AthaMap TU-Logo
Search
 
   Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
Go to graphical and table display 

1        10        20        30        40        50        60        70        80        90        100 
                                                                                              ------
                                                                 --------->YAB1<---------ICU4 <-----
                              ------->MYC3                ------->TEIL        --------->AHL20(2)
          <-----------GT1     <-------MYC3         --------->AtLEC2---------->DOF2        <---------
  ---------->DOF2     --------->YAB1          <-----------GT1   <---------ATHB12  <-----------GT1
---------YAB1     <---------AHL20(2)  <----------DOF2<---------AtLEC2         --------->ICU4 <------
 
tgatgaaaagtattcacttattcaattttaaaacgtgtttcctttgtttctaccatgcatgaaactaatcaaaagctagaaatatttacctctctttacg  21592400
                                --------->ANAC58                    --------->ATHB12               -
                                --------->ANAC58                    <--------ATHB1                 <
                            ---------->DOF2                        --------->ICU4         <-------TEIL
                          --------->LBD16                          <---------ATHB12      --------->CCA1(2)
 ------->TEIL             --------->At5g28300                --------->ANAC46           --------->ARR14(2)
--->ANAC55(2)            ----------->GT1                     --------->ANAC58           <---------ARR14(2)
----TOE2(3)              --------->TOE2(3)             --------->AtLEC2               --------->LBD16
-DOF2              <-----------GT1                <-----------GT1  <---------YAB1    <---------HSFB2a(2)
---LBD16         <---------WOX13(1)     <---------ANAC46     --------->ANAC58        --------->HSFB2a(2)
 
gatgaatgctctgaaatttgatttactaccgtaaaacgaaattgtgtatattgtctccatccacaaggcaatgattcgaaatcaacttccagatacagag  21592500
                                                                     --------->ATERF1(1)
               <---------AHL20(2)                                    ----------->RAV1(2)
             <---------YAB1                              --------->ANAC58
            <---------AHL20(1)                           ----------->GT1
           --------->AHL20(2)                            --------->ANAC58
           --------->ATHB51                           --------->ARR14(2)  <---------HSFB2a(2)
          --------->ICU4                          <---------LBD16   ------>NtERF2
          <---------YAB1                   <---------ANAC58         <---------ATERF1(1)
          <---------MYB52(1)               <---------ANAC58        --------->ANAC58
       <---------YAB1                   <---------MYB52(1)    ---------->DOF2                     --
-------->ANAC55(2)                    <---------ICU4  <---------ARR14(2)  --------->HSFB2a(2)   ----
---------ANAC55(2)                   <---------YAB1 --------->LBD16--------->ANAC58    ---------->DOF2
 
acaagtgatcaccattattttttttgaataacaagtgatcaccattacttccctccggataggcaaaaagacgcctgccagaaacaaaaaaaaagatgaa  21592600
                                                               --------->AHL20(2)
                                                               <---------AHL20(2)
                                                           --------->AHL20(2)
------->GAMYB                ----------->GT1             --------->TOE2(3)
------>P---------->DOF2 <----------DOF2               <-----------GT1                           ----
----->MYB46(3)    --------->AtMYB61                --------->YAB1     ---------->DOF2     ----------
 
caacccaaatgaaaagaatcaccaaaactttatagttatatacacatatgtctaatataacattatttaaaatgaaagagaacatttggaatggaaagaa  21592700
                        --------->TGA2(2)
                       <-----------TGA1
                       <---------RAP2.6(3)
                       <-----------HVH21
                      <---------bZIP60(1)
                      <---------O2 <---------ARR14(2)
                      <---------TGA2(1)   <------ZmHOX2a(2)
                      --------->bZIP60(1)--------->ARR14(2)                <------ZmHOX2a(1)
<---------ARR11(3)    --------->TGA2(1)  <---------ARR14(2)               ----------->GT1
--------->ARR11(3)    --------->O2 --------->ARR14(2)                     <----------ID1
--------->AHL20(1)    --------->ANAC46 --------->LBD16        <---------YAB1
------>DOF2          ----------->STF1<---------LBD16    --------->GLK1(2)----------->GT1
>DOF2       <-----------GT1    <------ZmHOX2a(2) --------->YAB1      ---------->DOF2<----------DOF2
 
