Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ----------->GT1 --------->ATHB12                                           <---------AHL20(2) ---------AHL20(2)                                          --------->AHL20(2) -------->AHL20(2)                                    ----------->GT1 ---------AHL20(1)         <---------AHL20(2)        --------->DAG2                             <---- -------->AHL20(1)     --------->YAB1               ---------->DOF2                         <-------- --------ATHB12<---------ANAC55(2)             <---------------AGL15  --------->MYB52(1)    <--------   aattaattgggaacattaagtaaaatcatataatgaattcaattcattcaccaaaaaagtaataaaacagagtaagggcaatttagtagttttgctttat  21108000                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                    --------->DEAR3(1)                                                                                  ------>NtERF2                                                                                 <---------bZIP60(1)                                                                                 --------->ANAC58                                                       <------NtERF2             --------->bZIP60(1)                                                      ------>NtERF2              --------->ANAC58                                                     --------->ANAC58          <---------ATERF1(1)                                                     --------->ANAC46         ----------->HVH21                                                  --------->ANAC46            ----------->TGA1                                           <---------ARR11(3)                <-----------HVH21                   --------->ZAT14         --------->ARR11(3)               <---------MYB46(3)                  --------->ALFIN1   --------->At4g35610                    <---------DEAR3(2)     --------->TOE1(2)               --------->ZAT2  --------->ANAC58      <---------At1g77200     --------->TOE2(2)               <---------ZAT2--------->DEAR3(1)      <---------DEAR3(1)   ------->TEIL   <---------REM1(1)  <---------At4g35610                  <---------MYB52(1) -----YAB1     <-----------------------TaNAC69(2)<---------At5g28300----------->HVH21------>NtERF2 --DOF2     <------ZmHOX2a(1)      <-----------RAV1(2)----------->RAV1(1)<-----------HVH21         <- -DAG2 <-----------HVH21           ===============================RAV  --------->DEAR3(2) --------->MYB52(1)   gaatgaacctgtgaggagaagtgtaggcgaaatcgacccagccgagttcttcaccgcgccatttgagaatgcgaccgtcggtgacgccaacgtaagggcc  21108100                                                                                     <----------DOF2                                                                                 --------->ZAT18                                                                                 <---------ZAT18                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                             --------------->AtSPL8                                                                         --------->ALFIN1                                                                       <---------ANAC58           ---                                                                       <---------bZIP60(2)     <-----                                                  <---------AtMYB61    <---------ANAC58      <-------           ------>ZmHOX2a(2)                   <------ZmHOX2a(1)       <---------ANAC46 <---------AHL20(2)         <---------ARR14(2)          <---------LBD16                 <------ZmHOX2a(1) --------->AHL20(2) --------ALFIN1--------->ZAT6      ----------->HVH21        --------->ARR11(3)<---------ANAC58 ------   ttcaccttgtggatcgaactctaggctctctggtccatcgacgggaagaggaatggtcttagcatcttgaaggacgtgtttcgtgccctttaaattgtcc  21108200                                                                  <-----------HVH21                                                          ----------->HVH21                                                         <------NtERF2                                                        <---------MYB46(3)                                                       <---------ANAC46                                                      <---------ABI4(1)                                                      <------NtERF2<------NtERF2                                                    --------->ATERF1(1)                                                   <---------ABI4(1)                                                   --------->At4g35610                                                   <---------At4g35610                                                  --------->ARR14(2)                                  <---------DEAR3(1)--------->ALFIN1                                  <---------RAP2.6(2)<---------RAP2.3(1)                 ---------->DOF2 --------->RAP2.6(3)<---------DEAR3(1)       <---------WOX13(1)       =====================================HOX2a_HOX2a     --------->ATHB12           <------ZmHOX2a(1) <---------ARR14(2)    --------->GLK1(1)    <---------YAB1          ---------->DOF2     --------->LBD16   ------>NtERF2    <---------ATHB12     --------->ANAC58     <---------LBD16 <---------DEAR3(1)                 ---- ------------>ATHB5      --------->ANAC58    --------->MYB52(1)   <-----------TGA1               <--- --->NtERF2    <---------------AGL15        --------->MYB52(1)------>ZmHOX2a(2)------>NtERF2     ==== ----LBD16     --------------->AGL15     --------->YAB1<---------DEAR3(1)      --------->LBD16   <--- ----HVH21     ====================================================================================== --->SPL7     ----------------->AGL1    <---------TOE2(3)--------->At5g28300 <---------LBD16 <-------   ggcccgatgattgatgaccaaaagaagaagcaaaggacggctaagataaccggagcggcggtgatcggcgtcagaactctccggctaatcggcatctttc  21108300                 --------->ALFIN1                 <---------ANAC58               --------->ALFIN1                                         <----------DOF2 <----------DOF2 <---------ANAC58                                  <----------DOF2 ----------->AGL15                                              --------->ARR11(3) ------------AGL15                       ----------->GT1        <---------ARR11(3) ==================================================================================================== -------DOF2--------->DAG2             ---------->DOF2         --------->YAB1                 <------ ============MADS_MADS          <----------ID1                <---------ATHB12           --------->YAB1 ---DOF2   ---------->DOF2    <-----------GT1     --------->ALFIN1------>ZmHOX2a(2)     <---------ATHB12   tttctttggaagaaaaagtgtgtgtgaatatttaacaacaaaaaaggaaaatgtgtgtgaatcaatgatcttttctttgtgagtgaatcaatgatactga  21108400                                                            <---------ZAT18                                                            --------->ZAT14                                                            <---------ZAT14                                                            --------->ZAT18                                                           <---------ZAT6                                                    <----------DOF2                                               <----------DOF2                         <---------WOX13(1)                                              ------>ZmHOX2a(2)                       <------------CBF                                            <---------ARR11(3)                      <---------YAB1     ---------->DOF2                       --------->YAB1  ----------->GT1     ====================== ----------->GT1              *TSS        <---------ATHB12<---------------AtSPL8    <---------AHL20(2) =========MADS_MADS           <---------YAB1--------->ARR11(3)  ---------->DOF2<----------DOF2  <---- ---------AGL15        ---------->DOF2------------>CBF   <---------ANAC46--------->ALFIN1--------->ATHB12   aatgggttaaagactataaatagatgaaagttgtgagtgaatcaatgatcttttctttgtagtgtacaaagagatgtgaggcttttttaattgatttagg  21108500                                                              <<<<<<<<<WRKY18                                                            <-----------HVH21                                                        --------->ARR14(2)                                                        ------->TEIL                                                        --------->GLK1(2)                                                        <---------ARR11(1)                                                        <---------ARR14(2)                                                       <---------CCA1(2)                                                     <---------TGA1a                                                     --------->ANAC58                --------->O2                         --------->TGA1a                <---------TGA1a                      --------->O2                <---------O2                         <---------ANAC55(2)                --------->TGA1a                      --------->ANAC55(1)                --------->ANAC46        ----------------------->TaNAC69(2)                         <-       ----------->GT1           --------->MYB46(3)  --------->ANAC46--------->ARR11(3) <---------AHL20(1)  --------->ANAC46           <-----------HVH21       =======================bZIP_DOF    --------->ARR11(3)  --------->ANAC58     --------->ARR11(3)            =======================bZIP_DOF    <---------ARR11(3)  --------->ANAC58     <---------ARR11(3)            --------->ANAC58<---------ARR11(3) --------->AHL20(1) =========================bZIP_DOF<---------ALFIN1   --------->ANAC55(2)   ---------->DOF2        <-- --ZmHOX2a(1) <---------ALFIN1 <-----------GT1       <---------O2---------->DOF2  ----------->GT1 ---   acacaagaaacgttacacacgtcgatatctatgtcaccacctagttttatgtgccacgtatctgtcaaaaagattttaaaagcttggaaaaatattctaa  21108600                                             --------------->AtSPL8                                             <---------------AtSPL8                                         -------->HAHB4                                         <--------ATHB1                                         --------->ATHB12                                         --------->ATHB51                                         <---------ICU4                                        <---------ATHB51                                        <---------YAB1                                        --------->ICU4                                        <---------AHL20(2)                                  ----------->GT1                           --------------->AGL15                           --------->HSFB2a(2)                           <---------HSFB2a(2)                           <---------------AGL15                          <-----------------AG                          <-----------------AGL2                          ----------------->AGL3                          <-----------------AGL1                          ----------------->AG                          <---------YAB1           <--- -----ZmHOX2a(2)          <-----------------AGL3                    ------->TEIL         ---------->ID1 -------ARR11(3)          ----------------->AGL2              <------ZmHOX2a(1)     <----------DOF2 ------>ARR11(3)  <---------MYB52(1)    --------->AHL20(2)  --------->MYB59         ------>ZmHOX2a(1)   gatcaaatatttgggaagcagttgtttttctaaaaatggaaaataattgagtacaaaattgttaggaatgaatttttaatgctatccttttctcgttata  21108700                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                    <---------AHL20(1)                                                 --------->AHL20(1)                                                <---------ICU4                                                --------->AHL20(2)                                                <---------AHL20(2)                                                --------->ATHB51                                               <---------YAB1                                               --------->ICU4                                             <---------ICU4                                             --------->ATHB51                                             -------->HAHB4                       --------->YAB1                                             <--------ATHB1                      <---------TOE2(3)                                             --------->YAB1                      <---------YAB1                                             <--------HAHB4                     <-----------GT1                                            --------->AHL20(2)             --------->AHL20(2)                                            <---------ATHB51               <---------AHL20(2)                                        <---------YAB1                    --------->AHL20(2)                                        <---------AHL20(2)            --------->AHL20(2)                                       --------->TOE2(3)              <---------AHL20(1)                                     <---------AHL20(1)               --------->AHL20(1)                           <----------DOF2  <---------YAB1          <---------AHL20(1)                        <---------ARR11(3)  --------->ICU4          --------->AHL20(1)      ---------                        --------->ARR11(3)--------->YAB1            <---------ARR11(3) --------->ICU4   <---------ANAC46    <---------CCA1(2)--------->AHL20(2)          --------->ARR11(3) <---------YAB1 ------YAB1     <---------AHL20(2)   --------->AHL20(1) <-----------GT1  <---------AHL20(2) ---------   tcattgtttgtaatcgattttttttatatctttttaaaaaatattaataattattttatttctatttgaaaatattttaaattaacataatgaatagtaa  21108800                                           ---------->DOF2                                     ---------->DOF2 >YAB1                    <---------AHL20(2) --------->ANAC58      <---------AHL20(2) -->GT1                   --------->AHL20(2) --------->ANAC58 <---------YAB1                 <-------   tttgcaaaactagtatttagtcacaaaataaaatcgatataaagctaaagcaaaattgttttatatgattttattctttcgactacaaaatagagcttta  21108900  Previous    Next  AGI:  At3g57010.1    Description:  strictosidine synthase family protein. similar to strictosidine synthase family protein [Arabidopsis thaliana] (TAIR:AT3G57020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63060.1); contains InterPro domain Strictosidine synthase; (InterPro:IPR004141); contains InterPro domain Six-bladed beta-propeller, TolB-like (InterPro:IPR011042) Range:  from: 21106633    to: 21108430    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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