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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                               <----
                                                                                          --------->ARR14(2)
                                                                                          <---------ARR14(2)
                                                                                          --------->ARR11(3)
                                                                                          <---------ARR11(3)
                                                                                   <----------DOF2
                                                                             <---------ZAT2<--------
                                                              <----------DOF2<---------At4g35610
                                                 --------->HSFB2a(2)     <---------HSFB2a(2)   -----
                                                 <---------HSFB2a(2)     --------->HSFB2a(2)  ------
    --------->ANAC46                  <---------AtMYB61      <---------DAG2  --------->ZAT2<--------
---->GT1                             <---------TOE1(2)   <---------RAP2.6(2) --------->At4g35610
 
ttaaaacccacaatgagcgagtaaaccaagtcttctctcgtatggtcgaggtcgagaattgcgacctttttttgttctcgagcagcctttgcagatattt  20574800
                                                                        --------->YAB1
                                                                       --------->ICU4
      <-----------HVH21                                              <---------ICU4
   ---------->DOF2                                                   --------->YAB1
  <------ZmHOX2a(1)                                                 --------->ICU4
--------->MYB59                                                --------->ANAC58
-----AHL20(2)                                                  --------->ANAC58
-RVE1(1)                                                --------->HSFC1(1)          <---------ANAC58
---->AHL20(2)     <---------ICU4                        --------->HSFB2a(2)         <---------ANAC58
--->AHL20(2)      <---------GLK1(2)                     <---------HSFB2a(2)    --------->ATHB12
-CCA1(1) --------->MYB59                 ---------->DOF2<---------HSFC1(1)    <---------AHL20(2)   -
 
aattaggaaagtcaggtctaagaatttctgagaagaagagaataaaaagactcattcatctagaagaagccataatgatgttttattgggtctgttttga  20574900
                               <---------ANAC46
                              <-------TEIL
                           <---------ANAC58
                           <---------ANAC58
                      --------->ATHB12                                         xxxxxxxxxxxxxxxxxxxxx
                     <---------AHL20(2)                     <----------DOF2 --------->MYB52(1)
                     --------->AHL20(2)       --------->ANAC46   ------>ZmHOX2a(1)
                     <---------YAB1           --------->ANAC58  --------->TOE1(3)                <--
--------->DOF2    <----------DOF2             --------->ANAC58  --------->TOE2(3)      ----------->GT1
 
tcaaaagtccaaagacttctacttttaattgggttcgtatacatttttcaagcagccaagagtctttccttaaactaagtaagggtaagatggtcatttt  20575000
                                                        <------MYB46(1)
                                                -------->HAHB4
                                                <---------ICU4
                                                --------->YAB1
                                          --------->ANAC55(2)
                                          <---------ANAC58
                                          <---------ANAC55(2)
                                          <---------ANAC55(1)
                                          <---------ANAC46
                                          --------->ANAC58
                                          --------->ANAC58
                                          <---------ANAC58    <<<<<<<<<<MYB80
                                          --------->ANAC55(1)<------MYB46(1)
     <---------WRKY18(1)               <---------MYB52(1)   <---------AtMYB61
    --------->WRKY38(1)               <-----------HVH21 <------MYB83                      <---------TOE1(2)
    --------->WRKY45               ----------->RAV1(2) --------->MYB59                    <---------TOE2(2)
    --------->WRKY12              ------>NtERF2<---------ATHB51                          <----------
 --------->MYB52(2)           <-----------GT1  --------->ICU4<------MYB83           --------->O2<---
x>smallRNA(le3)         <---------TOE2(3) ----------->GT1   --------->MYB59         --------->ANAC46
-------At4g35610     <----------DOF2 ------>ZmHOX2a(1) <---------AtMYB61         --------->MYB46(3)
 
agcttagttgaccagacttataaactttaggttttgcctcctgttacgtaataatggtttggtttggtttgatcaagtcttggaaccacgacgcaggtta  20575100
                                             ----------->HVH21
                                      --------->YAB1
                            ----------->GT1<---------ANAC55(2)                    ---------->DOF2
                         --------->YAB1 --------->ICU4                 <---------ANAC58
                      --------->YAB1  <---------ICU4         <---------ANAC58    --------->AHL20(2)
      ------------------------>ANAC81--------->ICU4          <---------ANAC58    <---------AHL20(2)
-RAV1(2)       ----------->GT1       <---------ATHB12---------->DOF2   <---------ANAC58 <----------DOF2
------YAB1 ---------->DOF2  --------->YAB1 <---------ANAC46  <---------ANAC46  <-----------TBP------
 
