Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------MYB52(2)                                         <---------ATERF1(1)                       ------->GAMYB                                                 --------->ARR14(2)                      --------->ANAC58                                             --------->LBD16                      --------->ANAC58                                           <------NtERF2                    --------->MYB52(1)                                           <---------LBD16                    <---------DOF5.7(2)                                         ------>NtERF2                   <---------WRKY38(1)                                        --------->MYB46(3)                   <---------WRKY12                                           <---------ABI4(2) -----               --------->DAG2                                               --------->ANAC58   ------              ---------->DOF2             <---------ARR14(2)                --------->ANAC58 --------         <---------------AGL15            --------->ARR14(2)           <---------At4g35610   --------    --------->AHL20(2)--------->ANAC46 <---------------------WRI1      --------->At4g35610   <------- --------->WOX13(1)<---------WRKY45  <---------ANAC46                  ----------->RAV1(2)   <------- ->GT1   --------------->AGL15    ----------->HVH21                ------->TEIL --------->MYB52(1) --   tttcaattaaaccaaaaaaagtcaacgaaacaaacctcgacggggattcgaacgaagacggagaagatgaaactgctgaagccaccggagactccagcag  21090400                                                                                                  <--                                                                                               ------                                                                                              ------>ZmHOX2a(2)                                    <---------ANAC58                                          =======       <---------WRKY45             <---------ANAC58                                         <------ZmHOX2a(2)      --------->WRKY18(1)           <---------ANAC46                                         ========     <--------ZAP1                 <------NtERF2                                            ---------     <-----------HVH21      <----------DOF2      <------MYB46(1)                            <--------     --------->At5g28300   <----------DOF2       <------MYB83                             --------->HSFB2a(1) ---->At4g35610          <------NtERF2          <---------DEAR3(1)                      --------->MYB52(1) --->RAP2.6(2)           ------>NtERF2<---------MYB46(3)                               --------->TOE1(2) ->At4g35610            --------->ANAC58        --------->MYB46(2)                     ------->GAMYB- ->ZAT2<---------WRKY12 --------->ANAC58    <---------TOE1(3)                         <---------MYB52(2) --ZAT2<---------WRKY38(1) <---------DAG2   <---------TOE2(3)        <---------YAB1 --------->MYB52(1) --At4g35610<------ZmHOX2a(1) <---------AtMYB61<--------P          <---------At4g35610--------->MYB46(3) -------->DOF2    ---------->DOF2<---------RAP2.6(2)        ------->TEIL            <---------DOF5.7(2)   ccaaagcggtcaaaggattataaagcccgcctttggtggcttgttgaaggtaggcgaagatgaacatggagatgatagagaagagataacgaacgatctc  21090500              --------->LBD16              ----------->GT1         <---------DEAR3(2)        ------>ZmHOX2a(2)      <---------ARR14(2)      --------->ARR14(2)     <------ZmHOX2a(1)    --------->HSFB2a(1)    <---------HSFC1(2)                                      ------>ZmHOX2a(1)    --------->HSFC1(2)                                    ----------->RAV1(2)    <---------HSFB2a(1)                                <---------GLK1(1) -------LBD16<---------RAP2.6(2)                       --------->GLK1(1) ----->HVH21<---------LBD16                           <---------ARR14(2) ===========HOX2a_HOX2a                               --------->ARR14(2)                     -------- ===========HOX2a_HOX2a                         <---------WRKY18(1)<---------ARR14(2)      --------->ZAT14 >ARR11(3)  --------->SPL7  --------->GLK1(1)  --------->WRKY38(1) --------->ARR14(2)      <------ZmHOX2a(2) -ARR11(3)<-----------HVH21<---------ARR11(3)  --------->WRKY12   <---------CCA1(2)       <---------ARR11(3) -------->LBD16            --------->ARR11(3)  --------->WRKY45   --------->GLK1(1)       --------->ARR14(2)   accggaaggatcggtccggctaaatccaagaactccatggactaaaatgttgaccagaactcctgcccatatccacatgaacgacaataccagatcagtc  21090600                                                                                        =============                                                                                        =============                                                                                        ------>ZmHOX2a(2)                      <-----------GT1                                                  --------->At4g35610              ---------->ID1                                                   <----------DOF2            <---------ANAC58                                                <---------ANAC58        <            <---------ANAC58                                        ---------->DOF2   <---------ARR11(3)         <---------ARR14(2)                                       <---------AHL20(2)  --------->ARR11(3)         --------->ARR14(2)                                       --------->AHL20(2)<---------YAB1<--         <---------GLK1(2)           --------->YAB1       ---------->DOF2   <---------ANAC58      --- ->WOX13(1)<-------TEIL          <---------ATHB12     ---------->DOF2     <---------DOF5.7(2)   <----   actactaaaccgattcgtcccatttttcgattccaacgatgagaaccaatttctcagaaagaaagaaattaaaagttagcgtttttatgatctgaattta  21090700                                                     ----------->GT1                                                     --------->At4g35610                                                     <------MYB46(1)        <------ZmHOX2a(1)                            <------MYB83 --------->ATHB12                                   --------->MYB55(2) ==============HOX2a_HOX2a                          <---------MYB46(3) ====HOX2a_HOX2a                     <---------WOX13(1)      <-----------GT1 ---------YAB1                     --------->ATHB12<---------MYB55(1)  <---------WOX13(1) ----ZmHOX2a(1)                   <---------YAB1   <---------ANAC46 <---------AHL20(2) ------>YAB1<-------GAMYB     --------->AHL20(2)<---------RAP2.6(2) <---------YAB1 -----TOE2(3)         --------->GLK1(2)        <---------At4g35610  --------->AHL20(2)   ggataattgaggaccgttgaagagaatcgagattatatgattggctctaagcggctggtgaatttagcatataattgacgctagagacattgtttgagtc  21090800                                        --------->ICU4                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                      <---------bZIP60(1)                                      --------->bZIP60(1)                                 <---------ANAC46                                 <---------ANAC58                                 <---------ANAC58           ------------>CBF    <---------ANAC58          *TSS  ---------->DOF2<---------ANAC58         <---------ETT(1)     <---------AtMYB61    --------->ZAT2          <----------DOF2                  <-----------------AGL1       -----------    <---------ZAT2<---------TOE2(3)--------->ALFIN1    --------->GLK1(2)                <-----------GT1    --------->At4g35610    <---------ANAC58           <---------GLK1(2)                 <<<<<<<<<GT-1    <---------At4g35610    <---------ANAC58     <---------YAB1              --------->ZAT2--------->MYB46(3)   tgagtcagcttccgacaataaaggttttggctttggtgtgtcgtgatgagattatagattctcttcgattttggaacgagcttcggctattaaccaatag  21090900                                                                    --------->AHL20(2)                                                          <---------ICU4                                                          <--------HAHB4                                                          -------->HAHB4                                                          <--------ATHB1                                                          --------->ATHB51                        ================================MADS_MADS   <---------AHL20(2)                        <---------------AGL15             --------->YAB1                    <---------YAB1                       <---------ATHB51                 <---------MYB52(1)                      --------->AHL20(2)                --------->TOE2(3)          <---------REM1(2)        <---------AHL20(1)               --------->ANAC58         <----------DOF2  <---------YAB1               --------->ANAC58         ===================================================MADS_MADS               ----------->GT1--------->DAG2             --------->ICU4           <-----------GT1               <---------ANAC55(2)      <---------------AGL15       --------->AHL20(1)               --------->ANAC55(2)   <-----------GT1     <---------ATHB12  --------------->AGL15              <-------TEIL   ---------->DOF2      --------->ZAT14  <---------AHL20(2)    <---------MYB52(2)  --------------->AGL15    <---------MYB52(1)--------->AHL20(2) ->CBF---------->DOF2<-----------GT1 <---------AHL20(2)--------->YAB1      <---------------AGL15   acatcaactaaagtgatacgttattactggataaagtatttactttacacagttaactaataattacaaataaattactacaattagccttcttaagaat  21091000                                     --------->HSFC1(2)                             <----------DOF2                                     <---------HSFC1(2)                     --------->ANAC58                                     --------->HSFB2a(1)                    --------->ANAC46                                --------->ANAC58                      <----------DOF2                                --------->ANAC58                     ------>ZmHOX2a(2)                               <---------LBD16                <----------DOF2      <---------ANAC58                             ----------->HVH21   <------ZmHOX2a(1)   <---------ICU4<---------ANAC58                          --------->TOE1(2)      ===========================HOX2a_HOX2a                          --------->TOE2(2)     ----------->GT1    --------->ARR11(3)            <---                         ----------->RAV1(2)  <-----------RAV1(2)  <---------ARR11(3)    <-------GAMYB                    --------->YAB1   <---------HSFB2a(1)     <---------DAG2 --------->ANAC58  <------       ---------->DOF2 <-----------GT1 <-----------GT1    <-----------GT1<---------REM1(2) ----------   tgtttacaaaaaagccctccaattttaacctgcgacggaagtttcccctcaggaaaaatatgaccttttgatctttacacgcttggctttgggttgtaac  21091100                                                                                               <-----                                                          <----------DOF2          ----------->GT1                                                     <----------DOF2               --------->LBD16                                                    <---------HSFB2a(1)           --------->ANAC58                                                    ------>ZmHOX2a(2)             --------->ANAC58                                                    --------->HSFB2a(1)           --------->ANAC46                                                  --------->ARR14(2)             <---------LBD16                                                  --------->ARR11(3)            --------->CCA1(2)  ---------->ID1                                  <---------AGP1               --------->ARR14(2) -------DOF2                                      <---------ARR11(3)           <---------ARR14(2) -----GT1                                         ------->TEIL               ---------->TaMYB80<----- ->GT1                  <---------MYB46(3)        <---------ARR14(2)    ----------->GT1        <-----   ttttgtctctcttctatcgtttatggtgtttgaagcttcagcattgggaatggatctttccttttgaaaataagttgtgaatatacggaaaaatgtgact  21091200         --------->ANAC58         --------->ANAC58    --------->ETT(2) --------->MYB52(2)  ---------->DOF2 ----ANAC58     <---------ANAC58                                             <---------YAB1   ------>ZmHOX2a(2) ----ANAC58     <---------ANAC46                                          <---------YAB1    <-------- ----ANAC46     <---------ANAC58                             <---------MYB52(1)             ---------   tgttagtggagaagcaatgcgtttaaagtgttcgacagaatgcctcagtgagttagagtttcagttacctctgtttttgattatagctcttagtgatctc  21091300  Previous    Next  AGI:  At3g56950.1    Description:  SIP2;1 (SMALL AND BASIC INTRINSIC PROTEIN 2); transporter. Identical to Probable aquaporin SIP2-1 (SIP2-1) [Arabidopsis Thaliana] (GB:Q9M1K3); similar to SIP1,2 (SMALL AND BASIC INTRINSIC PROTEIN1B) [Arabidopsis thaliana] (TAIR:AT5G18290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18284.1); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 21089340    to: 21090810    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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