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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                               ------>ZmHOX2a(2)
                                                                              --------->HSFB2a(1)
                                                                              <---------HSFB2a(1)
                                                                              <---------GLK1(1)
                                                                              <------ZmHOX2a(2)
                                                                             <---------ARR11(3)
                                                                             --------->ARR11(3)
                                                                             --------->ARR14(2)
                                                                             <---------ARR14(2)
                                                                             <-----------ARR10
                                                                             <---------ARR11(1)
                                                                            <---------CCA1(2)
                                   --------->MYB52(1)                       <---------ARR14(1)
 --------------->AGL15            ----------->HVH21                     <-----------HVH21
----------------->AGL3          ----------->GT1                        <-----------RAV1(1)
--------DOF2               ----------->HVH21                      --------->TOE2(3)
>ZAT6                     <-----------HVH21                       --------->TOE1(3)
------------WRI1         ------>ZmHOX2a(1)     ----------->GT1 <-----------GT1--------->GLK1(1)
-GT1  ---------->DOF2  ----------->RAV1(2)   <---------ZAT14--------->YAB1--------->ETT(1)  <-------
 
ctttctatgtaaagatagatagacactcctgtgagaggtaacagagagtgaagaaaaaatcaatagtaaccttaatgtcggatcttcgatacagcatgat  21935000
                                                                   --------->DAG2
                                                                  ---------->DOF2
                                                              ------>ZmHOX2a(1)
                      <---------ANAC55(2)                    --------->TOE2(3)
                      --------->ANAC46                       --------------->AGL15              ----
                      --------->ANAC55(2)              --------->AHL20(2)                     ------
                      --------->ANAC55(1)   <---------REM1(1)<---------------AGL15       <---------AHL20(2)
--YAB1  --------->ATHB12        ---------->DOF2      --------->TOE2(3)          <-----------GT1-----
 
acttccatagacgattgccagtaacacataattcagaaagcattgtgatgttggaacattaattcctaaaaaagttttaaaatttacaagaatttatcaa  21935100
                       <----------CDC5                                       <---------At4g35610
                      --------->At4g35610                                    --------->ZAT2    <----
                      <---------At4g35610                                    --------->At4g35610
           --------->ARR11(3)                                             <---------ANAC58  --------
           <---------ARR11(3)                                             <---------ANAC58----------
----->MYB46(3)  ---------->DOF2  --------->YAB1                   <----------DOF2 <---------At4g35610
--->WOX13(1)<------ZmHOX2a(2)    ----------->GT1                 <---------DAG2 <-----------RAV1(2)
--->P---------->DOF2  ----------->RAV1(2)      ---------->DOF2<-----------GT1<---------ZAT2 --------
 
ccaattgataaagagatcatgaagccgctggggtaatggtaataaaccagaaaagaagaaacttgaaaccttttctggcgagctcagaagatgtaaagcc  21935200
                                                                                                 <--
-----------AGL15      <---------At4g35610  <---------ATHB12            --------->AHL20(2)       <---
->ANAC58              --------->At4g35610 ------>MYB83               <----------DOF2 <---------ATHB12
>DOF2                 --------->ZAT2      ------>MYB46(1) ---------->ID1            <-----------HVH21
->ANAC58            <------ZmHOX2a(1)    --------->WOX13(1)  ------>ZmHOX2a(1)     --------->ANAC46
 
attagaagtagcaagaagtgagaggagctgtcccaaaccaagaccaatcagtgtcttcttcgtcctaatctcctttaaatcgaaacccatcactgagtca  21935300
                                                <---------ZAT14                            *TSS
                                                <---------REM1(2)                          <--------
                                           --------->ZAT2                                  ---------
                                           --------->At4g35610                          --------->HSFB2a(2)
                      --------->At4g35610  <---------ZAT2                            <----------DOF2
                      <---------At4g35610  <---------At4g35610                    ------>NtERF2
        ---------->DOF2                  <-----------RAV1(2)                     --------->ANAC58
       <------ZmHOX2a(1)                ------>ZmHOX2a(1)                        --------->ANAC58
 <---------ZAT6    <------ZmHOX2a(1)   --------->TOE2(3)                      ----------->HVH21
-------MYB52(1)<---------ZAT14   --------->AHL20(2)                          <-----------HVH21     <
----GAMYB     --------->ALFIN1 <----------DOF2  --------->ZAT14             --------->ALFIN1    <---
 