tgtttgaaaattgaaaaagagtaaataagaatagtaaaaaatcattatgtgaacgagaaagtctgcgtgttcttgcttctgtatttaaagactttgtctg  20575200
                                                          <<<<<<<<<TBF1
                                                       <<<<<<<<<TBF1  <<<<<<<<<TBF1
                                                    <<<<<<<<<TBF1  <<<<<<<<<TBF1
                                              <<<<<<<<<TBF1  <<<<<<<<<TBF1
                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                           <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
              <---------ATHB12           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
             *TSS                       <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
          ------------>CBF           <<<<<<<<<TBF1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
     --------->ANAC46              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
     --------->bZIP60(2)          <<<<<<<<<TBF1  <<<<<<<<<TBF1  <<<<<<<<<TBF1    <----------DOF2
   <---------ALFIN1    <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<----------DOF2
----->HVH21 --------->WOX13(1)------>ZmHOX2a(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      ----------
 
acacatccacttcatcaatcgtttctctttctccttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctttttctttagaaacaacaca  20575300
                       --------->ZAT14             <--------P
                       <---------ZAT14          <---------TOE2(3)       <---------ARR11(3)
                   --------->ZAT6  <-------GAMYB<---------TOE1(3)       --------->ARR11(3)  <-------
       --------->TOE2(3)          --------->MYB55(2)                ---------->DOF2         <-------
->RAV1(1)        <-----------GT1  <---------MYB46(3)         --------->ATHB12    --------->ZAT18
 
aaccccaaaaacttaaaaaataactctacagagatggctgttggaatccttgaggttagtctgatcagtggcaaaggtctcaagcgctctgattttcttg  20575400
                                  --------->YAB1
                               ------>ZmHOX2a(1)
                           --------->ARR14(2)
                           <---------ARR14(2)
    ------>ZmHOX2a(2)      <---------ARR11(1)
    ==================================HOX2a_HOX2a
  --------->ARR11(3)      <---------CCA1(2)
  <---------ARR11(3)    <---------ANAC58                                               >>>>>>>>>ARR2
 <---------ICU4         <---------ANAC46                                 <---------ANAC58    <------MYB46(1)
 --------->YAB1         <---------ANAC55(2)        <----------DOF2       <---------ANAC58    <------MYB83
--------->ICU4          --------->ANAC55(2)   <-----------GT1         <<<<<<<<<<GT-3b  >>>>>>>>>ARR1
--ANAC58                <---------ANAC58 <---------AHL20(2)     --------->AHL20(2)    --------->ATHB12
--ANAC58             --------->GLK1(1)   --------->AHL20(2)     <---------AHL20(2)   <---------YAB1
 
gtaatgatctctctattctctcagatttcgtatcctttgatcatttaaaaaacccttttacaacaatttatatttttcttggttttgtatgattgtaggt  20575500
                  --------->CCA1(2)    --------->LBD16
                  <------ZmHOX2a(2)   --------->ANAC46                   <---------ANAC58
                 <---------ARR11(3)   --------->ANAC58                   <---------ANAC58
     <-------TEIL--------->ARR11(3)   --------->ANAC58                  <---------STY1(2)
    <------ZmHOX2a(2)                <---------LBD16               <-----------GT1
   <---------ARR11(3)              --------->ARR14(2)            <---------AHL20(2)  <----------DOF2
   --------->AGP1--------->AGP1    <---------ARR14(2)   ---------->DOF2 --------->STY1(2)
   --------->ARR11(3)     ---------->DOF2 ---------->DOF2  ----------->GT1    <-----------GT1      <
 
aagatagatccatatgttgagatccaatacaaagggcaaacccgcaaaagcagcgttgctaaaggtaatttaacttgctagtttccttctttccatattt  20575600
                                           <-----------GT1
                            <---------ANAC58
                            <---------ANAC58
          --------->At4g35610       <----------DOF2                                     <----------DOF2
          <---------At4g35610       <---------DAG2                               <---------ICU4
---------CCA1(2)            <---------ANAC46---------->ID1                      <---------YAB1   <--
 
ccaaatctctatcagcttaattcgggttatttcgtttgactttttttttcgttttatgcgagagagactatttctccaatttcatcattttcttttctat  20575700
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AGI:  At3g55460.1   
Description:  SCL30 (SC35-like splicing factor 30); RNA binding. similar to SCL30a (SC35-like splicing factor 30a), RNA binding [Arabidopsis thaliana] (TAIR:AT3G13570.1); similar to pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] (GB:BAC78592.1); similar to hypothetical protein OsI_037556 [Oryza sativa (indica cultivar-group)] (GB:EAY83597.1); similar to Os12g0572400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067091.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677)
Range:  from: 20571785    to: 20574740    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At3g55470.1   
Description:  C2 domain-containing protein. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G63220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69195.1); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973)
Range:  from: 20575214    to: 20577307    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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