Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------AHL20(2)                        <---------AHL20(1)           --------->ANAC58           --------->ANAC46           --------->ANAC58     <------ZmHOX2a(1)          --------->LBD16--------->AHL20(2)    <---------AHL20(2)  <---------AHL20(2)                                                         <-   --------->YAB1       --------->AHL20(2) <----------DOF2                                    <------  <---------YAB1     <---------AHL20(2)  ---------->ID1                        --------->CCA1(2)  --- --------AHL20(2)    --------->AHL20(2)  <-----------------AGL1             <---------YAB1    <------ ------->AHL20(2)   --------->AHL20(2)  <-----------GT1         --------->At4g35610       <---------ZAT18   ttttattatatccacgaaaattttaaattatttaggagtttttttcttttttggacaacttatatgagatgagaagcgatgatacacatttggccacttt  20860600                                                                 <---------AHL20(1)                                                                 --------->AHL20(2)       --------->CCA1(2)                  --------->ATHB12------->TEIL   --------->HSFB2a(2)           <---------ZAT14          --------->PCF2   <---------HSFB2a(2)           <---------ZAT18    <---------SPL7 --------ANAC46                  --------->ZAT18<---------ZAT6   <---------AHL20(2) ---DAG2<-------TEIL    --------->GLK1(1) --------->YAB1  <---------TCP20 ------->ID1            <---------GLK1(1)<-------TEIL   <---------SPL7                     <--------- ----DOF2       <---------ANAC46 --------->ZAT14<-----------RAV1(1)          <---------AHL20(2)   ttcgtctagatacattcttcgtgaagaaatccaagtgcacacattcattagtgttggacggacccattttattttggatttttttgtataattctttggg  20860700                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                         <---------WOX13(1)                               <---------YAB1                                        >>>>>>>>>ARR1                                    <---------AHL20(2)                                        >>>>>>>>>ARR2                                --------->YAB1                                       --------->ATHB12                              -------->ATHB1                                      <---------YAB1                                 <---------ICU4               <-----------GT1        --------->ICU4                                --------->AHL20(1)           <--------ATHB1           <---------ICU4                                  --------->ICU4           <---------ICU4           --------->YAB1                    ------>ZmHOX2a(1)<---------YAB1           -------->HAHB4          --------->ICU4            --------->At5g28300    --------->AHL20(2)          --------->ICU4           <---------YAB1         --------->At4g35610       <---------YAB1          <---------ATHB51      <---------YAB1            <---------At4g35610 <XXXXXXXXXXXXXXXXXXXXMIR417 -DOF2  --------->YAB1      --------->YAB1       --------->YAB1   <-----------GT1   <---------AHL20(2)   gtttttttgttaataattcacttctgtctataatatgattatgattgttcatcatattttagctgtaatttcctctcttgaacaaaattattattttcgt  20860800                        --------->ATHB12                       <------ZmHOX2a(2)                      --------->ARR11(3)                  ---------->DOF2             --------->ATHB12                --------->ANAC58   ------>ZmHOX2a(2)                --------->ANAC58  --------->bZIP60(1)             ----------->TGA1     <---------At4g35610           --------->ANAC55(2)    --------->At4g35610           <---------ANAC55(2)    <---------bZIP60(1)                                       ---------      <---------------AtSPL3     <---------ARR11(3)                                 <---------YAB1 ---ANAC58 <---------ANAC58  <------MYB83    --------->ICU4                        <---------ARR11(3) ---ANAC46 <---------ANAC58  <------MYB46(1) <---------YAB1    >>>>>>>GRF7 ----------->GT1 <--------- -->ANAC55(2)----------->HVH21   --------->ARR11(3)           <-----------RAV1(2)  --------->ARR11(3) ---ANAC58<-------TEIL<---------ARR11(3)----------->HVH21   <-----------HVH21     --------->YAB1   gatgtttttaagtacgtgacgaaagatcatttggtgatctcactgacatgatttgcccagcctgtcaggtttacctatggtcaaatatcattttctcgat  20860900                     <---------CCA1(2)                    --------->ARR14(2)                    <---------ARR14(2)              --------->ANAC58              --------->ANAC58            <---------WRKY38(1)            <---------WRKY12       ---------->DOF2          <-----------HVH21    --------->YAB1    <---------ALFIN1<-----------ARR10  ----------->GT1  ----------------->AGL1     --------->ARR14(2)        ---------->ID1       ----------->TBP <-----------------AGL1      <---------ARR14(2)     <---------DAG2------->GAMYB            ------>ZmHOX2a(1) ----------------->AGL1   ------------>CBF          <----------DOF2 --------->ALFIN1   --------->ARR14(2) >HSFB2a(2)--------->WRKY18(1)<---------ATHB12    ------->TEIL <-----------GT1         <---------ARR14(2) --GT1--------->MYB52(1) --------->ANAC46        <-----------GT1<---------At5g28300   <---------ARR14(2)   tttgccccaaacggtcaaggcatatatccccaatcttcaaagggtatttatgtacttttcgctattaaccgtgtggctatatgaagccgattcctcataa  20861000                             <------NtERF2                            ------>NtERF2                            --------->LBD16                           --------->RAP2.3(3)       <-------GAMYB                           --------->RAP2.3(2)      <---------DEAR3(2)                           --------->RAP2.6(2)      --------->MYB55(2)                           --------->RRTF1(2)       <---------MYB46(3)                           --------->DREB2C(2)     <---------DEAR3(1)                           --------->ATERF1(2)     <---------ANAC46                           --------->DEAR3(1)     <---------------------WRI1                          --------->RAP2.3(1)    --------->LBD16                          <------NtERF2 --------->ANAC55(2)                          --------->ATERF1(1)    ------>NtERF2                          --------->ERF1<---------ANAC58                          --------->RAP2.6(3)    ------------>AtMYB77                         --------->LBD16<---------ANAC58                                            -                         ------>NtERF2 <---------TOE1(2)                                            -                         <---------ATERF1(1)    <---------DEAR3(1)   ----------->RAV1(1)        -----                        --------->ANAC46<---------ANAC55(2)       --------->bZIP60(1)           -----               --------->HSFC1(2)      <---------TOE2(2)----------->GT1                     ---------               <---------HSFC1(2)<---------GLK1(2)<---------MYB52(1) --------->AtMYB61      <--------        *TSS---------->DOF2<---------ATERF1(2) <---------LBD16    <---------bZIP60(1)<---------CCA1(2)       ---------->DOF2 <---------LBD16<-----------GT1--------->At5g28300   <------ZmHOX2a(2)---------   caactacaaaaaaggaaagcttcttcccgccggcaaattcttacgtttctccggcggttagaaaaatgacaccacagatcaaaactcatctcttgccgaa  20861100                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                    --------->YAB1<--    --------->HSFC1(2)                                                         <---------RAP2.6(3)---    --------->HSFB2a(1)                                                       --------->RAP2.6(2)<---    <---------HSFB2a(1)                                                      <------NtERF2     <-----    <---------HSFC1(2)                  ------>NtERF2                        <---------LBD16   <-----   ------->TEIL                         --------->LBD16                      --------->ATERF1(1)<----  <---------ARR11(3)                   --------->ANAC46         ----------->GT1--------->LBD16 <----- -------->ANAC58                      <---------LBD16      <---------WRKY12 ------>NtERF2      <----- -------->ANAC58                    ------->GAMYB      ------->MYC3 <---------YAB1 --------->ICU4---- ---->ANAC58                        --------->AtMYB61  >>>>>>>>>>ABI5       <---------ATERF1(1)------ ---->ANAC58                       --------->MYB46(3)  >>>>>>>>>>BZIP12    <---------ARR14(2) <------ >HSFB2a(2)                       ------->TEIL         <-------MYC3<---------KAN4(2)<---------ICU4--- -HSFB2a(2)                       -------->P<------NtERF2<-----------HVH21 --------->ARR14(2) ------- -------->AGL1              <------ZmHOX2a(2)         --------->O2--------->YAB1<------NtERF2------>NtERF2   