Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ICU4                               <----------DOF2                                  <---------YAB1                       <---------ZAT6                           <---------AHL20(1)  --------->AHL20(2)                 --------->ARR11(3)                             --------->ARR11(3)  <---------AHL20(2) ------->bZIP60(1) <---------ANAC58               <---------ARR11(3)   <---------At4g35610   -------- --------bZIP60(1) <---------ANAC58  --------------->AtSPL8<-----------HVH21    <---------AHL20(2)   gatgtctcaatgtgtttgagttcttgtgttagtctttatcttgtactatcaagaactcaaatgtcatatattgagcttattttttattaattccattatc  21406200                     ----------------->AGL1                                                       ---                   --------->ANAC58                               --------->ICU4               ------     --------->ARR11(3)              <-----------GT1            --------->YAB1                 <-----     <---------ARR11(3)       --------->At5g28300       --------->AHL20(2)               <---------ANAC58 ---------->DOF2   --------->ANAC58<----------DOF2      <---------AHL20(2)               <---------ANAC58 ->ATHB51 <---------AHL20(2) ----------->GT1 ------>ZmHOX2a(1) <---------ZAT6          --------->ARR11(3)   gaataaagacatttttttggccagccagagagggtaactttactctcctaagtgtgaattttttagtgatgatgtctcaatgtgtttgagttcttgctgc  21406300                                                             --------->ATHB12                                                           <---------WOX13(1)                                                         --------->ATHB12  --------->ARR14(2)                                               <------ZmHOX2a(2)           <---------ARR14(2)     <----------DOF2                          --------->ARR11(3)  <---------ANAC58   --------->ANAC58     --------------------->WRI1  <-----------HVH21      <---------YAB1 <---------LBD16 ----->P                      <---------At4g35610     <---------ANAC58 --------->HSFB2a(2)          < --->At4g35610                --------->At4g35610     <---------ANAC58 <---------HSFB2a(2)       ---- ----At4g35610          <---------ARR11(3)    <---------ARR11(3)  <---------ANAC58   --------->ANAC58   tacctgtctttgtatttttctatcaagaactcagatgtcaaatattgagatcattttcttgattgatttcgttctcggatagtggataagccaaatagat  21406400                                                                                                    -                                                                                                -----                                                                       ------>NtERF2            <----                                                                      --------->DEAR3(1)     --------         >>>>>>>>>>>>>>>>>LFY                   ---------->DOF2     <---------At4g35610    <--------P         ------>NtERF2                <------MYB83                  --------->At4g35610  <---------MYB46(3)   <----------DOF2                    <------MYB46(1)   <---------ALFIN1              <----------DOF2 -----------GT1                     <--------P------>ZmHOX2a(1) <----------DOF2  ==================== ------->GT1  <---------ZAT6      <-----------RAV1(1)<---------WRKY38(1)         <-----------------AG   agtaactttgcctccagtgtgaacacatttagtctcatgttggtgctcctcaaagtcaacacatttctttagccgactacattactcgctttggttagtg  21406500         <---------------AGL15         --------------->AGL15         <---------DAG2         <----------DOF2       ------>MYB46(1)       ------>MYB83      <---------ALFIN1       <---------AHL20(2) -------->AtMYB61           ------------>CBF                            --------->YAB1 ---->ZAT18        --------->ZAT18         <---------ANAC58            <-------TEIL            <----- -----ZAT18        <---------ZAT14         <---------ANAC58           *TSS                 ---------- ->MYB52(2)     <---------ZAT6   --------->YAB1                 <---------At4g35610        <---------TOE2(3) ========================MADS_MADS <---------YAB1               --------->At4g35610    ----------->RAV1(2)   gaccatacccactttttagagtaaactatattcaattttgatatggcttccttccttctcttattctgcagcattcatggtgttttcgcttctgaggtac  21406600                                   <---------TOE2(3)                               <---------YAB1                    <----------DOF2                    <                             <---------ICU4                   <---------ARR11(1)                    <                             --------->ATHB12                 --------->ARR11(3)                   --                            <---------YAB1                    <---------ARR11(3)                 <---                            --------->ICU4         <---------ANAC58                            ------                    <---------ANAC58    <------MYB83         <---------CCA1(2)                <------ --TEIL             <---------ANAC58    <------MYB46(1)---------->ID1                       <-------- ----->AtSPL3       <---------ANAC46  <--------P   <---------ANAC58  <----------DOF2 --------->ATHB12   aatttcaattctgagttcaatttcgtagacattattagaggttggattccatttcttgtcttcatatctttctttccattttggtgttcattagctttca  21406700    <----------ID1 ---------ANAC58 ---------ANAC58               <---------ICU4                                  --------->ALFIN1 ------->ATHB12                <---------AHL20(2)                           --------->DAG2 ------WOX13(1)          <-------GAMYB                                     ---------->DOF2 --->ATHB12             ----------->GT1                                 <---------HSFB2a(2) ---YAB1           <---------At4g35610                                <------ZmHOX2a(2) --DOF2            --------->At4g35610                 <---------ANAC46 --------->HSFB2a(2)<---------AHL20(2)   ttgattgtgacaaaacttatcaactgctgttaaatatttctaagttccagtcttgttctgtggagaatagagatcgagaaagtgggattgtttttatttg  21406800              <----------DOF2              <---------DAG2     ------>ZmHOX2a(2)    <------ZmHOX2a(2)    --------->CCA1(2)                                                                            <---   >>>>>>>>>GATA-2                                                                         <---------At4g35610   --------->AGP1                   <--------ATHB1                                         ----------   <---------ARR11(3)               --------->ATHB12             <---------MYB46(3)    --------->ARR14(2)   >>>>>>>>>GATA-4                 <---------ATHB12            <---------ZAT2          <---------ARR14(2)   >>>>>>>>>GATA-3       --------->ZAT14                       <---------At4g35610    <---------GLK1(1)   >>>>>>>>>GATA-1<-----------GT1  --------->ICU4     <----------DOF2      --------->ZAT18 ------>ZmHOX2a(1)   --------->ARR11(3)    <---------ZAT14      <---------GLK1(2)--------->At4g35610    --------->GLK1(1)   ctagagatctaatctacttttctccattgcagtaccaatgatttgaaatattctctctttatttcagctgttgagagtggattaatggagttcctctgag  21406900                                                                <---------ANAC58                                   --------->ARR11(3)           <---------ANAC58                                   <---------ARR11(3)          <---------MYB46(3)                              <------ZmHOX2a(1)                <------MYB83                            <---------TOE2(3)                  <------MYB46(1)               --------                     <---------ZAT18                          <---------AtMYB61           --------->ANAC58            <---------AHL20(2)--------->YAB1                 <---------WOX13(1)        --------------      --------->ANAC46      <---------TOE1(3)              --------->ATHB12       --------->YAB1 ---ZmHOX2a(1)   <-----------RAV1(1)                  <---------YAB1            --------->GLK1(2) ->RAV1(2) --------->AHL20(2)----------->GT1      <----------DOF2          ---------->DOF2--------->ANAC58   gagtttacacacattaaatctggtgctcttaaggataaatcttgtagagagtctttacgatggattggttgagaacaaaaagaatcagagccaagaaaag  21407000                                  ---------->DOF2                                --------->HSFB2a(2)                                <---------HSFB2a(2)                            --------->ARR11(3) <--                           <---------MYB46(3)                                  <---------ARR11(3)----                     <---------ANAC58                                     <---------ATHB12       <---   <------ZmHOX2a(1) <---------ANAC58                                   ------>ZmHOX2a(1)--------->SPL7 -->DOF2             <---------ANAC46                                   ============================= --->AGL3 ---------->DOF2 <--------P                  <---------YAB1XXXXXXXXXXXXXXXXXXXXX>MIR856 ----   gaagaggaatgtcaaagagaatggcgaggttgttctaaaagagctcattgaatgttgtgatggaaaatgcaatcctatcaagaacttctcttacgaccag  21407100  Previous    Next  AGI:  At3g57750.1    Description:  protein kinase, putative. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G57700.1); similar to OSJNba0093F12.22 [Oryza sativa (japonica cultivar-group)] (GB:CAE03948.3); similar to wall-associated kinase 1 [Triticum aestivum] (GB:AAY34780.1); similar to Os04g0599000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053747.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 21405001    to: 21406265    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g57760.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G57740.1); similar to wall-associated kinase 1 [Triticum aestivum] (GB:AAY34780.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 21406570    to: 21408221    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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