Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <<<<<<<<<<<<<<<<<LFY                      <---------ZAT18                                     <----------DOF2       <------ZmHOX2a(1)     --------->YAB1                              <---------ANAC58  <---------SPL7      ----------------->AGL1                             <---------ANAC58 --------->ANAC58  --------->DEAR3(1)                        --------->ANAC58                 <------ <---------ANAC55(2)--------->ANAC46             <-------TEIL--------->ANAC58               <-------- --------->ANAC58<---------At5g28300          --------->At4g35610   <---------ICU4         <---------YAB1 -----ZmHOX2a(1)<-----------GT1      <---------HSFB2a(2)  <------ZmHOX2a(2)           ----------->RAV1(2)   aggacgtaaggagtcaattcacagcccacaatgggaatttcagaaggaagatgcactcggatcacgctcagcattgcttttcaataacacctggtgattg  21674700                                 --------->YAB1                               --------->GLK1(2)                        <---------At4g35610                   <---------ICU4                        --------->ZAT2                        --------->ATHB12                        --------->At4g35610                  --------->ICU4                        <---------ZAT2                       <---------YAB1                       ----------->RAV1(1)                 <---------ICU4                     --------->At4g35610                --------->YAB1                     --------->ZAT2             --------->ARR14(3)                                 <-                  --------->ZAT2<-------TEIL    <---------ARR11(3)                            ------>MYB83                  --------->At4g35610           <---------ARR14(3)                 <-------GAMYB<----                  <---------At4g35610           --------->ARR11(3)                <---------ANAC46 <-     --------->ZAT6  <---------At4g35610  --------->ANAC58--------->ICU4          <---------MYB46(3)    --------->ZAT18 ----------->RAV1(1)   --------->ANAC58<---------YAB1   <---------YAB1     ------>MYB46(1) ---WOX13(1)     ----------->RAV1(1) --------->GLK1(2) <---------YAB1      ------->TEIL     <-------- -MYB46(3)     --------->At4g35610  <---------GLK1(2)  --------->ICU4   <---------YAB1--------->YAB1   tcgaagaacactatcgaagcagcagcagcagagattcagaatcgaagcaagaccttgatgatgattattagatgatgaatattgtcgttgataacctaat  21674800          --------->ANAC58                                                                          <          --------->ANAC58                                                                          -         --------->SPL7                                                                            --       <---------SPL7                                                                              <-       --------->TOE1(2)                                                                           --      <---------ANAC58                                                                            ---      <---------ANAC58                                    --------->HSFC1(1)                      <--     <---------------AtSPL3     <---------ANAC58          <---------HSFC1(1)                      <--    <---------ANAC46            <---------ANAC58          --------->HSFB2a(2)                     --- --------->ALFIN1             <---------AHL20(2)     ------>MYB46(1)                              --- --------bZIP60(2)    --------->MYB46(3)             ------>MYB83                                 <-- -----ATHB12        <---------ARR14(2)             --------->AtMYB61       <---------ARR11(3)     --- --------ANAC46     --------->ARR14(2)         <---------ETT(1)            --------->ARR11(3)    <--- -MYB59--------->ZAT18------>ZmHOX2a(2)   ---------->DOF2 <---------HSFB2a(2)                   -----   gaagtggagcgtacgataggctgatccaccatttacttgaaccgaaaacccgaccaatctctagaaaccctagaaaatgtcttcttcagacaaggttgaa  21674900            ------>MYB46(1)            ------>MYB83          <---------MYB59       --------->ARR14(2)       <---------ARR14(2)  --------->LBD16 ---------LBD16 ----->ZmHOX2a(2) ------->ARR14(1) -----ZmHOX2a(2)                                                                    ------>ZmHOX2a(2) ------->CCA1(2)                                                                    ================= ------>ARR14(2)                                                                   ================== -------ARR14(2)                                 --------->YAB1                   <---------ARR11(3) -------ARR14(3)                         ----------->GT1                          --------->ARR14(2) ------>ARR11(3)                       ---------->DOF2                            --------->AGP1 ------>ARR14(3)                   ---------->DOF2        <---------HSFB2a(2)     <---------ARR14(2) -------ARR11(3)            ------------------------>ANAC81  ---------->DOF2      <---------ARR14(3) ------>ARR11(1)           ---------->DOF2       -------->HAHB4                   --------->ARR11(3) ------GLK1(1)      ------------------------>ANAC81       --------->HSFB2a(2)     --------->ARR14(3) ------>ARR10  --------->YAB1----------->GT1    --------->ICU4       <---------YAB1<------ZmHOX2a(2)   gatccggcagaaccaaattagaatcgaagaaaagaaaaaaagaaaggaaaatgatggtatcgagaaagcttataagagatgtgagatcttgaaggaattt  21675000               <----------DOF2           <---------GLK1(2)                                                          ----------->GT1         ------>ZmHOX2a(2)                                                            <------MYB83      <------ZmHOX2a(1)                 --------->WOX13(1)                            <------MYB46(1)    <---------TOE1(3)         ----------->GT1                                       --------->ALFIN1    <---------TOE2(3) --------->At5g28300 <---------ATHB12                      --------->LBD16 ============HOX2a_HOX2a  <---------ARR14(2)                                   --------->LBD16 ============HOX2a_HOX2a  --------->ARR14(2)                            *TSS  <---------LBD16--------   tgtattaaggatcgattctttcgctgtgaatatggaaaaaatcaatgaaatcgattttggtttttttatgtgttttttttccccgagtgggtttaatact  21675100                                                    <---------WOX13(1)                                                   <------------CBF                                                 <---------AHL20(2)                                                 <---------YAB1                                                --------->AHL20(2)                                                <---------AHL20(2)                                             --------->AHL20(2)                                      <---------AHL20(2)                                     --------->AHL20(2)<---------ARR11(3)                             --------->YAB1  <---------AHL20(2)                            <---------YAB1   <---------AHL20(1)                          <---------ICU4   <---------AHL20(2) <---------DAG2                         <---------YAB1    <---------AHL20(1) <----------DOF2      <---------AHL20(2) --------->ICU4   --------->YAB1 ------>ZmHOX2a(2)    <---------YAB1    <---------ARR11(3) <---------YAB1--------->ARR11(3)                      ------ ->ZAT6        <----------DOF2 <---------YAB1--------->AHL20(1)       --------->YAB1  ---------->ID1   aaaactattattttgtgctttgaagacattattatgaaattttataatattttaattgatcttccttttcgatgaaaattttggttttggcgctcaaaga  21675200                                                          ----------->GT1                                                          <---------ANAC55(2)                   -----                                                          <---------ANAC46                <---------ANAC58                                    <---------AHL20(2)    <---------ANAC58                <---------ANAC58                                   --------->AHL20(2)     <---------ANAC58           <---------ICU4                             ---------->DOF2     --------->HSFB2a(2)                 --------->YAB1        ---------->ID1      <---------AHL20(2)   <---------HSFB2a(2)             XXXXXXXXXXXXXXXXXXXX       <-----------GT1  --------->AHL20(2)    --------->GLK1(2)                  XXXXXXXXXXXXXXXXXXXX --->ATHB12     <---------YAB1 ----------->GT1--------->ARR11(3)           --------->ANAC46  --------   ttgaaagtttttcgttttatttttgtttatataaagataaaattttaaaatctagaaaatgcgtaaaaacaaataatccacaactaaacatgacttacca  21675300                                                                            <---------WOX13(1)                   --------------->AtSPL3  ----------->GT1                --------->YAB1          <---------ARR11(3)               <------MYB83                  <---------YAB1 ----->DOF2        --------------->AtSPL8  <------MYB46(1)          --------->ARR11(3) >MIR169A --------->ARR11(3)           --------->ATHB12          <---------AHL20(2) >MIR169B/C    <---------YAB1 <---------YAB1    <---------ANAC46 --------->AHL20(2)              ---- >P  <---------ATHB12         <---------ANAC55(2)   ---------->DOF2<---------CCA1(2)  ---------->DOF2   aagacaaatcaagatttatgactcgtaccattacgaaaacaagattggtgacttaaaagaagtgtatttatatctatgatagattgaagaaagaaggaat  21675400                               ------->TEIL                             ------->GAMYB                                        --------->ANAC58                            --------->ANAC58                                      --------->ANAC58                            --------->ANAC58                                  --------->CCA1(2)                         <---------WRKY12            <---------REM1(1)       <----------ID1                         <---------WRKY38(1)         --------->ALFIN1<---------TOE2(3)                     <---------ZAT6              <------ZmHOX2a(1)   <---------YAB1  --------->ICU4   <---------ANAC58           <-----------RAV1(2)    <---------TOE1(3)         <----- ------->GT1       <---------ANAC58       <------ZmHOX2a(1)       <---------MYB52(1)           <-----   ggtgaagatgagtcaataggtgagtgttcaacgcacattcagtaggagccaggaggtgtagtttcttcgttaagattaagagacaagaaatatcaattcg  21675500       --------->ARR11(3)       <---------ARR11(3)      --------->YAB1   --------->YAB1  <---------YAB1  <---------AHL20(2)              <---------TOE2(3)  --------->AHL20(2)              <---------TOE1(3)     <----------DOF2 ----ANAC58           <-----------RAV1(1)          <<<<<<<<<TBF1         <---------AHL20(2)         - ----ANAC58           <---------MYB46(3)    <-----------GT1    ---------->ID1      <---------ICU4 ---   tgatataattatcttgaagacgatttgttgcagattaaggtagaattaacttcttcttcttttttgttttttttttaaaatgtgagaattacccaagaag  21675600  Previous    Next  AGI:  At3g58580.1    Description:  hydrolase. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT3G58560.1); similar to hypothetical protein OsI_009920 [Oryza sativa (indica cultivar-group)] (GB:EAY88687.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73496.1); similar to unknown [Populus trichocarpa] (GB:ABK95050.1); contains InterPro domain Endonuclease/exonuclease/phosphatase (InterPro:IPR005135) Range:  from: 21671575    to: 21675072    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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