Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                           <---------                                                                                           <---------HSFB2a(1)                                                                                      <---------At4g35610                                                                                      --------->At4g35610                                                                                      <------NtERF2                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                 --------->DAG2                                                                                --------->SPL7                                                                                ---------->DOF2                                   <---------ARR14(2)                        <---------ANAC55(2) <<<<                         <------ZmHOX2a(2)                               <---------ARR11(3)<---------KAN4(1)                        --------->ARR11(3)     <---------At4g35610       --------->ARR11(3)--------->HSFB2a(1)                        <---------ARR11(3)     --------->At4g35610      <---------RVE1(1)  --------->KAN4(1)                   --------->AHL20(2)  ------>ZmHOX2a(1)                <---------GLK1(1) <---------ARR14(2)             ----------->RAV1(1)  <---------CCA1(2)                     --------->GLK1(1) ---------->TaMYB80           --------->SPL7=====================HOX2a_HOX2a              <---------ARR11(3) --------->ARR14(2)   <-----------HVH21---------->DOF2--------->ARR14(2)<---------MYB52(2)--------->ARR11(3) <---------KAN4(2)   gaacatgtcatcgtcccacaaataaagatcaactccatatcctgtttttagctcaactaatgtcttactcacagatatctcgtaaggcagcgaatattct  21775900                                                                   <---------ALFIN1                                                                  <---------REM1(2)                                                                 <---------ALFIN1                                                               <------ZmHOX2a(2)                                                               ====================HOX2a_HOX2a                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                            <---------ATHB12                                                         --------->TOE1(2)                    <------                                                      --------->ARR14(2)                    <--------    <---------GLK1(1)                              --------->ANAC55(2)            --------->ANAC46    --------->GLK1(1)                       <---------ALFIN1--------->MYB46(3)<------ZmHOX2a(2) >KAN4(2)                                 ----------->RAV1(1)------->GAMYB   <---------ARR11(3) -TaMYB80                         --------->DEAR3(1)  <---------ARR14(2)    <------ZmHOX2a(1)<------- <<<<<TBF1                     <---------ALFIN1    <---------ANAC55(2) <-----------HVH21   <---------   tcttcgaaatccatgaatagagcaaggtgagaaacaccgcgttgcaacacattacatatccaacgatccacacggtcaggatcaacaccagttttaacat  21776000                                                               ------->TEIL                                                            --------->ANAC46                                                            --------->AtLEC2                                                      --------->GLK1(1)            ------>ZmHOX2a(1)                                                   --------->ANAC58                <----------DOF2                              --------->ZAT14      --------->ANAC46           <---------ANAC58 <----- ---------AGL15               <---------ZAT14      --------->ANAC58           <---------ANAC58 ------ ---GT1                  --------->ZAT18          --------->LBD16         <---------GLK1(1) --------- --TOE2(3)              --------->DEAR3(1)    <---------ARR14(2)          --------->GLK1(1) --------- --GT1    --------->TOE2(3)  --------->AtLEC2 --------->ARR14(2)     --------->LBD16       <---------MYB52(1)   ttagggagaatttcttaatgggagaagcgccctgcaatgccaaaaccctatccacgaaatccatgaaactccgaagaattccgtccttttcccgtttacc  21776100                                                                           --------->HSFB2a(2)                                                                          <---------ANAC58                                                                          <---------ANAC58                                                             --------->ANAC58                                                             --------->ANAC46                                                             --------->ANAC58                                                           --------->MYB52(1)                                                --------->ANAC46          <---------ANAC46 ------------AGL1                               --------->ANAC58      <----------DOF2      --------->At4g35610 ----------->AGL1             <<<<<<<<<<GATA-1  --------->ANAC58      --------------------->WRI1   <- >WRKY12               --------->ATHB12       --------->MYB52(1)<---------ALFIN1           <---------At4g35610 >WRKY38(1)      --------->YAB1      <---------O2          <---------DOF5.7(2)         <---------REM1(1)   ctcttggggatgaagaaaatcagagtcattgaaatcgagacttgggacaaacgcaaacagataacgccacttctttgcgagaaccgatgttgaagcagcc  21776200                                               <---------ANAC58                      --------->CCA1(2)    <---------MYB52(1)                     --------->ARR11(3)    --------->At5g28300                     --------->ARR11(1)   --------->LBD16                                           -            >>>>>>>>>NAM              <---------SPL7         <-------TEIL                          --      <------MYB46(1)<---------ARR11(3)   ----------->GT1   <------ZmHOX2a(2)                      --      <------MYB83 --------->ANAC58   <-----------HVH21    --------->ARR11(3)                    ----    <--------P     --------->ANAC58  --------->TOE1(1)     --------->AGP1                  --------->ARR14(2)   <-------GAMYB   ----------->ARR10 --------->TOE2(1)     <---------ARR11(3)              <---------ARR14(2)  <---------MYB46(3) <---------ARR14(2) <---------LBD16   --------->GLK1(1)           --------->ANAC46  --------->MYB55(2) --------->ARR14(2) --------->SPL7    <---------GLK1(1)          <---------REM1(2) ---------DOF2----------->HVH21 <-----------GT1<---------ANAC58                    --------->ETT(2)--   