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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
--------->
AHL20(2)
-------->
YAB1
-------->
AHL20(2)
-->
TOE2(3)
-->
TOE1(3)
--->
GT1
->
ANAC58
->
ANAC58
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
<---
-->
AtSPL8
--------->
AHL20(2)
--------->
AHL20(2)
----
-->
AtSPL3
--------->
YAB1
<---------
CCA1(2)
<----
---
AtSPL8
<---------
YAB1
------->
TEIL
<-----------
GT1
-----------
---
AtSPL3
------>
ZmHOX2a(1)
<---------
AHL20(2)
-------->
P
--------->
YAB1
--------->
AHL20(2)
aataaaaataatttcctcatcgcatcaaatatttgattataaaattttaaaaatcaacctgtatattaataactggatgattcaaaataaactagaaaat
22140300
<----
<----
------
<-----
------
<-----
<-----
------
------
------
<---------
ANAC58
<---------
ANAC58
--------->
At4g35610
<------
ZmHOX2a(1)
--------->
TOE2(3)
--------->
At4g35610
----
<---------
AHL20(2)
<---------
AHL20(2)
<------
ZmHOX2a(2)
------
------
AHL20(2)
--------->
AHL20(2)
=============
HOX2a_HOX2a
----->
AHL20(2)
---------->
DOF2
--------->
AHL20(2)
<---------
At4g35610
-------
-----
AHL20(2)
----------->
GT1
<---------
AHL20(2)
--------->
At4g35610
<------
>
GT1
<---------
AHL20(2)
----------->
GT1
--------->
AHL20(2)
--------->
ANAC55(2)
<---------
At4g35610
tattttcttaaaaatttatagaatggtaaaaagatggttttaaaactcatttatttaaatactacttacatattcagatcagaggagattgtagcttacg
22140400
<---------
TOE2(2)
-------
HVH21
-------
TGA1
--->
ANAC55(2)
----
TGA2(1)
--->
bZIP60(1)
----
bZIP60(1)
----
ANAC55(2)
-------
--->
ANAC58
-------
--->
TGA2(1)
-------
--->
ANAC46
-------
----->
TGA2(2)
<---------
YAB1
-----------
--->
ANAC58
--------->
DAG2
------->
TEIL
<---------
ZAT18
-->
SPL7
----------->
GT1
---------->
DOF2
<---------
ARR14(2)
--------->
ANAC46
-----
STF1
---------->
DOF2
---------->
DOF2
<-----------
RAV1(2)
<------
ZmHOX2a(1)
tcatatgttatataagtaaaagaaatggtagaaaaagtaagagaaaagaagaccaggggagaagaaccttgtgattgtggaggaagactaggccacacga
22140500
--------------->
AtSPL8
--------->
YAB1
<---------
ARR11(1)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
<---------
CCA1(2)
--------->
AHL20(2)
-->
ANAC58
<----------
DOF2
---------->
ID1
-->
ANAC55(1)
------>
ZmHOX2a(1)
<---------
DAG2
<----------
DOF2
-->
ANAC46
<---------
ANAC58
<---------
At4g35610
<---------
DAG2
-->
ANAC58
<---------
ANAC58
--------->
At4g35610
------>
ZmHOX2a(1)
>
RAV1(1)
<---------
At4g35610
<-----------
HVH21
<-----------
GT1
<----------
DOF2
<--
aattcaaatctttcaaattcagcaacttgcttctcctcacatttgtcagcccctttatataataaacgttcctctttttcgtcttttcaacatatcagaa
22140600
<---------
GLK1(2)
<---------
ARR11(1)
<-----------
ARR10
<---------
--------->
ARR11(3)
<-----------
GT1
--------->
ARR14(2)
<---------
GLK1(2)
<---------
ARR14(2)
<---------
AHL20(1)
<---------
ARR11(3)
<---------
AHL20(2)
------->
TEIL
<---------
CCA1(2)
--------->
YAB1
--------->
ATHB12
--------->
ZAT14
<---------
ALFIN1
<---------
YAB1
<----------
DOF2
--------->
ANAC46
--------->
LBD16
<---------
ALFIN1
--------->
AHL20(2)
<-----------
GT1
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
AHL20(1)
-------
ARR14(2)
<----------
DOF2
<---------
YAB1
<----------
DOF2
------>
ZmHOX2a(1)
aatccctaaattcactgaaccctcttctctctctttctccccccatatcttctgattctcctccaactcctttattaataaattctcctctttcattgct
22140700
------->
GAMYB
--------->
AtMYB61
--------->
MYB46(3)
<---------
ALFIN1
------>
MYB83
--------->
REM1(1)
------>
MYB46(1)
--------->
HSFB2a(2)
------
------>
ZmHOX2a(2)
<---------
GLK1(2)
<-----
<---------
ICU4
<---------
ANAC58
<---------
HSFC1(2)
---------
*
TSS
------>
ZmHOX2a(1)
<---------
ANAC58
--------->
HSFC1(2)
--------->
TOE2(3)
---------->
ID1
<---------
GLK1(2)
---------->
