Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
---------->
DOF2
<-------
TEIL
<---------
ANAC55(2)
=====================
HOX2a_HOX2a
--------->
ANAC55(2)
------>
ZmHOX2a(2)
<-----------------------
TaNAC69(2)
--------->
ARR11(3)
--------->
GLK1(2)
<---------------
AtSPL8
<---------
ARR11(3)
<---------
GLK1(2)
--------------->
AtSPL8
<---------
AtLEC2
----------->
ARR10
<-------
TEIL
--------->
YAB1
<---------
ANAC46
<-
--------------->
AtSPL3
--------->
AtLEC2
<---------
ARR14(2)
<-
--------->
AHL20(2)
<---------
ZAT18
--------->
ARR11(3)
---------
<------
ZmHOX2a(1)
--------->
GLK1(2)
<-------
TEIL
--------->
ARR14(2)
---------
----------->
GT1
--------->
ANAC58
--------->
ZAT18
<------
ZmHOX2a(1)
<--------
----------->
GT1
--------->
ANAC46
<---------------
AtSPL8
<---------
TOE2(3)
--------->
ARR11(3)
<-
agtaggataaaatacgtacaagcaatacaaatctagtaagtgtacatgcatgatcttcaattcttgaggattttgtgggaaagattctgaaaactgtact
22364500
<-------
TEIL
<---------
MYB46(3)
<-------
MYC3
--------
ANAC58
--------->
ANAC58
--------
ANAC58
--------->
ANAC58
---------->
DOF2
--------->
ZAT2
<--
>
ZAT14
--------->
KAN4(2)
--------->
ZAT6
------->
MYC3
<---------
ZAT2
<---
>
ZAT18
<---------
KAN4(1)
<---------
YAB1
------->
MYC4
<---------
At4g35610
----
-
ZAT14
--------->
KAN4(1)
<---------
AHL20(2)
------->
MYC2
--------->
At4g35610
------
--------
ANAC46
--------->
AHL20(2)
<-------
MYC2
<---------
ICU4
<--------
ggcttgttgaatattctaaatctaaaatacaatttatcagtaagtaagcaaacatgtgcgtcaaagttaatctttccaagctgaaacaacaattgctgag
22364600
--------->
DAG2
<---------------
AGL15
---------->
DOF2
--------->
AHL20(2)
--------------->
AGL15
<---------
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
-------
RVE1(1)
----------->
GT1
---------->
ID1
------
ARR11(3)
--------->
TOE2(3)
----------->
GT1
<---------
TOE2(3)
----->
ARR11(3)
<----------
DOF2
---------->
DOF2
<---------
WOX13(1)
--------
----->
ARR10
<---------
WOX13(1)
--------->
ANAC46
--------->
ATHB12
<----------
DOF2
-
ANAC46
--------->
ATHB12
--------->
ANAC46
--------->
AHL20(2)
<-----------
GT1
atattaaaaagttcaacatactactcattgactttcttaacatttacaccaaaaagataaaataaaaaactcattgacgtttttccctttgaagttagta
22364700
--
-------
--------
<---------
O2
--------->
O2
--------->
bZIP60(1)
<---------
AHL20(2)
<---------
bZIP60(1)
<---------
AHL20(2)
=============
<---------
AHL20(1)
<---------
TGA1a
--------->
AHL20(2)
--------->
TGA1a
<---------
YAB1
--------->
DEAR3(2)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
CCA1(2)
--
--------->
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(1)
<-
--------->
DAG2
<---------
AHL20(1)
--------->
AHL20(1)
--
---------->
DOF2
--------->
YAB1
<---------
AHL20(2)
----
->
MYB52(2)
<---------
YAB1
<---------
CCA1(2)
--------->
AHL20(2)
<--------
gcccaaaaagcatcaagataatgtctgtaagcccatgggcttatatccattataattttttttgtcaaataacaaataatatatgaaacgacgtcggtaa
22364800
<---------
MYB52(1)
------>
NtERF2
--------->
ANAC46
--------->
DEAR3(1)
<---------
DEAR3(1)
--------->
HSFB2a(2)
--------->
DEAR3(2)
<---------
HSFB2a(2)
------->
ZAT2
--------->
LBD16
---->
HVH21
<------
NtERF2
------>
ZmHOX2a(2)
--------->
TOE2(2)
->
At5g28300
<---------
DEAR3(1)
--------->
ANAC58
--------->
ARR14(2)
===========================
MYC_MYB
--------->
LBD16
------->
At4g35610
<-------
GAMYB
--------->
ANAC46
--------
At4g35610
<---------
MYB46(3)
<---------
HSFB2a(2)
<--
--------->
RAV1(2)
--------->
MYB52(2)
<---------
At5g28300
<---------
ARR14(2)
------
----->
MYB46(3)
<---------
MYB46(3)
<----------
DOF2
--------->
HSFB2a(2)
--------->
ANAC46
-
DEAR3(2)
<---------
RAP2.3(1)
--------->
ANAC58
<-----------
GT1
--------->
HSFB2a(2)
------
cagctgaaacgacgccggtgtttgttgatccagaacgacagcgtttttagttattcaccctctcgaatttttccgaaacctgtgttttcccatcaccaag
22364900
*
TSS
--------->
REM1(2)
<---------
