Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              ------>ZmHOX2a(1)                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                         --------->GLK1(1)                                                                                         <---------GLK1(1)                                                                                        <---------ARR11(3)      --------->At5g28300                                  --------->DAG2               --------->ARR11(3)     ----------->GT1                                      ---------->DOF2               <---------ARR14(2)    ----------->GT1                                   --------->ANAC46                  --------->ARR14(2) ------AHL20(2)                                       --------->ANAC58         <---------AHL20(2) ----->AHL20(1)                                       --------->ANAC58        --------->AHL20(2) ----->AHL20(2)                                      --------------->AGL15    <---------AHL20(2) >AHL20(2) ---------->DOF2                           ================================================   aaaatgagggtaaaaaagacttaattgtttttgaaaaacatatttgactaatctacaagaaaaaggaatagatggacaaatttttttgtagatatccttt  20670100               <---------DAG2               <----------DOF2       <-----------GT1  --------->AHL20(2)  <---------AHL20(2)                               --------->ARR11(3) --------->AHL20(2)<---------YAB1                  <---------ARR11(3)                          <----- ----DOF2   <---------ALFIN1         --------------->AGL15              ----------->HVH21      <----- ====================================================MADS_MADS<---------GLK1(2)       <---------MYB52(1)   agatttaatttcccctactttatatttgaagtttgcatactctatatatgaagtatctcttatagatgctctaagtgaccctcaaacccttattttgaag  20670200                                      ------>ZmHOX2a(2)                                    --------->ARR11(3)                                <---------At4g35610                  <---------ARR11(3)                         <-----------RAV1(1)                         --------->ARR11(3)    ------>NtERF2        <---------MYB46(3)                    ----------->GT1    <---------AHL20(2)   <---------ALFIN1    <-------GAMYB<---------ARR11(3)        --------->DAG2     --------->YAB1------ ----TOE2(3)          --------->MYB52(2)  <------------MYB.PH3(2)   <---------CCA1(2)    <-----------GT1 ----TOE1(3)          <---------MYB46(3)  --------->MYB46(3) ---------->DOF2     --------->AHL20(2) -   gtttgccacctcttaaaatgagggtcgttgttggagatgatctaacaaactattgtttaaaaaaaaagttatatcttatctaataaaaatgttaccatca  20670300             --------->AHL20(2)          --------->AHL20(2)     --------->AHL20(2)    <---------WOX13(1)    <---------TOE1(2)                                             <------------ --------->AHL20(2)    <---------ANAC46                                   --------->ANAC46 <---------AHL20(2)    <---------ANAC58                                   --------->ANAC58         <- --------->AHL20(1)    <---------ANAC58                      ----------->GT1         <----------DOF2 --->YAB1 <---------AHL20(2)                      <----------DOF2--------->AHL20(2)------>ZmHOX2a(1) -------->AHL20(2)    <-------TEIL    --------->ZAT14 <----------DOF2     --------->ANAC58  <--------   aaattaattgaataaaataatacattcgtgtgttcaaatgtgtagtcgtttcctttctttgaagcgtttatatatcacacaagtcctctttgttttaatt  20670400                                                                                                  ---                                                                                           --------->LBD16                                                                                      <---------ANAC58                                                                                      <---------ANAC58                       --------->ANAC58                                              --------->HSFC1(2)      <---------ARR11(3)        <---------TOE2(3)                                    <---------HSFC1(2)      --------->ARR11(3)        <---------TOE1(3)                                    <---------HSFB2a(1) ------------ANAC81    --------->ANAC46       -------->P                             --------->HSFB2a(1) ---------DOF2         --------->ANAC58   --------->ZAT6                          <---------GLK1(1) - -AHL20(2)         <---------ANAC55(2)  <-----------GT1   ----------->HVH21       <---------At4g35610   tctttgaagttcttatatatcacataagcaaattaaggtttctaactctaccagttgtttctgactggttttccaatttcatggagatgcttccgagttt  20670500                                                                              <-------MYC3                                                                              ------->MYC3                                                                             <---------O2                                                                             --------->TGA1a                                                                             --------->O2                                                                        ===============MYC_MYB                                                                        ------->GAMYB                                                                       --------->MYB46(3)                                                                      -------->P                       --------->MYB52(1)                             =================MYC_MYB                       ------>MYB83                                  ------->GAMYB                       ------>MYB46(1)                               ==================MYC_MYB                      --------->MYB55(1)                            --------->MYB46(3)                     <---------MYB55(2)                             <---------MYB111(1)                     --------->MYB46(3)                             <---------MYB55(2)                    --------->ANAC58                                <---------ALFIN1                    --------->ANAC46                     --------->DEAR3(2)  <---------TGA1a             --------->YAB1                      --------->AHL20(2) <---------MYB111(2)        --------->ANAC58                         --------->YAB1     <---------MYB52(2)         ------        --------->ANAC46                      --------->YAB1   --------->ANAC58              <-------        --------->ANAC58                     <---------AHL20(2)--------->ANAC46         ------>ZmHOX2a(1) ------->ID1 <---------ICU4 ------->TEIL    --------->AHL20(2) --------->ANAC58     <---------ARR14(2) ----------->CBF    --------->ANAC58  --------->GLK1(2)--------->MYB52(1)  <---------ALFIN1  --------   gtctcaatccaagaaacatgacacccaacgtatcatccaaattctatataataaaaaaaaccgacaggcaacaacccccacgtttgaatcctgtagagtg  20670600                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                             <-------                                                                                            <-------GAMYB                                                                                           --------->MYB55(2)                                                                                           --------->ATHB12  ------------>CBF  ------------>CBF                                            ---------->DOF2<----- ----->HVH21 <-----------GT1     --------->ARR14(2)                 <----------DOF2        <---------MYB46(3) --ZAT6--------->YAB1    --------->YAB1 <-----------TBP          <---------AHL20(2)       <---------YAB1 --->GT1 ------>ZmHOX2a(1)       <---------ARR14(2)        <----------DOF2------->TEIL <---------YAB1   acatttcaatcctattttcaactccaatagaaatcgatacgcttatatatgtttacttagtctttattttcttttgcaccttcaaagttttgatggttgg  20670700        <---------ANAC58        <---------ANAC58          --------->ANAC58 -MYB46(1)                        --------->ANAC58 -MYB83 <---------ANAC46          --------->ANAC46 --->MYB52(2)         <---------ANAC58    --------->ARR14(2)                           <---------MYB46(3) ---AtMYB61           <---------ANAC58    <---------ARR14(2)                  <---------AGP1       <- -P   <---------YAB1 --------------->AtSPL8   <---------At4g35610         --------->ZAT14       ----- ----MYB46(3)    <---------MYB46(3)  <---------ANAC46                     <---------ZAT14    <-------   tttctattttgcttgtgagtagttgagtactatatcacgccgtgtttctgctatcttgctctctcatttatgtctctgtagttctgtagttgttagtgat  20670800                         --------->YAB1                         --------->TOE2(3)                        ----------->GT1                       <---------TOE2(3)                                            --------->AHL20(2)                  <---------AHL20(2)                    <---------MYB52(1)  --------->WRKY38(1)                  --------->AHL20(2)                 <------------MYB.PH3(1)--------->WRKY12 <---------ARR14(2)   --------->YAB1                <---------At5g28300   <-------GAMYB          ---- --------->ARR14(2)--------->YAB1                  <-----------GT1       <---------ANAC46        ---- --------YAB1 <---------AHL20(2)         --------->AHL20(2)       <---------YAB1 --------->YAB1  ---- ------>TGA1 --------->AHL20(2)          <---------AHL20(2)   <---------ANAC58   --------->TOE2(3) --ZAT6    --------->AHL20(2)           --------->AHL20(2)    <---------ANAC58   --------->TOE1(3)   gacgattcaccaatataaaatttataatgttaatcttacaaattaaaatgtgttaaccgtttttgcttaaaattgccgttgaaccataaattatagaaca  20670900                                                                                          <---------YAB1                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                        <---------ICU4                                                                                        --------->ATHB51                                                                                       --------->ICU4                                                                                     --------->YAB1                                                                                    --------->AHL20(2)                                   --------->ANAC58                                 <---------AHL20(2)                                   <---------ANAC55(2)                              <---------YAB1                                   --------->ANAC58                            <-------TEIL                       <---------------AGL15                               --------->ARR11(3)   --------->ARR11(3)  <----------DOF2                                     --------->AHL20(1)   <---------ARR11(3)  --------------->AGL15                            <<<<<<<<<RAP2.2<---------YAB1 ----->ANAC58       <---------ARR11(3)                     <---------DAG2  <---------ARR11(3)      <- ----->ANAC46       --------->ARR11(3)                 <---------WRKY38(1)--------->CCA1(2) --------- ----->ANAC58       <---------AHL20(1)                --------->WRKY18(1)--------->ARR11(3) <--------   agcaagatttagttgattacaatatctttttttagataagtaagtctatatgtttagtcaacctttcttcgtttagatatattcatataattatttttat  20671000  Previous    Next  AGI:  At3g55670.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G52680.1); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G52680.2); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 20668992    to: 20670482    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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