tctttggttggaagggatgacaagatatgagaaataacctcgtccggtaacttgctgaagagatccatcttctccgagtccattgtctacacaaatctcc  21776300                                                 <---------ARR14(2)                              <---------MYB111(1)<---------ARR11(3)                              --------->MYB46(3) --------->ARR11(3)                              <---------MYB46(2) --------->ARR14(2)     ----------->GT1          <---------MYB59--------->HSFB2a(2) ----------->CBF        <---------ICU4--------->YAB1           ---------->DOF2                ------- ------->ANAC46     <-------TEIL   ----------->GT1 ------>ZmHOX2a(2)            --------->AHL20(2) ------->ANAC58  --------->YAB1 ------>MYB83 <---------HSFB2a(2)                <---------AHL20(2) -->ZmHOX2a(1) --------->ANAC58 ------>MYB46(1) <------ZmHOX2a(1)              --------->AHL20(2) ------->ANAC58--------->ANAC58 --------->MYB52(1)<------ZmHOX2a(2)           <----------DOF2 -------   taagcaatagaaaaatcaagcatacatcagtaccaaacagtaatattctaggatctaaaaactgagaaaggaacagagcgatttaattcaaacaagaagc  21776400                                                  ------------>CBF                                                  <---------ATHB12                                         <------------CBF                                      ------------>CBF        --------->ATHB12                                     --------->ANAC55(1)    <---------WOX13(1)                                     --------->ANAC55(2)   <------------CBF  --------->AHL20(2)                 --------->ANAC46     --------->ATHB12  <---------AHL20(2)                 --------->ANAC58    <---------YAB1 --------->AHL20(2)                  --------->ANAC58  --------->YAB1          --------->TOE2(3) -->ANAC58      ---------->DOF2   --------->ARR14(2)  ----------->TGA1         --------->TOE1(3) -->ANAC58     --------->YAB1     <---------ARR14(2)  <---------ATHB12  <---------LBD16   aaattaaaatccctaaattatagcagaaaaatcacatatacgcaattgctaaatcaatgacgattgatttgatttggggaaccctaaattaggggggatt  21776500                                                        --------->ANAC58                                                        --------->bZIP60(2)                                                        --------->ANAC46                                                        --------->ANAC58                                                    ------>MYB46(1)                                                    -------->P                                                    ------>MYB83                                                   --------->MYB55(1)                                             <---------ANAC58                                             <---------ANAC58<---------YAB1            <---------AHL20(2)     <---------At4g35610<---------ALFIN1           <---------ATHB12   --------->CCA1(2)   <---------MYB46(2)           ----------->TBP   <---------ARR14(2)   --------->MYB46(3)           --------->AHL20(2)--------->ARR14(2)   <---------MYB111(1)                             ---       ------------>CBF      <---------ARR11(3)   <---------MYB59                       --------->CCA1(2)  --------->ARR14(2)         --------->ARR11(3)   <---------MYB111(2)                  --------->ARR14(2)  ------->TEIL             ----------->ARR10<---------------AtSPL8               <----------DOF2 ---- <---------GLK1(2)    ---------->DOF2       --------------->AtSPL8   ---------->DOF2   <---------ARR14(2)   actgaatctcccaataaatggccataaagaagatttgagttgatatggagtacctaccacgttatgaagaacaaagttcaaaactttcagatttgaggga  21776600                                         <---------AHL20(2)                                         --------->AHL20(2)                                         <---------AHL20(1)                                        --------->AHL20(2)                                    <---------AHL20(2)                                    --------->AHL20(2)                             <---------ANAC58                             <---------ANAC46                    --------->MYB46(3)  <---------AHL20(2)                   --------->ANAC58 --------->AHL20(1)         <---------CCA1(2)   <---------ANAC55(2)     --------->ANAC58        <---------ANAC58                                            --------->AHL20(2)     --------->ANAC46        --------->ANAC55(2)                                 --------->DAG2     --------->ANAC58        ----------->GT1   <---------LBD16  <-----------GT1 ---------->DOF2 ------>DAG2       --------->ANAC58<---------AHL20(2)   ----------->GT1      --------->YAB1 ------>DOF2       --------->ANAC46--------->AHL20(2)--------->MYB52(1)     <---------YAB1   aaagcatacgcatatttttgcacccaatatttcgtaattttattaaattttcggaaaacggataatatacaattcagtatgataaagctcataaatttta  21776700                                                                                        <---------YAB1                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)                                                                                      --------->YAB1                                                                                     <---------YAB1                                                                                     --------->ICU4                                                                                   --------->YAB1                                                                                   <---------ICU4                                                                         ------>ZmHOX2a(2)                          <---------ANAC58                             --------->ARR11(3)                          <---------ANAC58                   --------->YAB1       <---------YAB1                          <---------ANAC46                 <---------ARR11(3)   --------->YAB1                         <-------TEIL                     --------->RVE1(1)    <-------TEIL                      --------->CCA1(2)             --------->YAB1     <---------ARR11(3)--------->YAB1         --------------->AtSPL8                     ----------->GT1--------->YAB1 --------->ICU4<----   gaaatgttttctttgtaccattagagatgcgttgaattcagaagggtttagcattcgtaaatatcgtaaccatgatctatattcatgatgatcatatgat  21776800  Previous    Next  AGI:  At3g58860.1    Description:  F-box family protein. Identical to Putative F-box protein At3g58860 [Arabidopsis Thaliana] (GB:Q9LXR6); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G59000.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 21774719    to: 21776283    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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