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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
---------->
DOF2
---------->
DOF2
----------->
GT1
<---------
LBD16
---------->
DOF2
<-----------
GT1
--------->
ANAC58
-------
DOF2
--------->
ANAC58
---
ARR11(3)
<---------
HSFB2a(2)
--------->
MYB52(1)
-->
ARR11(3)
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
----------->
GT1
<----------
DOF2
-----
tttgaaaccgtttcaggaatacttagcttctt
ctgcaagaaagtaaagaaaaagaaataagggttaactcggtgttcttctttagaattgtatagctgta
21095700
<---------
WOX13(1)
<-----------
GT1
----------->
HVH21
------>
ZmHOX2a(2)
--------->
MYB52(1)
--------->
At4g35610
<------
ZmHOX2a(2)
--------->
At4g35610
<---------
At4g35610
--------->
ARR11(3)
--------->
ZAT2
------->
TEIL
<---
---->
ZAT14
<---------
REM1(1)
<---------
ARR11(3)
--------->
GLK1(2)
---------
tagacgagcttattagaaacagatgtagatgacatatcagagtagctactagcgatcttac
cgattgatcagaagctggaagacatgaacggagagatga
21095800
<---------
MYB46(3)
<-----------
HVH21
<---------
GLK1(2)
<---------
DEAR3(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
LBD16
<---------
ANAC46
------->
GAMYB
--
--------->
ARR11(3)
<-------
TEIL
<---------
LBD16
-----
--------->
ALFIN1
<---------
DEAR3(1)
--------->
MYB52(1)
-----
---------->
DOF2
<---------
ANAC58
<---------
YAB1
--------->
MYB46(3)
--------
-------
ID1
------>
ZmHOX2a(2)
--------->
ZAT18
--------->
AtMYB61
--------
>
CCA1(2)
<---------
ARR11(3)
--------->
DOF5.7(2)
<---------
WRKY18(1)
<---------
CCA1(2)
-----
gaacaaagtgttgatcttcttgcgtcggtcacgttcactagcattgtgattaagcttcttgaccacaaccggattgttgtctatctcatttccttctgac
21095900
------
<--------
--------->
ARR14(2)
--------->
ANAC58
------>
NtERF2
<---------
ARR14(2)
<---------
YAB1
--------->
ANAC58
<---------
TOE2(3)
<---------
GLK1(2)
--------->
ICU4
<---------
MYB52(1)
<---------
TOE1(3)
---
------->
MYB52(1)
<---------
YAB1
<-----------
HVH21
<---------
MYB52(1)
-------
---->
ANAC46
<---------
At4g35610
----------->
GT1
<-------
GAMYB
---------
---->
ANAC58
<---------
YAB1
--------->
DEAR3(2)
<---------
RAP2.6(3)
<------
--->
TGA1
--------->
ANAC46
--------->
SPL7
<---------
ANAC46
--------->
ANAC46
--->
HVH21
--------->
ANAC58
<-----------
RAV1(1)
----------->
GT1
<---------
LBD16
---->
ANAC58
--------->
ANAC58
<-----------
HVH21
<---------
SPL7
--------->
ANAC46
--------->
MYB59
<----
gaaacagatactcccaagctattctgatgatgagtcacttcataagtctgtggtaccgtcaattcaagaaatgtgccgttatttaggttatctccggcac
21096000
------->
GAMYB
--------->
MYB46(3)
--------->
DEAR3(2)
------>
MYB83
--------->
RAP2.6(3)
<----------
DOF2
<---------
DOF5.7(2)
<---------
ANAC58
----------->
HVH21
<---------
ANAC58
--------->
WRKY38(1)
>
NtERF2
<---------
ANAC58
------>
MYB46(1)
-
ATERF1(1)
--------->
WRKY12
<------
ZmHOX2a(1)
------>
At5g28300
--------->
DOF5.7(2)
<---------
ATHB12
-->
DEAR3(1)
--------->
ATHB12
-------->
P
<---------------
AGL15
>
LBD16
<---------
ANAC46
------>
NtERF2
----------->
GT1
<---------
ANAC58
---
ALFIN1
--------->
ICU4
--------->
MYB52(1)
<---------
ANAC58
--
NtERF2
<---------
ANAC58
<---------
RAP2.6(2)
<---------
ZAT18
--------------->
AGL15
<-
cgtaatagctttcgtattgattcgttgacggccaaccgaagtttgtgaaaaatgaagggactaatgcacacat
tttttgcttaatcaaggacaaggttat
21096100
--------->
LBD16
------>
ZmHOX2a(1)
--------->
YAB1
<---------
LBD16
<---------
YAB1
--------->
CCA1(2)
<------
ZmHOX2a(1)
--------->
AHL20(2)
<------
MYB83
--------->
ICU4
<--
<------
MYB46(1)
<---------
YAB1
