Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                              ------>ZmHOX2a(1)                                                                                            =========                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)             ---------->DOF2                --------->ANAC46                               ==========         -------->P                       <---------ALFIN1                                 ==========         ------>MYB46(1)            ------->MYC3                                          ------->TEIL         ------>MYB83               <-------MYC3                                     <---------AtLEC2      --------->MYB46(3)            ------->MYC2                                 <---------ANAC46----   --------->ZAT18                  <-------MYC2                     <<<<<<<<<<<<<<<<<LFY --------->ARR14(2) ------P----------->RAV1(1)        <----------TaMYB80                >>>>>>>>>>>>>>>>>LFY <---------ARR14(2)   gtaagtgaaccaacaagaagcagtaatgtcattaagcatatgccctactccatagaagaagacagaccatcttccaatgggttttgtgaatggatcctcc  22196900         <---------MYB52(1)                    --------->DAG2                                <-------        --------->LBD16                       ---------->DOF2    --------->WOX13(1)          <-------      <---------LBD16                    --------->LBD16       <---------ATHB12              --------     ------>ZmHOX2a(1)                  --------->LBD16<---------ARR14(2)              --------->ANAC58 -------ALFIN1                         --------->LBD16 --------->ARR14(2)       --------->GLK1(1) ===========HOX2a_HOX2a                <---------LBD16 <---------ARR11(3)   --------->LBD16  -------- ===========HOX2a_HOX2a   --------------------->WRI1   --------->ARR11(3) --------->TOE1(2) <-------- ===HOX2a_HOX2a        ------->GAMYB  <---------LBD16 <------ZmHOX2a(1) ------->TEIL   --------->ANAC58 -->ZmHOX2a(1)        --------->MYB46(3)--------->ANAC46    <---------AHL20(2)  <---------GLK1(1)  <-   tcacttcctccggtcattttctcaaccgcttcgaaattttccccggaataaagtgaggatttttaatcaatctggacctgggaaacccctagcaataaat  22197000                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                 --------->CCA1(2)                --------->AGP1        ================HOX2a_HOX2a        =================HOX2a_HOX2a       --------->TOE2(3)                                                         --------->AHL20(2) --AHL20(2)     <---------AGP1                                        ---------->DOF2 --AHL20(1)     --------->ARR11(3)                                   <---------------AGL15 ->AHL20(1)     <-----------ARR10                        <---------At4g35610 <------ZmHOX2a(1)    --- ->AHL20(2)     <---------ARR11(3)      ---------->DOF2  --------->At4g35610----------->GT1  <------- -ATHB12------>ZmHOX2a(1) <---------At4g35610--------->CCA1(2)     --------->TOE1(3)        <-------- --------YAB1--------->YAB1     --------->YAB1 ----------->GT1     --------->TOE2(3)    <------ZmHOX2a(1)   tatcaaactcctcaataagatctaattgagctaatcagaaacaaaagagatgaaaattgagctatcaaaccctaaatcaggaaaaaaataggaactttca  22197100                                                   ---------->DOF2                                              --------->ICU4    <-----------HVH21 <---------HSFB2a(2)                     ----------->GT1       <----------DOF2 ------>AGP1      ----------->GT1       <---------------------WRI1        --------->ANAC46 ----HVH21       ----------->GT1        <------ZmHOX2a(1)    --------->At4g35610 --DOF2      <------ZmHOX2a(1)     ----------->HVH21       <------ZmHOX2a(1)                ---------   gacctagaaaacagaggaaggggaaattttcaaacccatgaaggagtaaaaatcaaaggaaggagctttcacatacccagaatcaacttcaaatgaaagc  22197200                                  --------->ANAC58                                  --------->ANAC58                            --------->TOE2(3)                            --------->TOE1(3)                  ---------->DOF2                      --------->ANAC46                     ----------->GT1         ----------->GT1                 ------>ZmHOX2a(2)--------->ANAC46  ---------->DOF2    ----------->GT1     <---------YAB1  --------->YAB1  ----------->RAV1(1)  ----------->GT1 ---------->DOF2 ->DOF2     <---------WOX13(1)  ---------->DOF2   --------->LBD16     <------ZmHOX2a(1)   ccttgtgatgagagattgatctataagaaacctcaaaagcaacaatttctcccccaaaggagggaaaaagaaggagtaaagaagacagagaaaaacttgt  22197300                                                       <---------ANAC55(2)                        --------->TOE2(3)       --------->TOE2(3)                            --------                    --------->AtMYB61           <-----------TGA1                  <----------DOF2                   <---------MYB52(2)          --------->ANAC58                  <---------DAG2       --------->ZAT14  --------->TOE1(3)      --------->ANAC46                <---------ARR11(3)       --------->ZAT18 --------->ZAT6          --------->bZIP60(2)             --------->ARR11(3)  --       <---------ZAT18-------->P               --------->ANAC58           --------->TOE1(2)  --------     *TSS       --------->ZAT14      <----------DOF2--------->ICU4      ------->TEIL   <----------DOF2   ttcatattgagcactctctccactaaccctaactaatacctttcttccaacgtcattatgtgagtcattctatgaacataagaccttttcttttaccttg  22197400                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  <--               <---------AHL20(2)                                                                 ---               <---------AHL20(1)                                                      <---------DEAR3(2)               --------->AHL20(1)                                                     <---------DREB2C(2)         --------->YAB1                                                              --------->DDF1--        <---------YAB1                                                  <---------ATHB12          <--      <---------ZAT6                                                  --------->GLK1(1)<---------MYB46(3)    ----------->GT1                                        <---------ARR14(2)      --------->O2   --- ->TOE1(3)     --------->ARR11(3)                          --------->ARR14(2)      <---------O2   <-- ------->AHL20(2)                                         <------ZmHOX2a(1)    <---------RAP2.6(3)<-- ->TOE2(3)  --------->AHL20(2)                         <-----------RAV1(2)     <-----------HVH21  ---   aaaaaatagtattataaaatattggaaattgaagtgatcagagagtgaatgagagaggcaggatagtctgagaaatcatgcggtcatgtcggtttcattt  22197500              <---------ANAC58              <---------ANAC46              <---------ANAC58      <------MYB46(1)      <------MYB83  --------->ARR14(2)  <---------GLK1(2)  <---------ARR14(2) -------->LBD16<----------DOF2 --------HSFB2a(2) ------------->AGL15 --------------AGL15 ---------------AG -------------->AGL2 ------->HSFB2a(2) ---------------AGL3                                                    <---------YAB1 -------------->AGL3                                                --------->ARR11(3)         <----- ---------------AGL2                   <---------YAB1               --------->GLK1(2)       --------- ---------------AGL1           --------->HSFB2a(2)                 <---------GLK1(2)       <---------GLK1(2) -------------->AGL1        <----------DOF2         <------ZmHOX2a(2) --------->YAB1<-----------HVH21   tccagatttggttatggcttttatgggtgacttttggaattttgtttgcaagggatcagttaatggatagaatcttgatagcaatttgtcagagattctt  22197600                          --------->At4g35610                          <---------At4g35610              <---------AHL20(2)             <---------AHL20(1)                                                                     <             <---------AHL20(2)                                                                     -       ----------->GT1--------->ANAC46                                                             <-   --------->DAG2     --------->ANAC58                         <----------DOF2             ----------  ---------->DOF2     --------->ANAC58                 ------->GAMYB                     --------->YAB1 -----DOF2   --------->AHL20(2)                       --------->ANAC58                   --------->AHL20(2) >GLK1(2)   --------->ICU4<---------ZAT2              --------->ANAC58                   <---------AHL20(2)   ttaaaaaagttgtaatttttttgcaggcaactggaatctactactaaacgcttgtaacgcccatactttcattagataagaaaacaaacaattaaaagct  22197700                                             <---------ANAC46                                             <---------ANAC58                                             <---------ANAC58             <---------YAB1              <---------ANAC58         >>>>>>>>>ARR1                   <---------ANAC58       <-----------RAV1(1)         >>>>>>>>>ARR2             --------->AHL20(1)         ------->MYC3        --------->ATHB12           --------->AHL20(2)         <-------MYC2   <----------DOF2                 <---------AHL20(2)         <-------MYC3 ---------ARR11(1)                 <---------AHL20(1)         ------->MYC2                       <--- -------->ARR11(3)            ------>ZmHOX2a(1)    --------->ANAC46                              ---- --------CCA1(2)             --------->TOE2(3)   <-----------------AGL1           --------->AHL20(2) >DOF2 <---------YAB1    <----------DOF2 <---------ANAC46   <-------TEIL          <---------AHL20(2)   caaatctttatgattgtgattttctcactttccttattttattgcttgcttacacgagaaggcacgttgttgcagcatcaacatttaaaatgccactaaa  22197800  Previous    Next  AGI:  At3g60070.1    Description:  lactose permease-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G44280.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G44280.1); similar to C19orf28 protein, related [Medicago truncatula] (GB:ABN08122.1); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196) Range:  from: 22194220    to: 22197305    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version