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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                               <----
                                                                                               -----
      ---------->DOF2   --------->ARR11(3)                      ------->TEIL          ----------->GT1
---------->HVH21        <---------ARR11(3)                   ----------->GT1     ------->GAMYB -----
-------At4g35610   <---------MYB52(2)                    --------->AHL20(2)     --------->MYB46(3)
-----GT1         --------->ZAT6                -------->P<---------AHL20(2)     <---------MYB52(2)--
 
cactgaccaaaatgcaatttccactaacatcttgtttagtctctcactcttaccccctaaaaaaatgtatatatcagttatcaactaacatgtaaaattg  20631000
                           <---------AHL20(2)
                           --------->AHL20(2)
                         <---------AHL20(2)
                         --------->AHL20(2)
                       --------->AHL20(2)
                       <---------AHL20(2)
                     <---------AHL20(2)
                     --------->AHL20(2)
                   --------->AHL20(2)
      <-------TEIL <---------AHL20(2)        ---------->DOF2
--------->ZAT14  <---------AHL20(2)       --------->AHL20(2)                 <---------DAG2
<---------ZAT14  --------->AHL20(2)       --------->YAB1                     <----------DOF2
<---------ZAT18--------->AHL20(2)   ----------->GT1                      <---------ATHB12
-----ZAT14   <---------AHL20(2)     <---------ANAC55(2)         --------->MYB52(1)<---------ANAC58
---->ZAT14   --------->AHL20(2)<---------AHL20(2)     <---------TOE2(3)--------->WOX13(1)
---->ZAT18 --------->AHL20(2) --------->AHL20(2) --------->ARR11(3) <------ZmHOX2a(1)
------->ANAC46 <---------AHL20(2)   --------->ANAC55(2)         ---------->DOF2   <---------ANAC58
 
cactgcacatacatatatatatatatatatatatataatatgtaataaaaaagaactagggtttaagtaaaggacaatcacttttgggttcgaagtcgat  20631100
                                               --------->AtMYB61
                                              --------->ANAC58                             <--------
                                              --------->ANAC46                      ------>ZmHOX2a(2)
                                              --------->ANAC58 ------>MYB83        <---------GLK1(1)
                                              --------->bZIP60(2)                  --------->GLK1(1)
                                              --------->At4g35610                  <------ZmHOX2a(2)
                                              <---------At4g35610 --------->ANAC46<---------ARR14(3)
              >>>>>>>GRF7                ----------->HVH21     ------>MYB46(1)    --------->ARR11(3)
             <-----------RAV1(2)        <---------WOX13(1)   --------->TOE1(2)    <---------ARR11(3)
            <---------MYB52(1)        --------->ATHB12 --------->YAB1        <------ZmHOX2a(2)   <--
           <-----------HVH21         --------->ICU4   <---------YAB1       --------->GLK1(1) -------
 
tacatcatccagactgtcaggtttcttctcaccataagcagtgattgacacctcaccatgataacctacaaatcacagagatcgagatctctgggcatgg  20631200
             --------->HSFB2a(2)
             <---------HSFB2a(2)
            ----------->GT1
           <------ZmHOX2a(2)
          <---------ARR14(2)
    <---------LBD16
-AtLEC2   --------->ARR11(3)                                <-----------GT1         ---------->DOF2
-------MYB46(3)      ----------->GT1               <---------YAB1 ---------->DOF2  <---------AHL20(2)
-->ALFIN1--------->GLK1(1)                         <---------ATHB12       --------->At5g28300
 
tggtttcgacggagatcgagaaaacagaaaattagatttagaagtaagaggcctatcaatgttttacatttaagcacagtaaacatttaaagcccagcct  20631300
                                             <---------YAB1
                                           <---------AHL20(2)
                                           <---------ICU4
                                           -------->ATHB1
                                           -------->HAHB4
                                           <--------HAHB4
                                           --------->ATHB51
                                           --------->YAB1
                                          --------->ICU4
                                          <---------ATHB51
                                          <---------YAB1                                   ------->GAMYB
                                     <-------GAMYB                                 ------------>CBF
                                    <---------MYB46(3)                           --------->ANAC58
                                    ----------->GT1                              --------->ANAC58
                                  <-------GAMYB                                ---------->DOF2  <---
                                  <---------MYB52(1)                          --------->AtMYB61 ----
                                --------->MYB59     --------->MYB52(1) --------->ANAC58 --------->MYB52(1)
           >>>>>>>>>GT-1     <---------ARR14(2)   --------->MYB46(3)   --------->ANAC58<---------ATHB12
        ----------->GT1      --------->ARR14(2) <-----------GT1        --------->ANAC46--------->MYB46(3)
 