gttagtgagaggaaagagtgtaggaagctgtagtctttaaatcctcagctgtacacagagagagagaagagagaagagagtgtgacgcctttgggaaccg  21935400
                                                                     ----------->GT1
                                                               <---------------AtSPL8
                                                         --------->AHL20(1)
                                                         <---------AHL20(1)
                                                    --------->AHL20(1)
                                                    <---------AHL20(1)
                                                    <---------AHL20(2) <---------MYB52(1)
                                                  <---------YAB1     <---------ZAT6
                                                <---------ZAT6 <---------------AtSPL3
                                             --------->YAB1<------------CBF
  <----------DOF2                         --------->WOX13(1)   --------------->AtSPL3  --------->ZAT6
-ARR14(2)                             ----------->GT1    <---------AHL20(2) <-----------GT1
>ARR14(2)                         <---------TOE2(3)--------->YAB1  <-------TEIL <---------ZAT14
-----------GT1                <------------CBF <---------YAB1  <---------TOE2(3)--------->ZAT14
------MYB52(1)        --------->ARR11(3)------------>CBF --------->AHL20(2) <---------AHL20(2)
 
tttgacttttcaactctgagttttagttcttgggattgagatagtcaattagtattatattttattgaggtacagttatttacttcactaacaccatttg  21935500
                                                                                     ------->GAMYB
                                                                                   -------->P
                                                                                   ------>MYB46(1)
                                                                                   ------>MYB83
                                                                                 <---------MYB111(2)
                                                                        --------->ZAT14     --------
                                                                        <---------ZAT18  --------->DAG2
                                                                        --------->ZAT18 ---------->DOF2
                        ---------->ID1                     ----------->GT1     ------>ZmHOX2a(1)
                 <-------TEIL <----------DOF2             <---------------AtSPL8 <---------ALFIN1
    <---------ICU4     <-----------GT1                    --------------->AtSPL8 --------->AtMYB61 -
 
aaactaatctttgtatcaaatacatttttccttctttacagttaccaaagtttgggagagaaatgtacaaacttgtggactcctccaacccaaaagtgtg  21935600
                                                                                       <---------HSFC1(2)
                                                                                       --------->HSFC1(2)
            <---------CCA1(2)                                                          --------->HSFB2a(1)
     --------->YAB1                                                           <-----------RAV1(2)
     <---------ICU4                                                      <------MYB46(1)        <---
    --------->ICU4                                                       <------MYB83 --------->ANAC58
  --------->YAB1              <---------WRKY38(1)                       --------->MYB59<---------HSFB2a(1)
--------->AHL20(2)   --------->ANAC58       ----------->GT1             <---------TOE2(3)       ----
--------->AHL20(1)   --------->ANAC46       --------->ANAC58        --------->ATHB12  --------->ANAC58
--->GT1 --------->YAB1       --------->WRKY18(1)               --------->ATHB12   --------->ALFIN1 <
-------->YAB1        --------->ANAC58       --------->ANAC58<----------DOF2 <-----------HVH21   <---
 
aaaaataataatcatatatcccacaagtcacagtcaatgttatagacaagtaaaaaccagaggctttgatttgattaggtttcaggtggaagcatctata  21935700
     --------->ALFIN1
   <---------ANAC46       ------>ZmHOX2a(1)  ------>ZmHOX2a(1)                                  ----
------TOE2(3)          ------>ZmHOX2a(1)  ------>ZmHOX2a(1)                                 ------>ZmHOX2a(1)
----->DAG2          ------>MYB46(1) --------->At4g35610              <----------DOF2 <----------DOF2
--------P           ------>MYB83    <---------At4g35610<---------ALFIN1      ------>ZmHOX2a(1)  ----
------TOE1(3)  <-----------GT1      --------->ZAT2   -------->P<---------ALFIN1 ------>ZmHOX2a(1)
 
aggttgctgtggagcgagtcaccatcctcctcatcgaacagcttcctcctctcacttaccacttctccacttctttgttcctcctcatctttctccttcc  21935800
                                                  <---------GLK1(2)
                                         <---------ZAT14
                             ------>ZmHOX2a(2)    --------->ARR14(2)
                           <---------ARR11(3)     <---------ARR14(2)
                     <---------ZAT14     --------->ZAT18                                     -------
      <<<<<<<<<<<<<<<<<LFY --------->ARR11(3)   ----------->ARR10                            <------
----->LBD16          --------->ZAT14     --------->ZAT14                          <---------ZAT14
-->ZmHOX2a(1)  --------->WRKY18(1)       <---------ZAT18                   ---------->DOF2<---------ANAC46
 
tgaaaatatcaacaatgggtcaagaacactgatcttcatgtgagtgcagaacagatactctacttgaagaaagattagaaaagactgtacattgagtata  21935900
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AGI:  At3g59310.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G59340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67774.1); contains InterPro domain Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262)
Range:  from: 21932723    to: 21935392    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g59320.1   
Description:  integral membrane protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G59340.1); similar to Os05g0299500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001055130.1); similar to hypothetical protein OsI_018658 [Oryza sativa (indica cultivar-group)] (GB:EAY97425.1); contains InterPro domain Protein of unknown function DUF914, eukaryotic (InterPro:IPR009262)
Range:  from: 21935500    to: 21937817    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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