Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ------------>AtMYB77                  --------->MYB52(1)                <---------MYB52(1)                                                             ------                --------->DOF5.7(2)                                                        --------->ARR14(2)               <-------GAMYB ----------->ARR10                                             <---------ARR14(2)               --------->TOE1(3)             ------>NtERF2                            --------->ARR14(1)        --------------->AtSPL8 <---------GLK1(2)                                     --------->ARR11(1)        <---------------AtSPL8 <---------ARR14(2)                                    --------->ARR14(2)        <---------------AtSPL3 --------->ARR14(2)                                    <---------ARR14(2)    <------ZmHOX2a(1)      --------->LBD16   --------->MYB52(1)                      <---------GLK1(2)  <---------TOE2(3)       <---------ANAC46  --------->DEAR3(1)                    <--------P <-------  <---------TOE1(3)  <---------MYB46(3)     ----------->HVH21            ---------->ID1<-------TEIL --------AHL20(2) <---------DOF5.7(2)       --------->ANAC46 ----------->GT1   <---------AtMYB61   ttttaaggaatttgtaccgttaacggttgcgcagatttgtttatccccgacggagagagtctcgagtaaaacgttgtcgttttggtagattcgtttccgg  20767000                                                                                <---------RAP2.3(1)                                                                                <---------MYB46(3)                                                                                ------>NtERF2                                                                                <---------ERF1                                                                               <---------ATERF1(2)                                                           <---------ZAT14     <---------ANAC46                                                           --------->LBD16     <---------DEAR3(1)                                                      <---------ARR14(2)       --------->ATERF1(2)                                                      --------->ARR14(2)      --------->ATERF1(1)                                                   <---------ANAC58          <---------ATERF1(1)                                                   <---------ANAC46          --------->LBD16                                                   <---------ANAC58          ------>NtERF2         <---------ANAC58                      --------->LBD16               <---------RAP2.3(1)         <---------ANAC58----------->RAV1(1) <---------LBD16                <---------DEAR3(1)      -        --------->HSFC1(2)                  --------->MYB52(1)         --------->ARR11(3)           <        --------->At4g35610               --------->MYB46(3)     <------ZmHOX2a(1)      <---------TOE2(3) --->LBD16               --------->MYB52(1)------->GAMYB --------->ANAC46  <---------LBD16<------ZmHOX2a(1) --LBD16<---------HSFC1(2)  ------->GAMYB <---------MYB55(2)  --------->At4g35610<------NtERF2      -   tttggagagtagcttccgatgttatcccaacagagaaggctgtaaccaccggagcgtataccgcagaggaaattatctccggcggctattgaggagaatg  20767100                                                                 --------->WRKY45                                                                 --------->WRKY38(1)                                          --------->MYB52(1)     --------->WRKY12                                       <---------bZIP60(1)     <---------ANAC58                    <-                                       --------->bZIP60(1)     <-------GAMYB                      <--                                       <---------ANAC46        <---------ANAC58                 <----     <------NtERF2                     <---------ANAC58   <---------ANAC46                      -----    ------>NtERF2                   --------->ALFIN1      <---------ANAC58                     ------    --------->LBD16               <---------ANAC55(2)     --------->ALFIN1 <------ZmHOX2a(2)   <-----   <---------ANAC46               <---------ANAC58        <---------ANAC58<---------ARR11(3) --------   --------->DEAR3(1)             --------->ANAC55(2)     <-----------RAV1(1)       --------->DEAR3(1)   <---------LBD16                =====================================MYC_MYB    --------->LBD16----  <---------LBD16                 --------->O2      <-------TEIL ----------->HVH21--------->At4g35610  --------->ATERF1(1)             <---------O2     --------->CCA1(2)      --------->ARR11(3)<------NtERF2  <------NtERF2----------->TGA1   <---------ANAC58<---------ARR14(2)  --------->LBD16      <--------- ------>NtERF2 ----------->HVH21  <---------ANAC46--------->ARR14(2)<---------LBD16 ----------->HVH21 -------->ANAC58                  --------->TGA1a<------ZmHOX2a(1)<---------WRKY18(1)  <---------DEAR3(1) ---------DEAR3(1)<---------ANAC46<---------TGA1a=================================HOX2a_HOX2a<------- -------->ANAC58  <---------bZIP60(2)  <---------ANAC58<---------MYB52(1)--------->GLK1(1)--------->ALFIN1   agacgccggggtttagagtgacgttgatattaagacgcgtgtcgtaacagaggatacgttgtgtgggttgaccggagatcaatgcgcagacggtgtcgga  20767200                                                                                               ------     --------->ANAC46                        <----------ARF1                                  <------  --------->ARR14(2)                     --------->O2                              ----------->HVH21  <---------ARR14(2)                     --------->TGA1a                           ----------->TGA1 --------ANAC46                          <---------O2                           <---------ANAC46----- ----NtERF2                              <---------ANAC46                       <---------DEAR3(1) -----ARR14(2)                           ====================================MYC_MYB  <---------ANAC46 ---->ARR14(2)                        ----------->TGA1                     <---------MYB46(3)-------- --->ATERF1(1)                        ----------->HVH21                   <---------AtMYB61  -------- -NtERF2              ----------->RAV1(2)<---------TGA1a             ------->GAMYB<-----------HVH21 < ->ETT(1)      --------->MYB52(2)     --------->ALFIN1            --------->MYB52(1)  <---------ANAC55(2) -->NtERF2 <---------ANAC58         --------->At4g35610        --------->YAB1----------->HVH21<------ --HVH21   <---------ANAC58       <------ZmHOX2a(1)   <------ZmHOX2a(1)<---------DEAR3(1)    -------- --ANAC46  <---------ANAC46------->TEIL--------->MYB52(1)     <---------YAB1 ----------->TGA1--------   gccgtatacgactgcgtaagttgagcctgaacctaaggaggtgacgggagacaagaggaagaagatgataacggcgatggtgacggtgacggaaaacgtc  20767300       ----------->GT1     <---------At4g35610    <---------ANAC46                                                                 --------->HSFB2a(2) ----->HVH21                                                                         <---------HSFB2a(2) -----HVH21                                                                <------MYB46(1) ---->MYB52(1)                                           <------NtERF2     <------MYB83 ->bZIP60(2)                                  <---------ANAC58             <---------MYB46(3) ->ANAC58                                     <---------ANAC58            <---------AtMYB61 -------GAMYB                                 <---------ANAC46            *TSS<-------TEIL -----TGA1                             --------->WRKY12<---------DEAR3(1)<---------WOX13(1) ->ANAC46   <-----------GT1   <---------MYB46(3)<------NtERF2           <---------ARR14(2)      ----- ->ANAC58XXXXXXXXXXXXXXXXXXXX>MIR162A/B--------->WRKY38(1)              --------->ARR14(2) ----------   acggttgagttgataaacctcttcatctacagaggttgaagttgactggcgtcttcgtcgtcgattctaagtcggattggttcattttcagaactcaata  20767400                                                                     <----------ID1                                                               --------->ATHB12                                                      --------->MYB52(2)      ----------->GT1      <-                                    ---------->DOF2   <---------ANAC58    --------->ANAC58         --                                 >>>>>>>>>TBF1        <---------ANAC58    --------->ANAC58     ------ ---->YAB1         --------->MYB52(1)                <-------TEIL<---------YAB1--------->At5g28300 -- -->CBF  <---------ZAT6       >>>>>>>>>TBF1>>>>>>>>>TBF1      --------->AHL20(2)    --------->YAB1<--   acaagactcttgtgttagaagtaacgagagaagaagaagaaagaagaagaagacgttcgtgagatttattagagacaagacagtaattagaaattagtca  20767500                                                                         <-----------GT1                                                                      <---------AHL20(2)                                                                      <---------ICU4                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)               <---------ANAC58                                   <---------AHL20(2)           --------->CCA1(2)                                      --------->AHL20(2)    <---------ANAC58                                          --------->AHL20(2)    <---------ANAC58                                          <---------AHL20(2) --------ARR14(2)                                            <---------AHL20(2)                 ----- ------->ARR14(2)                                            --------->AHL20(2)            --------->TOE2(3) --->YAB1  <---------GLK1(1)         --------->ANAC55(2)    <---------WOX13(1) --------->TOE2(3)<---- ------->GLK1(2)          <---------YAB1         <----------DOF2 <---------AHL20(2)  --------->TOE2(3) -------GLK1(2)<---------ANAC58      <---------ANAC55(2) <---------YAB1 <---------YAB1    -----------   gaatttgcttaagaaatgcgtttttaatatgttagagtcacgtttttttgtctttgattttgatttatttatttattacagcattaatctaaatgttaaa  20767600                                                                                                   <-                                                                                               <-----                                                                                            ---------                                                                                            <--------                                                                                            <--------                --------->ATHB51                                                          <---------ARR11(3)                --------->ATHB12            <---------ARR14(2)                            --------->ARR11(3)                --------->AHL20(2)          --------->GLK1(2)                     <---------AHL20(2)                <---------ICU4              --------->ARR11(3)                    <---------AHL20(1)                <---------AHL20(2)          --------->ARR14(2)                    --------->AHL20(2)  --------->HSFB2a(2)                       <---------ARR11(3)              ----------->GT1--------->CCA1(2)  <---------HSFB2a(2)                       <---------ARR11(1)      ----------->GT1     <---------TOE2(3) ---->ARR11(3) <---------YAB1    ----------->GT1         --------->YAB1   <---------WOX13(1)--------- -----ARR11(3) --------->ICU4  --------->DAG2        --------->AHL20(2) --------->ATHB12<---------YAB1 >GT1     ----------->GT1     ---------->DOF2  <----------DOF2      <---------ZAT6--------->AHL20(1)   tcttctaaaacagagtaattatttgaatttcaaaaaggaaattcagtatctttatgtaaatataacaagagtgttaattggtaattaattaagatatatt  20767700                                    --------->GLK1(2)                                   <---------ARR14(2)                                   <---------ARR11(3) --------->ANAC55(2)               --------->ARR11(3) ----------GT1            <---------DAG2 ----AHL20(2)          <---------ALFIN1                                                    --------->AtMYB61 >ARR11(3)            --------->MYB46(3) ---------->DOF2     --------->ATHB12             --------->ANAC46 -ARR11(3)          <-----------GT1<---------GLK1(2)         <---------AHL20(2)         --------->ANAC46 -AHL20(1)     <----------DOF2     --------->ARR14(2)        --------->ATHB51     --------->AHL20(2) >AHL20(1)  <-----------GT1<----------DOF2                   --------->AHL20(2)   <---------AHL20(2)   tttacataacaaattttctttactaccaccttttaaagattctcaaagaaaatttgatatgaattatttgggccgtttcaatatttaaatacaccacaac  20767800                                                          ------->GAMYB                                                       --------->MYB55(1)                                                       ------->GAMYB                                                      <---------MYB111(2)                                                      <---------MYB52(2)                                      --------->AHL20(2) --------->MYB46(3)                                      <---------AHL20(2)-------->P                     --------->YAB1                               ----------->GT1        --------->MYB46(3)               --------->AHL20(2)                              --------->ALFIN1        <---------MYB55(2)        <---------ANAC46                         <---------AHL20(2)      --------->ANAC58               ----------->GT1                     --------->AHL20(2)          --------->ANAC58               <---------ZAT6                     <---------AHL20(2)          --------->AtLEC2        ---------->DOF2    ---------   tactacgttgtatatgtgtgtatataaataatgtggtgatttatattagtcatgcaacaaccgctcatatgctaagaaagtagtgtgaataatataaaga  20767900  Previous    Next  AGI:  At3g55950.1    Description:  protein kinase family protein. similar to protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G47850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41369.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21446.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Regulator of chromosome condensation/beta-lactamase-inhibitor protein II (InterPro:IPR009091) Range:  from: 20764670    to: 20767374    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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