Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<
-
--------->
ANAC46
-
<---------
ANAC55(2)
<
--------->
ANAC55(2)
-
--------->
ANAC58
-
--------->
ANAC58
<
--------->
At4g35610
--
--------->
TGA2(2)
<-
<-----------
TGA1
--
--------->
At4g35610
<-----------
HVH21
<-
<---------
At4g35610
--------->
TOE2(3)
<----------
<---------
ZAT2
<---------
ANAC55(2)
<-----------
----------->
HVH21
--------->
ANAC46
<---------
AHL20(2)
============
--------->
DAG2
--------->
ANAC55(2)
<-----------
ARR10
<
---------->
DOF2
---------->
DOF2
--------->
bZIP60(1)
<---------
CCA1(2)
--
------
ZmHOX2a(1)
--------->
YAB1
<-----------
GT1
--------->
AHL20(2)
--------->
MYB52(1)
--->
DOF2
--------->
ZAT2
<------
ZmHOX2a(1)
<---------
At4g35610
--------->
LBD16
--
gaggagaaagtgacagctctctgataaaaagagggaatgaaggagaagaatttacgtcagattacgcaattttatgtcttccccaaatctaactgttgtc
22019600
-------
PIF5
------>
MYC2
------>
MYC3
-------
MYC2
------>
PIF5
------>
MYC4
-------
MYC3
------->
TGA1a
--------
O2
------->
O2
--------
TGA1a
-
RAV1(1)
--------->
ZAT14
-
AtMYB77
<-----------
GT1
<-----------
GT1
<---------
YAB1
<-
========
MYC_MYB
<---------
ZAT14
<----------
DOF2
<--
-------
MYC4
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<----------
DOF2
<-----
------->
ANAC46
<---------
ZAT14
<----------
DOF2
<----------
DOF2
<--------
------->
ANAC55(2)
--------->
ZAT14
------>
ZmHOX2a(1)
--------->
YAB1
---------->
ID1
<--------
cacgtgtcattttcctcttcactgtagatttaacttatcctcctttgtcatccttttcattatctgtattttttgttctttctttttctgttttgcttaa
22019700
--------->
ARR11(3)
--------->
YAB1
<---------
YAB1
--------->
YAB1
<---------
ARR11(3)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
CCA1(2)
--------->
ICU4
----------->
GT1
---------
DOF2
--------->
AHL20(2)
<---------
ARR11(3)
<---------
AHL20(2)
-------
DAG2
--------->
YAB1
--------->
AHL20(1)
<---------
YAB1
<
------
GT1
--------->
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
-----
-
ANAC58
------>
ZmHOX2a(1)
<---------
ARR11(3)
<---------
AHL20(2)
---------->
DOF2
-
ANAC58
<----------
DOF2
<---------
AHL20(2)
<---------
AHL20(1)
<---------
AHL20(1)
<----------
DOF2
-
ccttttctatatcctttttaaaataataataaaatctctatcaattcaatatttttttttgcagtaatattatttactgagagtcacctttaaagaataa
22019800
--------->
TGA2(2)
<-----------
TGA1
--------------->
AtSPL8
<---------
ANAC55(2)
<---------------
AtSPL3
--------->
bZIP60(1)
<---------------
AtSPL8
<---------
bZIP60(1)
--------->
DAG2
<---------
TGA2(1)
---------->
DOF2
--------->
TGA2(1)
<---------
ANAC46
--------->
YAB1
<-----------
GT1
--------->
LBD16
<---------
ATHB51
<---------
DAG2
--------->
ANAC55(2)
--------->
ANAC58
--------->
AHL20(2)
----------->
GT1
<---------
DAG2
<---------
ANAC58
--------->
ANAC58
--------->
CCA1(2)
<---------
AHL20(2)
<----------
DOF2
<---------
ANAC58
<------
ZmHOX2a(1)
<
---------
ARR11(3)
--------->
AHL20(2)
<-----------
GT1
<-----------
HVH21
<---------
PCF2
<
----->
DOF2
<---------
ATHB12
<----------
DOF2
--------->
ANAC46
<---------
ZAT18
<-
-------->
ARR11(3)
--------->
YAB1
<-----------
GT1
<-----------
STF1
--------->
ALFIN1
<--------
aagatataaaaaaaatccaataataaaaaggtaattgtactttacttttcacattacgtcatccgtggtagtggggtcgattaggacgcatcattttttt
22019900
---------->
DOF2
<---------
RAP2.3(2)
---------->
DOF2
---------->
DOF2
<---------
RAP2.6(2)
--------->
ANAC55(1)
<---------
ATHB12
--------->
ANAC46
--------->
ANAC58
--------->
ARR14(2)
----------->
GT1
---------
LBD16
--------->
ANAC58
----------->
ARR10
--------->
YAB1
---------
