Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ---------->DOF2                                                                          --------->YAB1                                                                       --------->YAB1                                                                    --------->HSFB2a(2)                                                                    <---------HSFB2a(2)                                                                <---------SPL7                                                               <---------ANAC46             ---------                                                               <---------ANAC58             <--------         --------->AHL20(2)                                    <---------ANAC58          --------->AHL20(2) --AHL20(2)      <---------AHL20(2)      --------->AHL20(2)   --------------->AtSPL3     --------->YAB1 >AHL20(2)     <---------AHL20(2)      <----------DOF2      <-----------RAV1(1)    ----------->GT1   gaagtgtccatttacatatatttttgaattttaaaaatgcgcttttaatattagacagactactgtcgtactagaataataaagaatgtaataaaaaaat  21188300                      ------>MYB83                      ------>MYB46(1) ------->MYC3                     --------------->AGL15      XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B<-------MYC3      --------->GLK1(2)              --------->O2      <---------ARR14(2)             <---------O2      --------->ARR14(2)             --------->TGA1a                                              <--  <------ZmHOX2a(1) ----------------->AGL3            --------->ANAC58                            --- ----------->GT1    ----------------->AGL2            --------->ANAC58  ----------->GT1          ---- >AHL20(2)  ---------->DOF2--------->HSFB2a(2) --------->YAB1      --------->AHL20(2)            ---- -AHL20(2)  ===================================bZIP_DOF        <---------YAB1        <----------DOF2   agaaggagaatcggaaaagaaacccacttatagaatgccatgtgtcaaaacataacaagcgaagtatgtttatatagtaagaaaactcttttgccctaaa  21188400                        ------>ZmHOX2a(1)                       --------------->AGL15                       <---------------AGL15                      <-----------------AGL1                      ----------------->AGL3                      ----------------->AGL2             <---------TOE1(2)        <-----------HVH21  <-----------RAV1(1)     <------------CBF <-----------------AGL3                         <----------DOF2 -------ARR11(3)      <-----------------AGL2                 <----------DOF2 ------>ARR11(3)      ----------------->AG              <----------DOF2 ----->RVE1(1)     <----------DOF2          <----------DOF2  <---------DAG2<------ZmHOX2a(2)  ------- ----->CCA1(1)   <------------------------ANAC81  <----------DOF2---------->ID1               <------   tatcccaaattgtcatatgttctttccttatgtggctctctcttctctttctctttctctttcctttttctctttcgatcaacaaaaccacatctctgaa  21188500                                                      --------->LBD16                                                     --------->ANAC46                                                     --------->LBD16                                                    <---------LBD16                                           --------->GLK1(1)                                           <------ZmHOX2a(2)                                          <---------ARR14(2)                                          --------->ARR14(2)                                          --------->ARR11(3)                                          <---------AGP1                                          <--                                          <---------ARR11(3)                                     <---                                          <-----------ARR10                                   <------                                          <---------ARR14(3)                   ----------->GT1-------                          <---------MYB52(1)------>ZmHOX2a(2)                 --------->DAG2 <-------  ------------>CBF       --------->LBD16  --------->AGP1                     --------->DAG2  -------- -->ZAT14              <---------LBD16    --------->ARR14(3)      --------->KAN4(2)     ------------>CBF ---ZAT14        <-----------------AGL1  <---------CCA1(2)<------ZmHOX2a(2) ---------->DOF2  <-------   ctgaaccaatttctcttctcccccttccggttatcggattaccagatctcgtttcccgcgatctagtttattctttgaaaaaggtaaatgttcaattttt  21188600          <---------GLK1(2)--------->LBD16       --------->YAB1    <-----------RAV1(2)  --------->AHL20(2)  --------->ARR14(2)  <---------AHL20(2)  <---------ARR14(2) -------AHL20(2)   --------->LBD16 ------AHL20(2)   <---------LBD16           <------------CBF        --------->DAG2 ---AHL20(2)      --------->LBD16  --------->ICU4            <---------ANAC58 -->AHL20(2)     ----------->RAV1(2)--------->ATHB12         <---------ANAC46                       < --AHL20(1)<---------ARR11(3)      <---------YAB1            <---------ANAC58      <---------ARR14(2) ->AHL20(2)--------->ARR11(3)   --------->ICU4         <---------YAB1          --------->At4g35610  - --AHL20(2)<-----------ARR10<------ZmHOX2a(1)   <---------TOE2(3)  ---------->DOF2 --------->ARR14(2)   ttattttattcaaaatctcccctggattcaggagatgatgatttgaaattgacgatgatgtttgtgtgtaaaagtgatagaagcagaaatgggaaggggc  21188700                                                <---------HSFC1(1)                                                --------->HSFB2a(2)                                                --------->HSFC1(1)                                           <---------ANAC55(2)                                           <---------ANAC58                                           --------->ANAC55(2)                                           <---------ANAC58                                        --------->ARR14(2)                                      --------->At4g35610                                   <---------MYB52(1)                                   <------NtERF2<---------HSFB2a(2)                                  <---------RAP2.6(3)                <------ZmHOX2a(2) <-----------HVH21              <------ZmHOX2a(1)  --------->RAP2.3(3)                                          -------  ------>ZmHOX2a(2)              --------->RAP2.3(2)                                   <---------ANAC58  ===================HOX2a_HOX2a >>>>>>>>>AtERF-4                                      <---------ANAC58 ====================HOX2a_HOX2a >>>>>>>>>AtERF-3                                     --------->At4g35610 <------ZmHOX2a(2)              --------->RAP2.3(1)                                 <------ZmHOX2a(1) ---------ARR11(3)     --------->ZAT6 <---------At4g35610                  ---------->DOF2   <------- -------->ARR11(3)  <---------ATHB12<-----------RAV1(2)            <---------MYB46(3) --------->ZAT2   aagatcgcgattaagaggatcaataactctacgagccgtcaggttacgttctcgaagcgaaggaatggattgttgaagaaagctaaggagcttgcgattc  21188800                   <---------bZIP60(1)                   --------->bZIP60(1)              <------MYB46(1)              <------MYB83             --------->MYB111(1)             --------->MYB46(2)             <---------DEAR3(1)             <---------MYB46(3)             <---------AtMYB61             --------->MYB111(2)                                        <----------DOF2         <----         <---------TOE1(3)                <------MYB83           --------->LBD16            ---------         <---------AtMYB61                <------MYB46(1)       <-----------RAV1(2)       <-------GAMYB         <---------TOE2(3)              <--------P          <---------ZAT2               <---------MYB46(3)     <---------At4g35610               <---------MYB52(1)   <---------At4g35610<----------DOF2  <----     --------->At4g35610          <---------ALFIN1          --------->ZAT2  <-----------GT1<---------WOX13(1) -->GLK1(2) <--------P           --------->ZAT2             --------->At4g35610<--------------------- --GLK1(2)  <---------MYB55(1)   <---------ZAT2        <-----------GT1 <---------DAG2 <----------DOF2   tctgcgatgctgaggttggtgtcatcatcttctccagcaccggtaggctctacgatttctccagctccaggtaccttttttcttttctctttggttgact  21188900                                       <---------REM1(1)                                   <---------WOX13(1)                                 --------->ATHB12                               <---------WOX13(1)                             --------->ATHB12 ------DOF2                <---------WOX13(1)                                                       < >WRKY12                   <--------P <---------TOE2(3)                  <----------DOF2            < -----DAG2               <---------MYB46(3)                           <-----------GT1    <---------ANAC58 ---ANAC81             <---------WOX13(1)                      <---------AHL20(2)        <---------ANAC58   ttttttttgggtcttggtccatctaattggttgattgattgatgtagcaaattctaaatctcgatttttttttttctttcttaagtcgatttcttgttaa  21189000                                                 --------->YAB1                                                <---------YAB1                          <---------AHL20(1)                 <----------DOF2     <------ZmHOX2a(2)           <---------GLK1(1)  <---------YAB1 ---------ANAC58<---------ANAC58    <---------ARR11(3)    --------->HSFB2a(2)     --------->YAB1 ---------ANAC58<---------ANAC58    --------->ARR11(3)    <---------HSFB2a(2)   <---------WOX13(1)   ttgtttgcaaattcaattgctttagagaaggaatcgtagatcaacttagtctgataatttgcagaagaaatcacttggtttgaatgataatatgttttgt  21189100                                          <---------YAB1                                     <---------ICU4                                               ---                                     --------->ATHB12                                            <---                                    <---------YAB1                                  <---------YAB1<--                                    --------->ICU4 <---------ANAC58              <---------ANAC46<---                                  <---------At4g35610                         <---------AtMYB61  <---                           <-----------RAV1(1)     <---------ANAC46       <---------ANAC58       ----       <---------YAB1      <---------MYB46(3)      <---------ANAC58       <---------ANAC58       ----    ---------->TaMYB80  <-----------RAV1(1) --------->ARR11(3) <---------GLK1(2) ----------->GT1 <---   aaggggaatatgagagtgtgttctctgtgttgttggagatgattacgatatttgtgtggaacatagattgtgagggacttgtggtgtttattgaaacata  21189200  Previous    Next  AGI:  At3g57230.1    Description:  AGL16 (AGAMOUS-LIKE 16); transcription factor. similar to AGL21 (AGAMOUS-LIKE 21), transcription factor [Arabidopsis thaliana] (TAIR:AT4G37940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61572.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 21188689    to: 21191911    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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