Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------MYB52(1)                     <---------At4g35610                  <-------TEIL <---------AHL20(2)                 --------->ARR14(2)                 <---------ARR14(2)                             ---------->DOF2     --------->WRKY18(1)               <---------MYB46(3)                            --------->YAB1      ------>ZmHOX2a(2) <---------MYB52(1)<-----------RAV1(2)                --------->ANAC58         --------->ARR14(2) -------GAMYB<---------At4g35610                --------->AHL20(2)             <---------ARR14(2) ----->HVH21 --------->At4g35610     ------>ZmHOX2a(1)--------->ANAC58        <------ZmHOX2a(1)   <-- ----AtSPL8---------->CDC5 --------->AHL20(2)   <---------AHL20(2)      <---------AHL20(2)        ---   accgttacattgctcagcggttcagccgtttatttattcctctaacatttttaaataagctatttataaagaaatttataggatcgggcaaggagacttc  20655500                                                             --------->ZAT14                   ------                                                             <---------ZAT14                   ======                                                      --------->ANAC46                        =======                                                     <---------TOE1(3)                        <------ZmHOX2a(2)                                                    --------->MYB52(1)                       <-------                                                    <---------DOF5.7(2)                      <-------                                               <---------TOE1(3)--------->ANAC58             --------              <---------ARR11(3)               <---------TOE2(3)--------->ANAC58--------->ANAC46              --------->ARR11(3)     --------->AtLEC2<---------TOE2(3)          --------->ANAC58 -------At4g35610                <---------ZAT18  --------->DOF5.7(2)   --------->LBD16      -------- ------>At4g35610                --------->ZAT18<---------ZAT6  --------->ANAC46--------->ANAC58-----   tgctaaaatcgtcgaagatgttgaagaatttttagtgccatacaaatttagggttaacgaaactacactcaatccgaaaaacaagctatagaaccgatct  20655600          >>>>>>>>>>AtWER       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->GLK1(1)      <---------GLK1(1)     --------->ARR14(2)                                                    <---------AHL20(2)     --------->ARR11(3)                                                <---------DAG2     <---------ARR11(3)                                                <----------DOF2     --------->ARR14(3)                                          --------->YAB1     <---------ARR14(2)                                          <---------ICU4    <------ZmHOX2a(1)                                           --------->ICU4 <---------ICU4 >ZmHOX2a(2)                                                    <---------AHL20(2) ==========HOX2a_HOX2a                                          <---------ATHB51 ==========HOX2a_HOX2a                                          --------->AHL20(2) --ARR14(2)                                                    --------->AHL20(2) --ARR11(3)                                                    <---------AHL20(1) ->ARR14(2)                                                   --------->YAB1<-----------GT1 ->ARR11(3)                                          --------->YAB1 <---------AHL20(2)              - ---------------->WRI1   --------->AHL20(2)         <---------YAB1  <-----------GT1              <<<<   tagaaaggatctccaactgttttcagattaaaaaacaaaaatgtctctaactatatcatagccaaaataattactttttaatctttccatatttcatatt  20655700                                                                   <---------AHL20(2)                                                                   --------->AHL20(2)                                                                  --------->AHL20(2)                                       <---------YAB1           --------->YAB1                                  ------->TEIL                 <---------AHL20(2) <---------AHL20(2)                               --------->AtLEC2            --------->ICU4         <---------YAB1                            <-------TEIL                <---------ARR11(3)       --------->AHL20(2)                        --------->ARR11(3)            --------->ANAC58  --------->DAG2 -------->TOE2(3)       <---------ARR11(3)            --------->ANAC58 ---------->DOF2     ---------- <<<<<<GT-3b            --------->AHL20(1)<---------WOX13(1)  --------->AHL20(2)--------->CCA1(2)   -   tttcttaaaaacaaaaacaaaacatatatattcatgcacatatgatagataatatcaagaaatttttaataaataaagtcagatataatagatgtgacaa  20655800                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              =======                                                                                              =======                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                       <---------ARR11(3)                                                               <---------YAB1          --------->ARR11(3)                                                             --------->YAB1            <---------ARR14(2)                                                           <-------GAMYB               <---------ARR11(1)              <------ZmHOX2a(2)                            ==========================================     ---------->DOF2                    ----------->TBP   ----------->GT1              --------->ARR14(2)  --------->TOE2(3)       ---------->DOF2              ============================================== ->HVH21     <-----------HVH21        --------->YAB1   ------------>AtMYB77            <-----------ARR10 -------->GLK1(2)        <---------WRKY45             ----------->HVH21    *TSS       <---------CCA1(2)   ataatctaaaagaccgatcacatgtagtcaaagttttcaactataaatatgcagagatgacagttataagagtcgcacaaaaaactgcaaatcttcacgt  20655900     <----------DOF2 ->MYC2 --MYC2 ->MYC3                                                              --------->RAP2.6(3) --MYC3                                                           <----------DOF2 -->TGA1a                                                       --------------->AGL15 ===============bZIP_DOF                                        <---------------AGL15 ===============bZIP_DOF                                       <-----------------AGL1 ---TGA1a                                                      <-----------------AGL2 ---O2                                                      ------>ZmHOX2a(1) -->O2                                                      <----------DOF2 ---ANAC58                                                <---------ICU4                      <------ ---ANAC55(2)                                           <-----------GT1                      <------- -->ANAC55(2)                                          <-----------GT1                     ---------- ---ANAC58                                            <---------AHL20(2)               <----------DOF2 ===MYC_MYB                   <----------DOF2        <---------AHL20(2)              <------NtERF2 ===MYC_MYB        <---------TOE1(2)<-----------GT1  --------->AHL20(2)        --------->STY1(1)  ---   gtcttctcttttgtttcatcacatgttctctcctttcttcacctctctctacaaatttaatcctttctcttttcggcatccctaggcccctttggccttt  20656000                                                             <---------AtLEC2                                                        <----------DOF2                       -------                                                  <---------ALFIN1                            <------ ----DOF2                                        ------>MYB83<---------ANAC46    --------->ANAC58 --- --DAG2                                        --------->AtMYB61                 --------->ANAC58 <-- >ID1<-------TEIL      --------->DAG2          <---------MYB111(1)   --------->ANAC58    <---------GLK1(2) ------>TOE2(3)       ---------->DOF2<-------TEIL------>MYB46(1)     --------->ANAC58---------->DOF2<   tcttaaatacatctctcagaaacaaaaagtttgtatacatacatttccacctacacatctttggcatggacaagaacaagaacaagaaaaagattgtttc  20656100             ------>ZmHOX2a(1)                                              >>>>>>>>>>>>>>>>>LFY  --------->REM1(1)                   <---------AHL20(2)                    <<<<<<<<<<<<<<<<<LFY -->ARR14(2) ===========================HOX2a_HOX2a                        --------->ANAC46 -----GT1 ---------->ID1          --------->YAB1                         --------->At4g35610 ------>At4g35610       <-----------TGA1                        ---------->ID1        ----------->GT1 -------At4g35610   <----------DOF2  <---------AHL20(1)      xxxxxxxxxxxxxxxx>smallRNA(i) ----------DOF2 <---------CCA1(2)<------ZmHOX2a(2) <---------GLK1(2)     <---------At4g35610   cgcttcatcttcgtcctcatctctttcgtcattcgatcatatatttgggccaagagtctcttcttcgtcttcttcatcggccactggattgttcaaatcc  20656200                      <-----------HVH21                     --------->ANAC58                     --------->ANAC55(2)                    --------->YAB1                     --------->ANAC58                       <---------ICU4                     --------->ANAC46                       --------->ATHB12                  <---------SPL7                            -------->ATHB1                --------------->AtSPL3                     <---------YAB1               --------->ZAT14                             <---------ATHB12               <---------ZAT14                             --------->ICU4         ------>MYB46(1)                               <---------MYB52(1)         ------>MYB83<---------ANAC55(2)              --------->TOE1(3)       <---------MYB111(2)                            --------->TOE2(3)       <---------ALFIN1--------->TGA2(2)             <---------ANAC55(2)       --------->AtMYB61         --------->ARR11(3)  ----------->GT1       --------->DEAR3(1)        <---------ARR11(3) <-------TEIL                       <-------TEIL      <---------MYB55(2)  --------->At4g35610     <---------ARR14(2)              <---------ANAC55(2)      --------->MYB46(3)  <---------At4g35610     --------->ARR14(2)       <---------AtLEC2         <    --------->ANAC46--------->SPL7          <-----------RAV1(1)        --------->At4g35610   <-------   atcttcccaccaccctctgcagtacgtcatctcaagatttcaacatttgtgggatacgttaatcattgtaaacatctgcatgttacatatacatggtgtt  20656300                                --------->AHL20(2)                                <---------AHL20(2)<---------AHL20(2)                              --------->AHL20(2)  --------->AHL20(2)                              <---------AHL20(2)--------->AHL20(2)                          <---------AHL20(2)    <---------AHL20(2)                          --------->AHL20(2)--------->AHL20(2)<---------AHL20(2)                        --------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)                        <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)                      --------->AHL20(2)  <---------AHL20(2)<---------AHL20(2)                      <---------AHL20(2)--------->AHL20(2)--------->AHL20(2)                  --------->AHL20(2)    <---------AHL20(2)<---------AHL20(2)                --------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)               <---------AHL20(1) --------->AHL20(2)--------->AHL20(2)               --------->AHL20(1) <---------AHL20(2)<---------AHL20(2)         <---------ANAC55(2)<---------AHL20(2)<---------AHL20(2)  <---------GLK1(1) --------->AHL20(2)<---------AHL20(2)<---------AHL20(2)  --------->GLK1(1) <---------AHL20(2)--------->AHL20(2)--------->AHL20(2) ------ZmHOX2a(1) <---------AHL20(2)--------->AHL20(2)<---------AHL20(2)                          --- --ANAC46--------->ANAC55(2)--------->AHL20(2)--------->AHL20(2)   <-----------GT1            <------   taggagctcttacttaatatatatatatatatatatatatatatatatatatatatatatatatatatataacaattaagttgaactactctctaacttt  20656400  Previous    Next  AGI:  At3g55646.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G39855.2) Range:  from: 20655875    to: 20657634    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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