Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  ---                                                                                                  ---                            <------ZmHOX2a(2)                                                     <--                <---------YAB1            --------->MYB52(1)                                      <--              ------>ZmHOX2a(2)         <---------MYB52(2)                                        ---            --------->ARR11(3)       --------->ZAT18                      ---------->DOF2        <---  --------->ANAC46         --------->ARR11(3)                           --------->YAB1      ------>ZmHOX2a(1)  --------->ANAC58         <---------ARR11(3)                        --------->WOX13(1) <-----------GT1  --------->ANAC58  ---------->DOF2  <---------ZAT18         ---------->DOF2         <---------GLK1(2) --->DOF2   <---------ARR11(3)  ---------->DOF2    ---------->DOF2--------->GLK1(2)<---------ATHB12--   gaacacgagacattgatcttgataaagaagatcagaaagcacactaacgtcgaaaaagaaaactaaagaatcattcaaaagcccattgattctccttacg  22174100                                                    <---------ARR14(2)                                                    ------->TEIL                                                    --------->ARR14(2)             ------>ZmHOX2a(1)                      <-----------ARR10    ------>ZmHOX2a(1)                            --------->ANAC58 ------->HSFB2a(1)                               --------->ANAC58                      ----------->RAV1(1) ---->TEIL------>ZmHOX2a(1)                   --------->ZAT18                    <-----------HVH21 ------>GLK1(2)                               <---------ZAT14                 <---------ICU4       -- ---------ARR10                               --------->ZAT14     <---------ANAC58   <---------At4g35610 -------ARR14(2)                              <---------ZAT18     <---------ANAC58   --------->At4g35610 ------>ARR14(2)  ----------->GT1   ------>NtERF2--------->ANAC46--------->MYB52(2) --------->ANAC46- ------GLK1(2)<---------LBD16  --------->HSFB2a(2)  --------->GLK1(2)       --------->ARR11(3)     -- ------->GLK1(1)--------->LBD16<---------HSFB2a(2) <---------GLK1(2)       --------->YAB1   <--------   aatctcctcttcctcctccggtgtaaaatcgttctcgatgccaagaagtgcacgaatctcgtctggtttcttgccagtgatcatgtcagcaacagtttgg  22174200         --------->ANAC58         --------->ANAC58        --------->WOX13(1)       ---------->DOF2      --------->ANAC55(2)      --------->WRKY18(1)  --------->MYB59                                                         <-     <-----------HVH21     <---------TOE2(3)                                                    ----- ------->GAMYB--------->ARR11(3)                  --------->TOE2(3)        --------->LBD16 ---------- ------->ANAC58            <---------TOE1(3)--------->YAB1                <---------HSFB2a(2)<------- -------->MYB46(3)    <---------YAB1       --------->At4g35610            --------->HSFB2a(2)-------- ------->ANAC58  <----------DOF2           <------NtERF2          ------>NtERF2  <---------RAP2.6(3) -MYB52(1)    <---------ARR11(3)       ------>NtERF2 ---------->DOF2 --------->HSFB2a(1)------->TEIL   caaccaaggtcaagcaggtcttttatgtttaggtaattcgcagccagcataacatcaaagagagtcgacgactgttccagggccttcatgaactcagcgt  22174300                                       --------->YAB1                                ----------->GT1                                <---------MYB46(3)                                <------MYB46(1)                                <------MYB83                               --------->MYB46(2)                               --------->MYB55(2)                               <---------MYB46(3)                               <---------DEAR3(1)                               --------->MYB111(2)     <---------ANAC58                              <--------P               <---------ANAC58                              <---------MYB55(1)       <---------ANAC46                    ------>ZmHOX2a(1)                              <---------MYB52(1)    <---------CCA1(2)             <------ZmHOX2a(1) --------ALFIN1              <-------GAMYB        --------->ALFIN1           <---------HSFB2a(2) ---->PCF2                   <---------MYB52(1) <---------O2                 --------->HSFB2a(2) >CDC5                      <---------MYB46(3)  --------->O2         ====================HOX2a_HOX2a --At4g35610                <---------DEAR3(2)  <---------bZIP60(2)  =============================HOX2a_HOX2a ->At4g35610    <----------DOF2<---------AtMYB61<---------ANAC46     <------ZmHOX2a(2)   ----------->RAV1(2)   cccacttcttgagttcgtctttgctctcttcggttggtgaatcagaaacgacgtgtttcttgcaatactcgatcaccttcgagaggatgactcctgtaac  22174400                             --------->YAB1                            <---------ATHB12                       --------->ANAC46                       --------->ANAC58                       --------->ANAC58                      <------NtERF2                     ------>NtERF2  --------->WOX13(1)               ------>NtERF2                     <---------ATERF1(1)                       <---------PCF5                  <-----                    <---------RAP2.3(3)                       <---------ZAT14                 <------                    <---------RAP2.3(2)--------->YAB1         ----------->HVH21     -----------------                    <---------DEAR3(1)<---------ATHB12   ----------->HVH21 <----------DOF2  <--------   gtttgcgatagggactccattggcgacgcaatcgtcttcaatcatatgtgctatcgtctgtgactggaccgcgactgcttcttcgacctggaaagattca  22174500                                                            <------NtERF2                                                          --------->ALFIN1     --------->GLK1(1)                                    <---------DEAR3(1)     <---------GLK1(1)                                 <-----------RAV1(1)     --------->At4g35610                               <---------AtMYB61     <---------At4g35610                             <-----------RAV1(1)     --------->ZAT2 ------->GAMYB                <---------------AGL15     <---------ZAT2--------->MYB46(3)            <----------DOF2    <-----------ARR10                            --------------->AGL15 ------GT1       <-----------GT1                <-----------------AGL3 -TEIL      ----------->RAV1(1)                ---------->ID1                                    ---- ---->WRI1--------->At4g35610                 <-----------GT1   <----------DOF2                 <---- -GLK1(2) <---------At4g35610             <----------DOF2 <---------ANAC46                      -----   ccatcggagctcagcaacataaccatcttcgacatcgtttccttcttttttctttttgtggtggcgatttttgtttacaaggttttcgatgatggagaga  22174600                                                                                         --------->TOE2(3)                                                                                         <---------MYB59                                                                                         --------->TOE1(3)                                                  <---------ANAC58                      -------------             <-----------TBP                      <---------ANAC58                      <------------       --------->ALFIN1                          <---------ICU4                        <-------------       <---------ANAC46                  <---------DEAR3(2)                            <-------------    --------->DAG2           <------------CBF   <---------YAB1   <---------ICU4       <-----------GT1  ---------->DOF2           ------>MYB46(1)  <---------YAB1     --------->ICU4      <---------AHL20(2) ----->GLK1(1)              ------>MYB83 <------MYB83  <---------DAG2              --------->YAB1 -----ARR11(3)            <---------MYB59----------->GT1      --------->YAB1   <---------YAB1  ------ ---->ARR11(3) <---------AHL20(2)        <------MYB46(1)<----------DOF2      <-----------GT1---------   tatcaaaaggtgtgtatttatagagagacctaattgtgagagtcggtataattcttgccttttttcataatggatgaaattactattttaacctaaaagg  22174700                                                                                                <----                                                                                                <----                                                                                             --------                                                                                           --------->GLK1(2)                                                                                           <---------ARR11(1)                                                                                           <---------ARR14(2)                                                                                           <---------                                                                                           --------->ARR14(2)                      ============================HOX2a_HOX2a                         --------->CCA1(2)                      ------>ZmHOX2a(1)                                               <------ZmHOX2a(2)      <---------MYB52(1)                                                             <---------ARR14(2)     <---------At4g35610                            <------------CBF                 --------->ARR14(2)     <-------GAMYB   --------->TOE2(3)           ------------>CBF                    --------->AGP1     --------->At4g35610    --------->LBD16------>ZmHOX2a(2)                        --------->At4g35610 ---->AG            --------->YAB1       ------->TEIL                          --------->GLK1(1)----- ---AGL15         ------>MYB46(1)        --------->ARR11(3)               --------->DAG2   ------->TEIL ----AG           ------>MYB83           <---------ARR14(2)              ---------->DOF2  <---------ARR14(1) ----AGL1       --------->AtMYB61        <---------AGP1          --------------->AtSPL3------>ZmHOX2a(2) ----->GT1     ------------>CBF       <---------WOX13(1)  ------>ZmHOX2a(2)    <---------GLK1(1)----- ->DOF2  <---------ANAC46 <---------LBD16--------->ARR14(2)      --------->MYB59   ----------->ARR10   aaaattcagttgagtaaaccaatcctaaaccgggtttttgatggatctagtcccaattgatctaatttcggtacaaaaaggaaatcagatccgaatctac  22174800    <---------ICU4   --------->ICU4 --------->YAB1               --------->YAB1             ------>MYB46(1) -----ANAC58                <------------CBF             ------>MYB83     <----------ID1 -----ANAC58        ------------>CBF                    ----------->RAV1(1) ->TOE2(2)    <----------DOF2 ----------->GT1         --------->MYB46(3)  ----------->GT1       ----- --ARR10 ------->TEIL    ------------>CBF          <---------ZAT14      ---------->DOF2         <---- ---->ANAC55(2)     --------->AHL20(2)             --------->ZAT18 ----------->GT1    ----------->GT1 ---->O2--------->MYB52(1)<---------YAB1    <-----------GT1   ---------->DOF2    --------->AHL20(2)   gtgtcataatgaacggctctaattcaatacaattgtaacaagagtttaacgagtgaaccaacaaaaaagaggtaaaaagaaaaaaaaatggaaactttct  22174900                                                    --------->ARR11(3)                                                    <---------ARR11(3)              <----------TaMYB80                   --------->RVE1(1)             --------->ARR14(2)                    --------->CCA1(1)             <---------ARR14(2)                >>>>>>>>>>GT-3b         ------->MYC3                       --------->ANAC58         <-------MYC3                       ----------->GT1                              ---------->DOF2      <---------ANAC55(1)               --------->ANAC58                            ---------->DOF2 ----------->GT1         <---------AHL20(2) --------->ANAC58                 --------->YAB1        -- ---->HSFB2a(2) <-----------GT1         --------->ANAC58                   --------->AtLEC2       --- -----HSFB2a(2)--------->KAN4(2)      ---------->DOF2                     --------->WOX13(1)     ----   aaaacgttacatgtgtatattccatattttaaaaaactccgaaagcaagaaaaatatctacaaattttgtttatgtcattcaaaacaaaagaaaagaaga  22175000  Previous    Next  AGI:  At3g60010.1    Description:  ASK13 (ARABIDOPSIS SKP1-LIKE 13); protein binding / ubiquitin-protein ligase. similar to ASK11 (ARABIDOPSIS SKP1-LIKE 11), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT4G34210.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85607.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072) Range:  from: 22174071    to: 22174535    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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