gcaagaaccttcttcgtctgagaaccatggatcatcaacctccggcatcgttttcaacgtgtcaacgagtataatcggagccggaataatgtcgatgccg  20861200       <---------TOE2(3)      ---------->DOF2 <---------ANAC46 ------NtERF2 --------ATERF1(1) --------RRTF1(1) --------ERF1 --------RAP2.3(1) --------ORA47(2) --------DEAR4(2) ---->NtERF2 -------RAP2.3(3) -------RAP2.3(2) ------ABI4(1) ----->ATERF1(1) -----ORA47(2) ---->LBD16 -----RRTF1(1) -----RAP2.3(1) -----ATERF1(1) ->NtERF2 ----DEAR3(1) ----RAP2.3(2) ----RRTF1(3) ----RAP2.3(3) -------DEAR3(1) ------>DEAR3(1) ---NtERF2 ----RAP2.6(2) ----DREB2C(2)                                            <----------DOF2 -----ERF1--------->ARR11(3)                             <---------ANAC58          --------->At4g35610 ----ATERF1(2)                                 --------->YAB1                      <---------At4g35610 ----RRTF1(2)                                 <------ZmHOX2a(2)               --------->GLK1(1) ----->RAP2.3(1)                              <---------YAB1                  <---------GLK1(1) --->ATERF1(2)                               <---------ARR11(3)         <-------GAMYB ---LBD16 <---------ARR11(3)             --------->YAB1  <---------ANAC58<---------MYB52(1) ------>ATERF1(2)                     <---------ICU4<---------ANAC58   <---------ANAC58 -->ATERF1(1)                     <---------YAB1    <---------ANAC58   <---------ANAC58             <   gcggcgtttaaagttcttggaatagttccagcgtttttgattatcacgatcatagcttggctttccacaatttccgttggatttctgatgaaatcaactc  20861300                                                         ------>ZmHOX2a(2)                                                         <-------TEIL                                                       <---------ARR14(2)                                                       --------->ARR14(2)                      <-----                                                       <---------ARR11(3)                  <---------DAG2                                            <------MYB83<------ZmHOX2a(2)               <------------                                            <------MYB46(1)                             -------------                                           --------->MYB59                             <-------------                                ---------->DOF2       <------ZmHOX2a(1)                <-------------       --------->GLK1(2)      <---------YAB1----------->GT1             <---------WOX13(1) <---------   <------NtERF2        <------NtERF2      --------->MYB46(2)    <---------SPL7     <--------P<------  --------->LBD16      --------->LBD16     <---------MYB46(3)    --------->ZAT14   <-------GAMYB<---- --------->DEAR3(1)  <---------LBD16      <---------MYB55(1)     <---------ZAT14  <---------MYB46(3) ---------LBD16    --------->ANAC46      <---------MYB52(1)     <----------DOF2   --------->MYB55(2)   tcgccggagaatcaactacttacgccggagttatgaaagagtcgtttggtaaaacaggatccatcgctgtacagattgctacgatggttgctacttttgg  20861400       <---------AHL20(2)       --------->AHL20(1)       <---------AHL20(1)     <---------YAB1   --------->YAB1  <---------YAB1              ----------->GT1 ----MYB46(3)                --------->DAG2 ---AGL15            --------->YAB1 -->AGL15           <---------YAB1                     --------->REM1(2)                    <-------- ----AGL3         <--------HAHB4                       --------->ZAT14         --------->At4g35610 ----AGL2         --------->YAB1                       <---------ZAT14         <---------At4g35610 -DOF2--------->AHL20(2)    ---------->DOF2   --------->YAB1       <---------At4g35610     <---------GLK1(2) ---AtMYB61       <---------ICU4             <---------ATHB12      --------->At4g35610     <---------ARR14(2) ---GAMYB        --------->ICU4          ------>ZmHOX2a(2)         <---------ZAT2          --------->ARR14(2)   ttgtatgattatattttcgattattataggtaaagtaatttgatctaatcatctaagtgtagaggtctcagctactatttgagcttaagaacagattggc  20861500  Previous    Next  AGI:  At3g56200.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT2G40420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41461.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 20861008    to: 20863006    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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