agcccattaagaggtaaatctaatttgctacgaattcggttgttaattattaaaccatcggtttagttcatcaaacgcaaaccaaagccaataaccgaat  20631400
                    <----------DOF2
              --------->YAB1                  <---------DEAR3(1)   <------MYB83
              <---------ICU4       <---------AHL20(2)          ------->GAMYB
             --------->ICU4      <---------RVE1(1)        <<<<<<<GRF7--------->ALFIN1 <---------ARR14(2)
         --------->AHL20(2)      <---------CCA1(1)      ------>ZmHOX2a(1)            <------NtERF2
    <---------HSFB2a(2)         --------->ARR11(3)    ----------->RAV1(2)           --------->LBD16
    --------->HSFB2a(2)         <---------GLK1(2)<---------GLK1(2) <------MYB46(1)<---------LBD16
  <---------HSFB2a(2)  <---------LBD16       --------->RAP2.6(3)  <---------AtMYB61<---------ANAC46
  --------->HSFB2a(2)*TSS       <---------ARR11(3)    <---------At4g35610    --------->DAG2
------ICU4 --------->YAB1--------->LBD16 <-----------GT1----------->HVH21   ---------->DOF2
----->ATHB51--------->AHL20(1)----------->ARR10------>NtERF2--------->MYB52(1)  --------->ALFIN1   <
 
aatttctcgagaaaaaataatgactttccggtgaagatttttttttacgacggcttctcctgacaacggaaggtgttgagaaagtggcggaatttgattt  20631500
                                               --------->GLK1(1)
                                               <---------RVE1(1)
                                              <---------GLK1(2)
                                              --------->ARR11(3)
                                              <---------ARR11(3)
                                              <---------ARR14(2)
                                              --------->ARR14(2)
                                         <------ZmHOX2a(2)
                                         --------->CCA1(2)
                                        --------->ARR11(3)
                                        --------->ARR14(2)
                                        --------->AGP1
                                        <---------ARR14(2)
             ------>ZmHOX2a(1)         --------->GLK1(1)
             <---------CCA1(2)    <---------ANAC58                                              <---
             ===================================HOX2a_HOX2a                                  <------
        ------>ZmHOX2a(1)         <---------ANAC58                                        <---------GLK1(1)
   ------>ZmHOX2a(1)              <---------ANAC46 <---------AHL20(2)                   --------->ATHB12
-----------GT1           <---------ARR11(3) --------->LBD16         ----------->GT1   <---------WOX13(1)
 
tgtttcctctcctctcctatctaaacaaggtctgttttcgtgagatccagatattcaatttggattcaaaatcgtgaattgggttttggattgatttctg  20631600
                                                                                 <------ZmHOX2a(2)
                                                          --------->ATHB12      <---------ARR11(3) <
                                                         <---------YAB1         --------->ARR11(3)<-
                  ------>ZmHOX2a(2)                      --------->ICU4        --------->GLK1(1)  <-
            <----------DOF2                            --------->YAB1    --------->MYB52(1)      ---
        <---------ZAT18                            <-----------GT1  --------->ANAC58      --------->LBD16
------MYB52(1)   --------->At4g35610            --------->ARR14(2)  --------->ANAC58     <---------ANAC46
-----------AGL2  <---------At4g35610       <-----------HVH21     <---------KAN4(2)      <---------LBD16
 
ttactggtctgtgtgctttgatctgaatgttgtttcattctctagttgtcagatttactgatgatgggaataagcaaaacggagatcaatttgcggagat  20631700
                 --------->ANAC58
             --------->MYB52(1)
             ------>MYB83
             ------>MYB46(1)
            --------->MYB55(1)
           --------->AtMYB61
           <---------MYB111(2)
           <---------MYB46(2)
           <---------MYB52(2)
           <---------MYB111(1)
           <---------MYB59
          <---------At4g35610
          --------->ANAC46
          --------->ANAC58
          --------->ANAC58
         ------->TEIL
        <---------ALFIN1
       --------->ZAT14                       ------->TEIL
       <---------ZAT14                       <-------TEIL
    --------->LBD16                      ------->TEIL        <---------YAB1
    --------->At4g35610                  <---------------AtSPL8
    <---------At4g35610                  <---------------AtSPL3  --------->AHL20(2)          <------
----------DOF2   --------->ANAC58       <---------AtLEC2   ------>ZmHOX2a(2)                <-------
--------ANAC58 --------->MYB46(3)     <---------YAB1     --------->ARR11(3)          <---------ANAC46
--------ANAC58-------->P         --------->HSFC1(2)      <---------ARR11(3)          <---------ANAC58
-------------------->TaNAC69(2)  <---------HSFC1(2) <----------DOF2                  <---------ANAC58
 
tgctttccgctgcacctaaccagcaaaatcagtcgaagcttatgcatgtacgtttcttttgatcttcattatatgtaaactattagtctcgtgtttatgt  20631800
                              --------------->AGL15
                        <-----------RAV1(1)
                  --------->ZAT14
                  <---------ZAT14
                  --------->At4g35610
              --------->GLK1(2)                                                         <---------TOE1(2)
              --------->ARR11(3)                                                        <---------TOE2(2)
              <---------ARR11(3)                                           ----------->HVH21
              --------->ARR14(2)                                         <---------LBD16--------->LBD16
-----RAV1(1)  <---------ARR14(2)               --------->YAB1            ----------->RAV1(2)     <--
--TOE2(3)    --------->RVE1(1)<---------------AGL15          --------->LBD16           <-----------RAV1(2)
 
tgatgtatgaaacaaaaaatctgcagtatgttgctacattgagggaacaattagaacaactctccgaagaaaaaacccctgaaggccttcccaggtttac  20631900
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AGI:  At3g55600.1   
Description:  similar to cation exchanger, putative (CAX10) [Arabidopsis thaliana] (TAIR:AT1G54110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43197.1); contains domain PD119426 (PD119426)
Range:  from: 20631422    to: 20633449    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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