Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->CCA1(2)                   --------->ARR11(1)              <---------ARR14(2)             <---------AHL20(2)                   --------->ARR11(3)      --------->AHL20(2)                     --------->AHL20(2)                   <---------ARR11(3)  <---------AHL20(2)                         --------->AHL20(1)                <---------TOE2(3)     <---------AHL20(2)                       --------->YAB1        --------->ARR11(3)            --------->AHL20(2)                      <---------YAB1    >>>>>        <---------ARR11(3)  --------->RVE1(1)      --------->ARR14(2) ---------->DOF2  --------->AHL20(2) -MYB46(3)     ---------->DOF2    <---------MYB52(1)               --------->YAB1 <---------AHL20(1)   ttatttcataaatcttttaaagatatgaaaatatcagttattaaataaaacagtatccaaaacaactaaaaataaagactataataaaatgaaatagttg  21244300                                                                                   <---------YAB1                                                                                   <---------HSFB2a(2)                                                                                   <---------TOE2(3)                                                                             --------->AHL20(2)              --------->YAB1                                                 <---------AHL20(2)          <---------------AGL15                                             <---------AHL20(1)          ===================HOX2a_HOX2a      ----------->GT1               --------->YAB1          ------>ZmHOX2a(1)       >>>>>>>>>>WRKY63                          <---------AHL20(2)          --------------->AGL15   <-----------GT1<-----------GT1    --------->AHL20(2)       <-------         --------->TOE2(3) <----------DOF2   --------->DAG2   --------->ANAC58  --------->ICU4      <-----------GT1 <------ZmHOX2a(2)     ---------->DOF2   --------->ANAC58  <---------ATHB51  --- >>>>>WRKY26 <---------YAB1<---------DAG2<---------AHL20(2) ---------->DOF2 --------->AHL20(2)    <--   atcaaatatttccttattatagggatcaactttatttgactatataaaaagtaacatttctgtaaagcaataaaacaataaaattatggaagattaagtt  21244400                --------->YAB1            ---------->DOF2          --------->YAB1          <---------AHL20(2)    ----------->GT1                         ----------->GT1                         --------->ANAC55(1)    --------->ANAC55(2)            --------->ANAC58                                 --------->ANAC46    --------->ANAC58               --------->ANAC58                             --------->CCA1(2)  <-    --------->ANAC58          --------->ANAC58                                 --------->ARR14(2)  --    --------->ANAC55(1)       --------->ANAC58                                 <---------ARR14(2)  --    <---------ANAC55(2)  <---------MYB59  ---------->DOF2                   <------NtERF2         --- --TOE2(3)--------->AHL20(2)---------->DOF2 <----------ID1           --------->DAG2 --------->ANAC58- ------>HSFB2a(2)  <---------ICU4  ------------------------>ANAC81  ---------->DOF2 --------->ANAC58< -------HSFB2a(2) --------->ICU4 ---------->DOF2           ----------->GT1<---------DEAR3(1)      <--   ttagaaacgtaataaaaagcatgatgacctaaaagcaaagccaaaaaagaaaaaccctagaagataaaaaaaaagggaggcgatacacgaaatagagaag  21244500                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                              <------                                                                                              -------                                            ---------->DOF2                                   <------                                          <---------------AGL15                              --------                                          <---------HSFB2a(2)              --------->ANAC58  --------                                          --------------->AGL15            --------->ANAC58  <-------                                          --------->HSFB2a(2)            ---------->DOF2     ========                                          ===========================================================                                          ===========================================================                                         ----------------->AGL3       --------->AtLEC2       ========                                         ----------------->AGL2       ------>MYB83           --------                                         ----------------->AG         ------>MYB46(1)        <-------                                         ============================================================        --------->AtMYB61                ============================================================ --------ARR11(3)                        ============================================================ ------->AGP1                        --------->HSFB2a(1)              --------->ANAC58       <------- ------->ARR11(3)       <---------YAB1   ----------------->AGL1       --------->ANAC58      ------>NtERF2 ------>GLK1(1)     <-------GAMYB    --------->HSFC1(2)               --------->ANAC46     --------->RAP2.6(2) -------->CCA1(2)  ----------->GT1   <---------HSFC1(2)          --------->ANAC58       --------->ANAC58 ------ZmHOX2a(2)  <---------ANAC58  <---------HSFB2a(1)         --------->ANAC46       --------->ANAC58 -------GLK1(1)    <---------ANAC58---------->DOF2               --------->ANAC58     ---------->DOF2   agatccaaaaccaaaacaagggcgttataaatgggaagaaagttccaaaagaagaaaacagccactcacaccaagcaaagcaaattagcaaagccaccaa  21244600           <---------------AGL15          <-----------------AGL3          ----------------->AGL3      <------------CBF ----------->GT1 ------ARR14(2) ----->ARR14(2) ->MYB83  <-----------------AGL2 ->MYB46(1)--------------->AGL15 ---MYB111(1) -------->AGL15 ---------AGL15 --------->AGL2 --------->AGL1 ----------AGL1 ==========================MADS_MADS ==========================MADS_MADS =========MADS_MADS ==========================MADS_MADS --------->AGL3                              --------->TOE2(3)          ------>ZmHOX2a(1) ----------AG<-----------TBP           <---------AHL20(2)              --------->TOE2(3) ==========MADS_MADS                  --------->AHL20(2)        <-----------GT1 <----------DOF2 =========MADS_MADS                --------->AHL20(2)      ------>ZmHOX2a(1)   <---------DAG2 ==========MADS_MADS           <----------DOF2            <---------MYB59     *TSS ----------AGL3   --------->YAB1 <-----------TBP     --------->MYB59   --------->TOE1(3)   atatggaaaattgctacttatagtaactcccatctttttatataataccctaattttggtcctaattttccttccttagcccctttcccaatatttgatc  21244700                                                          --------->GLK1(1)                                                 --------->GLK1(2)                      <---------GLK1(2)                                                 <---------ARR11(3)                     <---------ICU4                                  ------>ZmHOX2a(1)--------->TOE2(3)                 --------->YAB1                               ------>ZmHOX2a(1) --------->ARR11(3)                 <---------YAB1    ---------->DOF2 ------>ZmHOX2a(1)------>ZmHOX2a(1)    <---------GLK1(1)  ------>ZmHOX2a(1)   aatttctaaagaaaaccccttcctctactagtcctcctcctatatatacaaaatcttaagaaatctctctacttgtttcctctgttatcataatctcttc  21244800                                                                                                 <---                                                              <---------WOX13(1)             <------ZmHOX2a(1)                                                            --------->ATHB12         <---------LBD16                                                           <-------TEIL           --------->CCA1(2)                                                          <--------P             <---------ARR14(2)                        <---------At5g28300            <---------TOE2(2)         --------->ARR14(2)    --------->ARR11(3)  <-----------GT1         ---------->DOF2                  --------->ARR11(3)    <---------ARR11(3) <-----------GT1         --------->ANAC46                  <---------ARR11(3)   <---------CCA1(2)<----------DOF2   <-----------GT1 <-----------RAV1(2)        --------->ARR11(1)   tctctatatctcttctcttcttcttttaccctgttttttttttcattccacagagcccaggttgattgattttgttattcagagatatggggagaggaag  21244900                                          <----------DOF2                                          --                                    --------->ANAC58                                               --                                    --------->ANAC58   --------->ANAC58                    <---------GLK1(2)                                <-----------HVH21      --------->ANAC58               <----------DOF2                            ------->GAMYB <---------DAG2  --------->MYB52(1)       <---------ARR11(3)  <---------TOE2(3)        --------->MYB46(3)        --------->CCA1(2)             --------->ARR11(3) ---ZmHOX2a(1)   <---------TOE2(3)  --------->O2    <----------ID1             ---------->DOF2    <--   gattgagattaagaagattgagaatatcaacagtcgtcaagtcactttctctaagagacgaaacggtttgatcaagaaggctaaagagctttcgattctc  21245000                                           --------->CCA1(2)                                          --------->ARR11(3)                                          <---------ARR11(3)          <--------P               <---------ATERF1(2)      ------>NtERF2                --------->ATERF1(2)     --------->DEAR3(1)            <-------PIF5    <------NtERF2                  ------->PIF5<---------YAB1   ------>NtERF2                   --------->DEAR3(1)                                            <---  <---------bZIP60(1)              --------->DREB2C(2)                                       <-------  <---------ANAC46              <---------ALFIN1                                     --------->ICU4 --------->HVH21               --------->ZAT2 <---------TOE2(3)               --------->YAB1 <------- --------->TGA1                <---------ZAT2<-----------GT1                 <---------YAB1 <-------- ---------HVH21     --------->YAB1<---------LBD16               ----------->GT1      <---------YAB1   tgtgacgccgaggttgctcttatcatcttctccagcaccggcaagatttacgatttctccagcgtctggtatattagttatcatctcatgattttgcttc  21245100                                                                                                -----        <----------DOF2                                                                     <--------       <---------ANAC58                                                                     ---------       <---------ANAC58                                                                   <---------ARR11(3) -------DOF2                       <---------YAB1                                        <---------CCA1(2) --ANAC58            ---------->DOF2                                                 <<<<<<<<<GATA-1 --ANAC58  <---------LBD16        --------->AHL20(2)     --------->AHL20(2)--------->MYB46(3) ------>ZmHOX2a(1) ----------------ANAC81           <---------AHL20(2) ---------->DOF2      -------->P<-----------GT1   tttttttttgctttggggaaataaaaagttttgcatttttatgggtttttgtgtctaaagtaaatgaaaacagagcaacccctgtttatctatatcctaa  21245200  Previous    Next  AGI:  At3g57390.1    Description:  AGL18 (AGAMOUS-LIKE 18); transcription factor. similar to AGL15 (AGAMOUS-LIKE 15), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G13790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23610.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 21244678    to: 21246888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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