At5g28300
--------->
ANAC46
----------->
GT1
--------->
WOX13(1)
----------
GT1
<---------
ALFIN1
--------->
AHL20(2)
------------>
CBF
-
AHL20(2)
<---------
ALFIN1
<---------
YAB1
<---------
ARR14(2)
--------->
DAG2
<
tttacggctcagtgactcacacacacacgccaaaagcagagtttattaaaaacagagtaaattcgctattccaatcaaaaggtgaaagaaaaaaaaactc
22020000
--------->
PCF2
<---------
MYB52(1)
------->
TEIL
--------->
ARR14(2)
<---------
REM1(1)
--------------->
AGL15
<---------
WOX13(1)
<---------------
AGL15
--------->
ATHB12
----------------->
AGL2
--------->
ICU4
--------->
At4g35610
<-----------------
AGL3
<---------
YAB1
<---------
At4g35610
--------->
HSFC1(2)
----------------->
AGL3
--------->
At4g35610
<-------
PIF5
<---------
At4g35610
------>
ZmHOX2a(1)
*
TSS
<----------
DOF2
<---------
At4g35610
--------->
At4g35610
--------->
LBD16
---------
GLK1(2)
<---------
ARR14(2)
<---------
At4g35610
------->
PIF5
<---------
HSFC1(2)
-
aagagtctctcctccattaatggaagg
aaccgtttctctttctatgtgctgattgctgatgtagctcccacgagctcaaga
gtaagcttctaccgcaatt
22020100
------>
ZmHOX2a(1)
--------->
RAP2.6(3)
--------->
TOE2(3)
--------->
ARR14(2)
<---------
CCA1(2)
<-----------
GT1
<---------
ARR14(2)
<----------
DOF2
<-----------
GT1
------>
MYB83
<-----------
GT1
------>
ZmHOX2a(1)
<----------
DOF2
------>
MYB46(1)
<-----------
GT1
------>
ZmHOX2a(1)
<---------
AHL20(2)
----->
ZmHOX2a(1)
<----------
DOF2
---------->
DOF2
<-----------
GT1
--------->
AHL20(2)
-----
tcctctaactgaaaccaaatcggctctttactaattttacaataaagtttcctcttttatctttcctctctggctaattaaactttctcttcctcaatac
22020200
<-------
<---------
ZAT14
--------->
LBD16
<-------
<---------
REM1(2)
<-----------
RAV1(2)
<-------
<-----------
GT1
<-------
TEIL
--------->
MYB59
<------
NtERF2
<XXXXXXXXXXXXXXXXXXXXXXX
MIR163
--------->
At4g35610
--------->
GLK1(2)
--------->
ALFIN1
---->
ANAC46
--------->
ZAT14
<---------
At4g35610
--------->
YAB1
<----------
DOF2
cccattcaagtttcaactcttctacactgtgtcttacagcttcatgctccaggtttaggtctaaaactcataatctggttctctttttttcggtggggtt
22020300
<---------
ATHB12
<---------
YAB1
------>
MYB83
<----------
DOF2
<---------
ANAC58
------>
MYB46(1)
----
<---------
DAG2
<---------
ANAC58
<-----------
GT1
<---
--
ANAC46
<---------
GLK1(2)
----------------------->
TaNAC69(2)
<---
--
ANAC58
<----------
DOF2
<---------
ANAC46
--------->
ANAC55(2)
<-----
--
ANAC58
<---------
ICU4
------->
TEIL
<-----------
GT1
<---------
MYB59
---------
tgtttacttttgctactagataatgacttttagattccttctgtatgtcttgttattgttttcacgttttttttttaaccaaacaatagcaaaattgtta
22020400
<---------
ANAC58
<---------
ANAC46
--------->
LBD16
<---------
ANAC55(2)
<---------
ANAC58
----------->
GT1
----->
ANAC55(2)
<---------
ANAC58
--------->
ANAC55(2)
------
ANAC55(2)
<----------
DOF2
------>
ZmHOX2a(1)
<-
------
ANAC55(1)
<---------
DAG2
---------->
ID1
---------
------
GT1
<-----------
GT1
--------->
At5g28300
--------->
TOE1(2)
-->
GT1
<-------
TEIL
<---------
YAB1
<---------
ANAC46
<---------
ANAC58
---------
catgttttggatgttcatttctgtgatttgggattatttttaccttttccttgcggtgaagtttgtcctgtttcgtaatttgtgaacatatgaataattt
22020500
Previous
Next
AGI:
At3g59580.1
Description:
RWP-RK domain-containing protein. similar to RWP-RK domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G43500.1); similar to NIN-like protein 2 [Lotus japonicus] (GB:CAE30325.1); contains InterPro domain Plant regulator RWP-RK (InterPro:IPR003035); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270)
Range:
from: 22020028
to: 22023743
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version