-----------
*
TSS
--------->
AHL20(2)
----------->
TBP
<-------
GAMYB
<---------
MYB52(1)
<--------
P
----------->
RAV1(2)
<----------
ID1
<---------
MYB46(3)
--------
GLK1(2)
<---------
AtMYB61
<---------
At4g35610
---------->
DOF2
<-----------
RAV1(1)
tgattctgtttttttcttgaagttgtttt
ggtaggaatattatagtctcctgattatatatgcggatgaaagactaaagaaacaaatctctgttgttaaa
21096200
--------->
MYB59
--------->
AHL20(2)
--------->
ANAC46
--------->
ICU4
<---------
ICU4
<---------
ZAT6
----------->
GT1
--------->
YAB1
>>>>>>>>>
ARR1
===========================
<---------
AHL20(2)
>>>>>>>>>
ARR2
--------------->
AGL15
------->
GAMYB
--------->
ATHB12
<---------------
AGL15
<---------
MYB52(2)
<---------
YAB1
----------------->
AGL3
----------
CBF
--------->
AHL20(2)
<---------
TOE2(3)
<-----------
GT1
---------->
DOF2
>
GT1
--------->
MYB46(3)
<---------
YAB1
--------->
AHL20(2)
----------------->
AGL2
tattgttcaacaaactatataataagtgtttttattcgttgagattatatgattgtgttatacgacttacatactataaagagaaatatttaggtctcta
21096300
<-----------
HVH21
--------->
ALFIN1
<-------
PIF4
<-------
MYC3
------->
PIF4
------->
MYC2
------->
MYC4
<-------
MYC4
------->
MYC3
<-------
MYC2
<-------
PIF5
------->
PIF5
--------->
TGA1a
<---------
TGA1a
--------->
ANAC55(2)
<---------
ANAC55(2)
<---------
O2
--------->
O2
------------>
OsbHLH66
<------------
OsbHLH66
<------
MYB46(1)
<------
MYB83
--------->
ANAC46
<---------
At4g35610
---
================
MYC_MYB
--------->
ANAC58
--------->
ZAT2
---
<--------
P
--------->
ANAC58
--------->
ANAC58
--------
=======================
bZIP_DOF
<---------
LBD16
--------->
ANAC58
------->
TEIL
tagggcataggttggcacgtgtcgaagcctatgttccacgcatgaactaggtttagtcacaagctcagcatattgtgtaagaatcaaacatgtatatgac
21096400
<----
<------
<---------
YAB1
<----------
DOF2
<---------
YAB1
<-----------
RAV1(2)
<---------
ANAC58
------>
ANAC58
<---------
ANAC58
------->
PIF5
<---------
At4g35610
------>
ANAC58
<---------
ANAC58
<-------
PIF5
--------->
ALFIN1
<---------
ANAC58
--->
HVH21
---------->
DOF2
<---------
ZAT2
--------->
At4g35610
<------
NtERF2
acgatagtaagattattgtttacacattgaaagatgactcatgcgagtgagaatgttgagagctcgtggtaatcaggtggaagatgctttgggcgtcttt
21096500
---
<----------
DOF2
--------->
ARR11(3)
<---------
ARR11(3)
---------->
ID1
<---------
AHL20(2)
<-----------
HVH21
<---------
ICU4
<---------
AHL20(1)
--------->
TOE2(1)
--------->
ANAC58
--------->
RVE1(1)
--------->
TOE1(1)
--------->
ANAC58
--------->
CCA1(1)
------>
ZmHOX2a(1)
--------->
YAB1
<-------
TEIL
<---------
AHL20(2)
-------
GT1
<-----------
RAV1(1)
<---------
ARR14(2)
--------->
AHL20(2)
-
----
DOF2
<---------
TOE2(3)
--------->
ARR14(2)
--------->
AHL20(1)
<
acttcctcgtcccatacattttttatgttgtaagcataaactagcattttcatgttgtaagcatatacataagcatttcaaaatttaatatctttatcta
21096600
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AGI:
At3g56970.1
Description:
BHLH038/ORG2 (OBP3-RESPONSIVE GENE 2); DNA binding / transcription factor. similar to BHLH039/ORG3 (OBP3-RESPONSIVE GENE 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G56980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63053.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64266.1); contains InterPro domain Achaete-scute transcription factor related (InterPro:IPR015660); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598)
Range:
from: 21095089
to: 21096129
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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