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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                --------->ANAC58
              ---------->DOF2
             <-------TEIL
          <---------ANAC55(2)                     =====================HOX2a_HOX2a
          --------->ANAC55(2)                     ------>ZmHOX2a(2)
         <-----------------------TaNAC69(2)     --------->ARR11(3)              --------->GLK1(2)
         <---------------AtSPL8                 <---------ARR11(3)             <---------GLK1(2)
         --------------->AtSPL8             <---------AtLEC2                 ----------->ARR10
         <-------TEIL                       --------->YAB1           <---------ANAC46             <-
         --------------->AtSPL3           --------->AtLEC2       <---------ARR14(2)               <-
    --------->AHL20(2)               <---------ZAT18             --------->ARR11(3)        ---------
 <------ZmHOX2a(1)        --------->GLK1(2)<-------TEIL          --------->ARR14(2)        ---------
 ----------->GT1--------->ANAC58     --------->ZAT18            <------ZmHOX2a(1)          <--------
----------->GT1 --------->ANAC46   <---------------AtSPL8     <---------TOE2(3)--------->ARR11(3) <-
 
agtaggataaaatacgtacaagcaatacaaatctagtaagtgtacatgcatgatcttcaattcttgaggattttgtgggaaagattctgaaaactgtact  22364500
                                                     <-------TEIL
<---------MYB46(3)                                 <-------MYC3
--------ANAC58                            --------->ANAC58
--------ANAC58                            --------->ANAC58---------->DOF2  --------->ZAT2        <--
>ZAT14  --------->KAN4(2)        --------->ZAT6    ------->MYC3            <---------ZAT2       <---
>ZAT18 <---------KAN4(1)        <---------YAB1     ------->MYC4            <---------At4g35610  ----
-ZAT14 --------->KAN4(1)     <---------AHL20(2)    ------->MYC2            --------->At4g35610------
--------ANAC46               --------->AHL20(2)    <-------MYC2    <---------ICU4          <--------
 
ggcttgttgaatattctaaatctaaaatacaatttatcagtaagtaagcaaacatgtgcgtcaaagttaatctttccaagctgaaacaacaattgctgag  22364600
    --------->DAG2                                                               <---------------AGL15
   ---------->DOF2                                         --------->AHL20(2)    --------------->AGL15
 <---------AHL20(2)                                   --------->AHL20(2)       <-----------GT1
-------RVE1(1)                                     ----------->GT1             ---------->ID1
------ARR11(3)                 --------->TOE2(3)  ----------->GT1       <---------TOE2(3)
----->ARR11(3)              <----------DOF2     ---------->DOF2      <---------WOX13(1)     --------
----->ARR10            <---------WOX13(1)   --------->ANAC46       --------->ATHB12<----------DOF2
-ANAC46              --------->ATHB12     --------->ANAC46--------->AHL20(2)  <-----------GT1
 
atattaaaaagttcaacatactactcattgactttcttaacatttacaccaaaaagataaaataaaaaactcattgacgtttttccctttgaagttagta  22364700
                                                                                                  --
                                                                                             -------
                                                                                            --------
                                                                                       <---------O2
                                                                                       --------->O2
                                                                                       --------->bZIP60(1)
                                                     <---------AHL20(2)                <---------bZIP60(1)
                                                    <---------AHL20(2)                 =============
                                                    <---------AHL20(1)                 <---------TGA1a
                                                    --------->AHL20(2)                 --------->TGA1a
                                                <---------YAB1                     --------->DEAR3(2)
             <---------ARR11(3)                <---------AHL20(2)            --------->CCA1(2)    --
             --------->ARR11(3)                --------->AHL20(2)           <---------AHL20(1)    <-
   --------->DAG2                              <---------AHL20(1)           --------->AHL20(1)    --
  ---------->DOF2                             --------->YAB1                <---------AHL20(2)  ----
->MYB52(2) <---------YAB1              <---------CCA1(2)                 --------->AHL20(2)<--------
 
gcccaaaaagcatcaagataatgtctgtaagcccatgggcttatatccattataattttttttgtcaaataacaaataatatatgaaacgacgtcggtaa  22364800
             <---------MYB52(1)
         ------>NtERF2
        --------->ANAC46
        --------->DEAR3(1)
        <---------DEAR3(1)--------->HSFB2a(2)
    --------->DEAR3(2)    <---------HSFB2a(2)
------->ZAT2--------->LBD16
---->HVH21<------NtERF2  ------>ZmHOX2a(2)                                 --------->TOE2(2)
->At5g28300<---------DEAR3(1)  --------->ANAC58                         --------->ARR14(2)
===========================MYC_MYB                                    --------->LBD16
------->At4g35610  <-------GAMYB                                     --------->ANAC46
--------At4g35610 <---------MYB46(3)                      <---------HSFB2a(2)                    <--
--------->RAV1(2) --------->MYB52(2)                <---------At5g28300 <---------ARR14(2)    ------
----->MYB46(3) <---------MYB46(3)       <----------DOF2   --------->HSFB2a(2)         --------->ANAC46
-DEAR3(2)<---------RAP2.3(1)   --------->ANAC58    <-----------GT1   --------->HSFB2a(2)      ------
 