aaagatattgtgtttttaccaattgacgtcatggatcagaaccggatcagaaacataacaatcttgtaattgcaaagaggaaaaattctttataacccaa  21592800
                                                      ----------->GT1
                            <---------bZIP60(1)      --------->ANAC58
                            --------->bZIP60(1)  --------->ANAC58
                        <---------WOX13(1)  ------>ZmHOX2a(1)                                   ----
                      <---------ICU4   <---------GLK1(2)                                        ----
                      --------->ATHB12<---------HSFB2a(1)                                    ------>MYB46(1)
                     <---------YAB1   --------->HSFB2a(1)                                    ------>MYB83
                     --------->ICU4---------->DOF2   --------->ANAC58                      ---------
                  <-------TEIL   <---------YAB1  --------->ANAC58   <----------DOF2        <--------
 
acaaacttcttatcacatgggttcatgattgatgtcatgaaagattcctcgttcgcaaggaaacaaaactcctttaaaactcaaattttgtaaaccaaac  21592900
                                                                                             <------
                                 --------->AHL20(2)                                     --------->DAG2
     <----------DOF2             --------->YAB1          <---------ARR11(3)            ---------->DOF2
 <---------ATHB12            --------->AHL20(2)        --------->ANAC58           --------------->AGL15
----->TOE1(3)                <---------AHL20(2)        --------->ANAC46           <---------------AGL15
----->TOE2(3)    <---------AHL20(2)                    --------->ANAC58           <----------DOF2---
>AtMYB61        --------->AHL20(2)        <---------TOE2(3)                   <---------GLK1(1)  ---
-MYB59    <---------TOE2(3)  --------->ICU4       --------->ANAC46            --------->GLK1(1)  ---
 
cctaatcactttcaaggtataaaatagaagaaaaaattataaactaagattccactccaagaaattttgaaaatcgagcagaattctttaaaaagttacc  21593000
                                                                                        --------->YAB1
                                                                                 --------->TOE2(3)
                                                                                ----------->GT1
                                                                              --------->MYB52(1)
                                                                              ------>MYB83
     <------------CBF                                                         ------>MYB46(1)
--------->CCA1(2)              --------->HSFB2a(2)                           --------->MYB55(1)   --
---At5g28300                   <---------HSFB2a(2) --------->ANAC46         <---------MYB59      <--
------>ANAC58              <-----------TBP         --------->ANAC58         <---------MYB46(2) -----
------>ANAC46           ----------->GT1 --------->MYB52(1)               <---------ARR14(2)   <-----
------>ANAC58       ---------->DOF2---------->DOF2 --------->ANAC58      --------->ARR14(2) <-------
 
acgatatgaattggaatagagactaaagggttttatagaaaaggaacggagactacgaaaacaaactttttaagcgtaacctaacgtaaaatcatatata  21593100
      <---------CCA1(2)                                                            <---------GLK1(2)
     <---------ARR11(3)                                                            <---------ARR11(3)
     --------->ARR11(3)                                                  <-------TEIL
     <---------AHL20(1)                                              --------->AHL20(1)
     --------->AHL20(1)                                              --------->AHL20(2)
--------->GT1                    <------------CBF                    <---------AHL20(1)
-------TOE2(3)                 --------->ARR11(3)                    <---------AHL20(2)      <------
----->DOF2    <---------DAG2   <---------ARR14(2)                   <---------AHL20(2)       <------
----AHL20(2)  <----------DOF2  <---------ARR11(3)                   --------->AHL20(2)       <------
----TBP--------->ARR11(3)      --------->ARR14(2)            ----------->RAV1(1)   --------->ARR11(3)
 
aaggaaaatatatctagctttttttttggtaacagatattgttagataaactttagacattttccaacaaaataaattcatctatagattttcttagcgt  21593200
                  <-----------GT1                                 --------->GLK1(2)
        --------->AHL20(2)                                       --------->ARR11(3)
   --------->ANAC58   --------->TOE1(3)                          <---------ARR11(3)
   --------->ANAC58   --------->TOE2(3)            <---------AHL20(2)
---ANAC58  --------->ARR11(3)                  --------->YAB1    <---------GLK1(2)                 <
---ANAC46  <---------ARR11(3)          <---------AHL20(2)    ---------->DOF2   <------ZmHOX2a(1)   =
---ANAC58<---------AHL20(2)      <------ZmHOX2a(1)--------->AHL20(2)--------->TOE2(3)            <--
 
ataagtaagaaataaatctttaaacccttaaatataggagatttattcgagcataaaattcgaataaagattcttaaatataggagatttattctcatct  21593300
<- Previous    Next ->

AGI:  At3g58290.1   
Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G58340.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ74843.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39873.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974)
Range:  from: 21591549    to: 21592838    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

    printer-friendly version