ANAC46
<------
NtERF2
--------->
ATERF1(1)
--------->
ABI4(1)
--------->
ANAC46
--------->
RAP2.3(2)
--------->
RAP2.3(3)
--------->
RRTF1(3)
--------->
DEAR3(1)
<---------
ALFIN1
<---------
DEAR3(1)
<------
NtERF2
--------->
ATERF1(1)
------>
NtERF2
-------
--------->
RAP2.3(1)
--------->
RAP2.6(2)
--------->
ERF1
<---------
ATERF1(2)
--------->
DEAR4(2)
<------
NtERF2
--------->
DEAR3(1)
--------
DOF2
------>
NtERF2
<---------
At5g28300
--------->
ATERF1(2)
>
MYB46(1)
--------->
ORA47(2)
<---------
MYB46(3)
<---------
RAP2.6(2)
>
MYB83
<---------
ATERF1(1)
<-----------
RAV1(1)
----------->
GT1
<-----------
GT1
<------
ctttctctgaatcgccgccg
tgtttacatttactgttgttaaggccgagagatagatagaaaaaaacatctgtgcgattttgccgcctctccctaaaatc
22365000
<------
MYB83
<------
MYB46(1)
--------->
MYB111(1)
------------------------>
ANAC81
--------->
MYB59
------>
ZmHOX2a(1)
--------------->
AtSPL8
<--------------
--------->
At4g35610
<---------------
AtSPL8
--------->
MYB46(2)
<---------
At4g35610
--------------->
AtSPL3
<---------
MYB55(1)
<---------
GLK1(1)
<---------
DEAR3(1)
---------->
DOF2
<--------
P
--------->
GLK1(1)
<------
NtERF2
---------->
DOF2
<---------
MYB52(1)
-->
ARR11(3)
--------->
LBD16
---------->
DOF2
<----------
DOF2
<----
---
ARR11(3)
<---------
LBD16
--------->
AHL20(2)
<---------
CCA1(2)
<-------
TEIL
tttggagctccttcgtagttagccggaggtgaagtacaataaaagaaagaagaaagtccaagtgtctcttctcatctcttttctccagtag
gtacgtttt
22365100
<-----------
GT1
<---------
AHL20(2)
<--------
P
<---
-
AtSPL3
<----------
DOF2
<---------
YAB1
-----
AtMYB61
--------->
ATHB12
--------->
At4g35610
----
ggtttaatttacagagttgattctaagcctaagagaaggttttctatcgattagagtgtttgatttgctgtaagggttgctcaaagttttgatttttagt
22365200
<---------
TOE2(3)
<---------
DOF5.7(2)
--------->
DOF5.7(2)
<-------
GAMYB
<---------
LBD16
<---------
ZAT6
<---------
ANAC58
<---------
ARR14(2)
<---------
WRKY18(1)
<---------
ANAC58
<-------
--------->
ARR14(2)
--------->
WRKY12
<---------
ANAC46
<-------
----------->
ARR10
--------->
WRKY38(1)
<-------
TEIL
--------
<---------
At4g35610
<-------
GAMYB
---------->
DOF2
--------
<---------
ZAT6
<---------
ANAC46
<---------
MYB46(3)
--------->
AHL20(2)
<-------
GAMYB
------
ZAT14
--------->
MYB52(1)
<---------
AtMYB61
----------->
GT1
<---------
ANAC58
----->
ZAT14
--------->
ARR11(3)
--------->
ALFIN1
<---------
TOE1(3)
<---------
ANAC58
ttactagtgatagcag
ata
atggaggggagattggctaatatgtggaggttgactgttaacgaaagtaaattcgtggaaactgcgttgcaatctgagctc
22365300
<---------
ICU4
<---------
YAB1
--------->
YAB1
------
<---------
YAB1
------
<----------
DOF2
<-----
--------------------->
WRI1
<-----
<---------
ANAC58
<---------
YAB1
<---------
ZAT18
<---------
ARR11(1)
--
ZAT2
<---------
ANAC58
<---------
TOE2(3)
<---------
MYB52(1)
--
At4g35610
<----------
DOF2
<---------
YAB1
--------->
ZAT18
<---------
ANAC58
->
At4g35610
<---------
ANAC46
--------->
ANAC58
--------->
ANAC58
<---------
ANAC58
<-
->
ZAT2
<---------
MYB46(3)
--------->
ANAC58
--------->
ANAC58
<---------
YAB1
<----------
DOF2
agagtagatggtcgtggcctttatgattatcgcaagcttactattaagtttggcaa
gtaagtgctcatagaactgcttattgatgccgtttcttttctgc
22365400
Previous
Next
AGI:
At3g60500.1
Description:
CER7 (ECERIFERUM 7); 3'-5'-exoribonuclease/ RNA binding. similar to RRP45A (RIBONUCLEASE PH45A), 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] (TAIR:AT3G12990.1); similar to RRP45A (RIBONUCLEASE PH45A), 3'-5'-exoribonuclease/ RNA binding [Arabidopsis thaliana] (TAIR:AT3G12990.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN74356.1); contains InterPro domain Exoribonuclease, phosphorolytic domain 1; (InterPro:IPR001247); contains InterPro domain Exoribonuclease, phosphorolytic domain 2; (InterPro:IPR015847)
Range:
from: 22364921
to: 22367560
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version