cagctgaaacgacgccggtgtttgttgatccagaacgacagcgtttttagttattcaccctctcgaatttttccgaaacctgtgttttcccatcaccaag  22364900
                    *TSS
                 --------->REM1(2)
              <---------ANAC46
             <------NtERF2
             --------->ATERF1(1)
            --------->ABI4(1)
           --------->ANAC46
           --------->RAP2.3(2)
           --------->RAP2.3(3)
           --------->RRTF1(3)
           --------->DEAR3(1)                                                     <---------ALFIN1
           <---------DEAR3(1)                                                    <------NtERF2
          --------->ATERF1(1)                                                   ------>NtERF2-------
          --------->RAP2.3(1)                                                  --------->RAP2.6(2)
          --------->ERF1                                                       <---------ATERF1(2)
          --------->DEAR4(2)              <------NtERF2                        --------->DEAR3(1)
--------DOF2------>NtERF2  <---------At5g28300                                 --------->ATERF1(2)
>MYB46(1) --------->ORA47(2)    <---------MYB46(3)                            <---------RAP2.6(2)
>MYB83   <---------ATERF1(1) <-----------RAV1(1)     ----------->GT1        <-----------GT1  <------
 
ctttctctgaatcgccgccgtgtttacatttactgttgttaaggccgagagatagatagaaaaaaacatctgtgcgattttgccgcctctccctaaaatc  22365000
                                                                                      <------MYB83
                                                                                      <------MYB46(1)
                                                                                     --------->MYB111(1)
                              ------------------------>ANAC81                        --------->MYB59
       ------>ZmHOX2a(1)   --------------->AtSPL8                                    <--------------
  --------->At4g35610      <---------------AtSPL8                                    --------->MYB46(2)
  <---------At4g35610      --------------->AtSPL3                                   <---------MYB55(1)
  <---------GLK1(1)   <---------DEAR3(1)        ---------->DOF2                     <--------P
  --------->GLK1(1)  <------NtERF2       ---------->DOF2                           <---------MYB52(1)
-->ARR11(3)         --------->LBD16  ---------->DOF2                      <----------DOF2      <----
---ARR11(3)       <---------LBD16   --------->AHL20(2)                <---------CCA1(2)  <-------TEIL
 
tttggagctccttcgtagttagccggaggtgaagtacaataaaagaaagaagaaagtccaagtgtctcttctcatctcttttctccagtaggtacgtttt  22365100
     <-----------GT1
<---------AHL20(2)                                                      <--------P              <---
-AtSPL3                                                         <----------DOF2      <---------YAB1
-----AtMYB61                                             --------->ATHB12 --------->At4g35610   ----
 
ggtttaatttacagagttgattctaagcctaagagaaggttttctatcgattagagtgtttgatttgctgtaagggttgctcaaagttttgatttttagt  22365200
                                                       <---------TOE2(3)
                                                      <---------DOF5.7(2)
                                                    --------->DOF5.7(2)
                                                   <-------GAMYB     <---------LBD16
                                                  <---------ZAT6    <---------ANAC58
                          <---------ARR14(2)   <---------WRKY18(1)  <---------ANAC58        <-------
                          --------->ARR14(2)  --------->WRKY12      <---------ANAC46        <-------
                        ----------->ARR10     --------->WRKY38(1)  <-------TEIL             --------
        <---------At4g35610                 <-------GAMYB ---------->DOF2                   --------
   <---------ZAT6  <---------ANAC46        <---------MYB46(3) --------->AHL20(2)<-------GAMYB
------ZAT14   --------->MYB52(1)          <---------AtMYB61 ----------->GT1    <---------ANAC58
----->ZAT14 --------->ARR11(3)         --------->ALFIN1<---------TOE1(3)       <---------ANAC58
 
ttactagtgatagcagataatggaggggagattggctaatatgtggaggttgactgttaacgaaagtaaattcgtggaaactgcgttgcaatctgagctc  22365300
                       <---------ICU4
                      <---------YAB1
                    --------->YAB1                                                            ------
                   <---------YAB1                                                             ------
               <----------DOF2                                                                <-----
               --------------------->WRI1                                                     <-----
        <---------ANAC58                  <---------YAB1  <---------ZAT18            <---------ARR11(1)
--ZAT2  <---------ANAC58                  <---------TOE2(3)                         <---------MYB52(1)
--At4g35610   <----------DOF2       <---------YAB1        --------->ZAT18         <---------ANAC58
->At4g35610  <---------ANAC46 --------->ANAC58     --------->ANAC58               <---------ANAC58<-
->ZAT2  <---------MYB46(3)    --------->ANAC58     --------->ANAC58     <---------YAB1  <----------DOF2
 
agagtagatggtcgtggcctttatgattatcgcaagcttactattaagtttggcaagtaagtgctcatagaactgcttattgatgccgtttcttttctgc  22365400
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AGI:  At3g60500.1   
Description:  CER7 (ECERIFERUM 7); 3'-5'-exoribonuclease/ RNA binding. similar to RRP45A (RIBONUCLEASE PH45A), 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] (TAIR:AT3G12990.1); similar to RRP45A (RIBONUCLEASE PH45A), 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] (TAIR:AT3G12990.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN74356.1); contains InterPro domain Exoribonuclease, phosphorolytic domain 1; (InterPro:IPR001247); contains InterPro domain Exoribonuclease, phosphorolytic domain 2; (InterPro:IPR015847)
Range:  from: 22364921    to: 22367560    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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