       <---------AHL20(2)       <---------------AGL15                <---------AtMYB61                      <---------AHL20(2)        ------>ZmHOX2a(1)  ------>MYB46(1)  <---------MYB52(1)                      <---------AHL20(1)       <-----------------AGL2            <-------TEIL--------                      --------->AHL20(1)      ----------------->AGL1         ------->TEIL    <-------                      --------->AHL20(2)      <-----------------AGL3  ------>ZmHOX2a(1)    ----------                --------->YAB1                <-----------------AGL1 --------->TOE2(3)<------MYB83   tttacatgttaaggcccatagtaatttattgggcctatatacccatgttcctattttgggcctataaccttcctcaatgtagcttcgttggtctagattt  22464500                                            <---------ANAC58                                            <---------ANAC58       <---------ANAC58                   <------MYB83       <---------ANAC58                   <------MYB46(1)      <---------MYB46(3)                <--------P                                                  -   <----------DOF2                    <------MYB46(1)                                              -- -------GT1                           <------MYB83                                           <------- --GLK1(2)                           <---------AtMYB61       <----------DOF2           --------->ANAC58 ->ARR11(3)        <-----------GT1   --------->MYB111(1)------->TEIL   <---------ANAC46--------->ANAC58 --ARR11(3)    --------->YAB1       <--------P         <---------GLK1(2)            <---------KAN4(2) ->ARR10    <----------DOF2   ----------------->AGL1   <---------CCA1(2)           --------->YAB1  --   tccatctttgggtgcttttataaaccggcttaaccagagttggtaggcttgatacttgaatctctttctggttttgtatattcaagaataagcaaacatt  22464600                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                       --------->KAN4(1)                                                                       --------->GLK1(1)                                 --------->AHL20(2)      <---------AHL20(2)                         ------->TEIL            <-----------GT1      ---------->TaMYB80                      <---------ANAC58    --------->AHL20(1)        <------NtERF2                      <---------ANAC58    <---------ARR11(3)       --------->LBD16           <---------DAG2--------->SPL7   --------->ARR11(3)      <---------ANAC46           <----------DOF2 --------->TOE2(3)    <-----------GT1  <---------LBD16                    -     --------->YAB1  --------------->AtSPL3    <---------AHL20(2)<---------------------WRI1        -- ----->ZmHOX2a(1)    --------------->AtSPL8<---------CCA1(1) <---------ICU4                     ----- ------->TOE2(3)     <---------------AtSPL3<---------RVE1(1)<---------YAB1                    *TSS -- --ICU4 <-----------GT1<---------SPL7     <---------AHL20(1)--------->ICU4  ---------->DOF2  -------- ------->TOE1(3)     ---------->ID1   ---------->DOF2------>ZmHOX2a(1)<---------KAN4(2)   -----------   tccttaaaaataactttttttttgtcgtacctcattttaaaaaagatattttatcctatttcattatggcggaatatccaaagaacaaaaaatggtagta  22464700                                                                                      --------->ICU4                                                                                  <-----------HVH21                                                            <-----------GT1      ------->GAMYB                                                      <---------YAB1       --------->CCA1(2)                                                      --------->ICU4       <------ZmHOX2a(2) -------->AHL20(2)                                 --------->WRKY18(1)    --------->ARR11(3) ------->AHL20(2)                      --------->TOE2(3)   --------->KAN4(2)  --------->MYB52(1) ---->YAB1                  --------->ZAT14       <--------ZAP1 <----------DOF2 --------->MYB46(3) ------->YAB1          <------ZmHOX2a(2)       <---------At4g35610        --------->AGP1 --->GT1             <------ZmHOX2a(1) --------->TOE1(3)<---------ARR11(3)<---------ARR11(3) >GT1    ---------->DOF2    <---------ZAT14    --------->At4g35610       --------->GLK1(1)    ------>ZmHOX2a(2)   ataaaaatagcgaaaggcatagaggatcactaaactcttagccttaatcagcggtcaagattataccttttagtgagatccaacggtcatatttgatcca  22464800  Previous    Next  AGI:  At3g60740.1    Description:  TTN1 (TITAN 1). similar to tubulin folding cofactor D, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47868.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24519.1); similar to putative tubulin-folding cofactor [Oryza sativa (japonica cultivar-group)] (GB:AAM94921.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357) Range:  from: 22458220    to: 22464339    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g60750.1    Description:  transketolase, putative. similar to transketolase, putative [Arabidopsis thaliana] (TAIR:AT2G45290.1); similar to unknown [Populus trichocarpa] (GB:ABK95795.1); similar to Transketolase, chloroplast precursor (TK) (GB:Q43848); similar to unknown [Populus trichocarpa] (GB:ABK92500.1); contains InterPro domain Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II; (InterPro:IPR009014); contains InterPro domain Transketolase C-terminal-like; (InterPro:IPR015941); contains InterPro domain Transketolase, N-terminal (InterPro:IPR005474); contains InterPro domain Transketolase, central region (InterPro:IPR005475); contains InterPro Range:  from: 22464694    to: 22468127    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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