Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ANAC46                                                               <----------DOF2                                                              <---------ANAC58                                                              <---------ANAC58                                                          <---------ANAC58                                                    ------>ZmHOX2a(2)                                                   --------->CCA1(2)                                                   <------ZmHOX2a(2)                                                  <-----------ARR10                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                                  --------->ARR14(2)        ------>ZmHOX2a(1)                         --------->AGP1  <---------ANAC58 --->CCA1(2)                                      <---------AGP1  <---------ANAC58 ---ARR14(2)                                      <---------ARR14(3) -->ARR14(2)                              --------->ZAT2  <---------ANAC58 ---ARR11(3)                              --------->At4g35610<---------ZAT2 -->ARR11(3)                        --------->At4g35610  ------>NtERF2                             <- --HSFB2a(1)               --------->At4g35610    --------->ARR14(3)                            <---- -->ARR10                  <---------At4g35610    <---------ARR14(2)                           <-----   tgtgccagtccttcttgcattagaactacagctaaatcagcactagctgcaagatctgaggcctgcttgagtgtatcaagagccagtgagtcccaatttt  21611800                                                         ------>ZmHOX2a(1)                                                       <---------ICU4                                                      <---------ATHB12                      ---------                                                     ------>MYB83                        <---------ANAC46                        --------->At4g35610          ------>MYB46(1)                    --------->LBD16        --------->YAB1  <---------At4g35610        --------->AtMYB61                   --------->LBD16        --------->AHL20(2)                         --------->MYB46(3)                 <---------LBD16 ---------DOF2       ---------->DOF2             ------->TEIL                --------->ARR11(3) -------GT1  --------->DAG2                    --------->ZAT18               <---------ARR11(3) ----- ------GT1 ---------->DOF2         ---------->DOF2 <---------ALFIN1         --------->YAB1  <--------   cctttctcaataaaaaaggtcgtttaagctcaatctccaaagtatggaatgcaccaatccttacatgctcgttctccatgatattcttcccgcgtatgcg  21611900                                                                                   <----------DOF2                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                 <---------RVE1(1)                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)                                                                                <---------ARR14(2)                                                                       --------->LBD16                        <---------ALFIN1                             <---------LBD16    <----------DOF2                       <---------ZAT18                          <-------TEIL    <-----------ARR10         ------>NtERF2 --------->ZAT18                        <-------MYC3      --------->ARR14(3)        --------->DEAR3(1) --------->AtMYB61                  ------->MYC3      <---------ARR14(3) >ARR14(2)       --------->YAB1                               <-------MYC2      --------->ARR14(2) ---->LBD16     <---------YAB1 ------>ZmHOX2a(1)              ------->MYC2  ---------->DOF2     <---- -ARR14(2)  <----------DOF2<---------ALFIN1              <-----------GT1  ----------->HVH21   <------   cataacatcgccgtctttgtcatagtccacctcctcaacttgtacttctagcttaagtttaacacgttcagtccgggtgaaagatcttttctttccaagg  21612000                                                          <---------HSFB2a(2)                                                          --------->HSFB2a(2)                                                     <----------DOF2                                                     <---------DAG2                              ----                                                   ------>MYB46(1)                       ------>NtERF2                                                   ------>MYB83                        --------->LBD16                                                 <---------MYB111(2)                 <---------LBD16                                                 --------->AtMYB61                  ------>ZmHOX2a(1)    <----------DOF2                              <---------ALFIN1               <---------ARR14(2)   <---------ANAC58                              --------->MYB46(3)             --------->ARR14(2)   <---------ANAC58                              <---------MYB111(1)        --------->ZAT6     ------ -----ARR11(3)                               --------->MYB46(3)             <-----------GT1   <------ ---TOE1(2)                                --------->REM1(1)---------->DOF2--------->ZAT14  ---------   tatttgctttctattcgacttagcgatggagtcgagtctcttccttcaccaccaacttttctgaaagtgatagccattacactatcctccgggccaatca  21612100                             <---------At4g35610                             ------>ZmHOX2a(1)          <-------TEIL                             --------->At4g35610      --------->ARR14(2)                           --------->ZAT18            <---------TCP16(1)                           <---------ZAT14          --------->LBD16               --------->ATHB12                         --------->ARR14(2)        <---------ANAC58              <---------ATHB12  <---------YAB1 <------ZmHOX2a(2)                 <---------ANAC46          <---------ANAC58 ------->GT1     ===================HOX2a_HOX2a    --------->HSFB2a(2)       <---------ANAC58 --->YAB1       <---------ARR11(3)         <-----------GT1               <---------ANAC58          <- ---ATHB12      --------->ARR11(3)   --------->YAB1<---------ANAC58      <---------ANAC58         <-- >WOX13(1)     --------->GLK1(1)------>NtERF2     <---------LBD16     <---------ARR11(3)    <--------   ggttataagtataccagagatcatccgagtcctctgccatcatcttaacgcttccgggtccattacgaacaaaatccttgcgaatgattttcatctttca  21612200                       --------->YAB1                     --------->MYB52(1)                   <---------MYB52(2)                 <---------------AGL15                 --------------->AGL15              <-----------GT1          <---------CCA1(1)          <---------RVE1(1)                                    <------MYB83         <---------ARR11(3)--------->ARR14(2)               <---------SPL7              ----------->HVH21         --------->ARR11(3)<---------ARR14(2)             <---------TOE2(3)     --------->WOX13(1)       <---------TOE1(3)   --------->GLK1(2)     ------>ZmHOX2a(2)            <---------ATHB12 --------ARR11(3)--------->ZAT6     <---------KAN4(2) <------------CBF      --------->WOX13(1) ----ZmHOX2a(1) ----------------->AGL2       --------->ETT(2)  <------MYB46(1)------------>CBF --DOF2<---------TOE2(3)  <---------GLK1(2)  <---------ETT(2)<--------P   ------------>CBF   ggatttttgaaggtattttccactaacagaatctgaagaataaactgtcgatcggaaattgtggtagggaatgaagaacaatcaatcgctctgacaagaa  21612300                                                                                     <-------TEIL                                                                                  --------->CCA1(2)                                                      ==============================HOX2a_HOX2a                                                      ------>ZmHOX2a(2)          <---------ARR11(3)                                                     <---------At4g35610         --------->ARR11(3)                                                     --------->At4g35610     ------>ZmHOX2a(1)                                              <---------MYB52(1)             --------->LBD16               --------->TOE2(3)<---------ANAC58    <---------AGP1         ----------->RAV1(2)         --------->AHL20(2)     <---------ANAC58<------------CBF         ------>ZmHOX2a(2)          <     --------->AHL20(2)    <----------DOF2    <---------YAB1            <---------GLK1(1)       ----- ----------->GT1  ---------->DOF2         <---------At4g35610          <---------ARR11(3) <----------   gagaagaaaaaataaaaacttaaagtaaacttttgcttaaattaagctgttattgatctgaagaaatagacttgatctcctgagatatacatatttatag  21612400                                               <-----------GT1                                           <---------ARR14(2)                                        <---------ANAC55(2)                                        --                                        --------->ANAC55(2)                                       ---                                    <------ZmHOX2a(1)                   <---------ANAC46          <--                                --------->TOE1(2)                      <---------LBD16           <---                           <------ZmHOX2a(1)  <-----------GT1       <------------CBF             <--- ---------STY1(2)       <---------HSFB2a(2)--------->ARR14(2)    --------->ANAC55(2)           <----- ---->STY1(2)           --------->HSFB2a(2)------->TEIL   <------------CBFxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -TBP---------->DOF2  <---------------------WRI1  <----------DOF2<---------ANAC55(2)          <------   ctagctataaagcttacataagtcgtctaggaaaactaggaaacgtattttccttttctacattgttaagtattggggatagagattaatctcattagga  21612500         <---------ARR11(3)         --------->ARR11(3)    ------>ZmHOX2a(1)                                                               <----------DOF2 ------->KAN4(2)                                                                 <-----------GT1 ------>KAN4(1)                                 <---------ARR11(3)            <---------YAB1 -------KAN4(1)                                 --------->ARR11(3)           --------->AHL20(2) ------KAN4(2)                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->AHL20(1) ------YAB1        <---------ICU4     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ICU4       ---- -ZmHOX2a(1)   <---------YAB1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         --------->ICU4        <--- ---YAB1<---------CCA1(2) ------>ZmHOX2a(1)    <---------CCA1(2)        --------->AHL20(2)   xxxxxxxx   ttattcctatatatcttctgattatgtcctatattttagggactagagtatatcttatacgatgtctctcttgtataaatattatactttgtgaatcaat  21612600                                                                                                   <-                                                                                                  ---                                                                                                  ---           <---------ZAT18                                                      --------->YAB1  -----           --------->ZAT18                                           <-------GAMYB              -----           <---------ZAT14                                          <---------MYB46(3)       --------           --------->ZAT14                              ------>ZmHOX2a(1)     <---------ARR11(3)<---- ----->AHL20(2) <---------ARR11(3)        <---------AHL20(2)        --------->MYB111(2)     --------- ------AHL20(2) --------->ARR11(3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------YAB1<------- xxxxxxxxxxxxxxx>smallRNA(si3)      <----------DOF2    --------->TOE2(3)      --------->ARR11(3)<----   aaaatcaagttagtgcaatatctaattctacatagtttctttatttcattagagcatccttatccataggttgttaacaatatcataagaactattaaaa  21612700  Previous    Next  AGI:  At3g58390.1    Description:  eukaryotic release factor 1 family protein / eRF1 family protein. similar to PEL1 (PELOTA), translation release factor [Arabidopsis thaliana] (TAIR:AT4G27650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23009.1); contains InterPro domain Probable translation factor pelota; (InterPro:IPR004405); contains InterPro domain eRF1 domain 2 (InterPro:IPR005141); contains InterPro domain eRF1 domain 3 (InterPro:IPR005142); contains InterPro domain eRF1 domain 1 (InterPro:IPR005140) Range:  from: 21611007    to: 21612194    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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