DOF2
<-----------
HVH21
---
CBF
--------->
TOE2(3)
--------->
ANAC46
-------->
P
--------->
ANAC46
------>
ZmHOX2a(1)
ac
ttgtcttcctcatttccctactagtacttgtttcacacagtttcttgatccaaccaaaaccaatacacaaagcttctcaaactccttcacctcaaagc
22140800
----------->
RAV1(2)
<---------
At4g35610
<----------
DOF2
--------->
GLK1(1)
--------->
TOE2(3)
<---------
ARR14(2)
------>
ZmHOX2a(1)
--->
HSFC1(2)
--------->
ARR14(2)
--------->
TOE2(3)
----
HSFC1(2)
<---------
MYB52(1)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
->
DOF2
--------->
At4g35610
<---------
LBD16
------>
ZmHOX2a(1)
<---------
PCF2
--------->
HSFB2a(2)
ttcttcctttacatctgaatcgttgagttaactcggatttgttctgcatcctctgtttctgaatcgtgggccatccttattttgtctcgaattcttcacc
22140900
<----------
DOF2
<------
ZmHOX2a(2)
--------->
ARR11(3)
--------->
AGP1
<---------
ARR11(3)
<-------
TEIL
<---------
AGP1
<---------
At4g35610
--------->
ARR14(2)
--------->
At4g35610
<---------
ARR14(2)
--------->
ZAT2
<---------
CCA1(2)
<---------
ZAT2
<------
ZmHOX2a(2)
---------->
DOF2
--------->
ARR11(3)
<------
ZmHOX2a(2)
---------->
DOF2
------>
ZmHOX2a(2)
<---------
ANAC58
--------->
At4g35610
------>
ZmHOX2a(2)
<---------
ARR11(3)
<---------
ANAC46
--------->
ZAT2
----------->
ARR10
--------->
ARR11(3)
--------->
ANAC46
<---------
ANAC58
<---------
MYB46(3)
<---------
ARR11(3)
<-----------
HVH21
--------->
ANAC46
aattgcttcgatcaagctgcattggttaaccagttgccctaaagatcagatctttgagcaaaattttgtcactgatcttctaaatccaaaccagacacag
22141000
<---------
TGA1a
--------->
TGA1a
==========
==========
==========
--------->
TOE2(3)
--------->
YAB1
<-----------
HVH21
--------->
GLK1(1)
<---------
YAB1
<---------
MYB55(2)
<---------
GLK1(1)
<---------
RVE1(1)
--------->
MYB46(3)
<---------
HSFC1(1)
<---------
CCA1(1)
<---------
MYB52(1)
------->
TEIL
<---------
HSFB2a(2)
--------->
AHL20(1)
===================================
MYC_MYB
--------->
HSFB2a(2)
<---------
ARR11(3)
<-------
GAMYB
------->
GAMYB
---
<---------
At4g35610
--------->
ARR11(3)
----------->
GT1
=====================
MYC_MYB
-------->
P
--------->
ATHB12
---------->
DOF2
--------->
ANAC46
--------->
MYB52(1)
---
caaaacaacctctgtag
atgattcgagaaatctcaaacttacaaaaagatattataaacattcaagacagttattcgaacaaccgagtcatggacgtcgg
22141100
<------
NtERF2
<---------
DEAR3(1)
<---------
LBD16
--------->
HSFC1(2)
----------->
GT1
<---------
HSFC1(2)
<---
--------->
LBD16
--------->
ANAC58
--------->
HSFB2a(1)
-----
------->
GAMYB
--------->
ANAC58
----------->
ARR10
-----
<---------
LBD16
--------->
ANAC46
<------
NtERF2
<-----
-------->
P
--------->
ANAC58
--------->
LBD16
<------
--------->
MYB52(1)
--------->
ANAC58
<---------
DEAR3(1)
------>
ZmHOX2a(2)
--------->
MYB46(3)
--------->
LBD16
<---------
ANAC46
--------->
YAB1
================================
bZIP_DOF
--------->
DAG2
<---------
LBD16
================
HOX2a_HOX2a
==============
MYC_MYB
--------->
DEAR3(1)
<---------
RAP2.6(2)
<------
ZmHOX2a(1)
=============
MYC_MYB
<---------
LBD16
<---------
RAP2.3(2)
---------->
DOF2
------
------>
ANAC58
<----------
DOF2
<------
NtERF2
<---------
At5g28300
<------
NtERF2
--------->
ARR11(3)
------>
ANAC58
--------->
At4g35610
---------->
DOF2
--------->
MYB52(1)
------>
NtERF2
<---------
YAB1
aagaaacaaccggaaaaacatgagctttcgaagttcgccggagaaaagcaagcaagagttacggcggagtttctcggcgcagaaaaggatgatgatcccg
22141200
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AGI:
At3g59900.1
Description:
(ARGOS); unknown protein. similar to ARL (ARGOS-LIKE) [Arabidopsis thaliana] (TAIR:AT2G44080.1)
Range:
from: 22140703
to: 22141441
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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