Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <------ZmHOX2a(1)             <---------AtMYB61           <---------MYB46(3)         <---------ANAC58         <---------ANAC58                                                    --------->TOE1(3)         <-------GAMYB                                                   <----------DOF2<---------ZAT2        <---------MYB46(3)     <------ZmHOX2a(1)                 --------->YAB1 --------->AHL20(2)       <---------AtMYB61     <---------TOE2(3)               --------->ATHB12--------->TOE2(3) ---------MYB52(1)<-----------RAV1(2)             >>>>>>>>>TBF1<---------WOX13(1)       --------->ZAT2 ------>ATHB12<---------MYB46(3)               >>>>>>>>>TBF1--------->ICU4  ----------->GT1----------   ccattggttttggttgtggttcaggaatgtgaaggatggaacaagtgaagaagaagaagggaaagattgataaggctttcgttaaaatccagcttgtgaa  20397200                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                   <---------ANAC58    --------->ZAT6                                                                ---------->ID1  --------->ARR11(3)                             <-----------RAV1(1)          <---------MYB52(1)  <---------ARR11(3)                    ----------->GT1   <----------DOF2   <---------ANAC58  ------- ->GT1                     <----------DOF2   <---------AHL20(2)             <---------ANAC58  <------   ttagtatctctacatatatatgtgtgtttcttttttcatgtatggttttaaatgttgcaactttgtttcttaagtttttcgtttgtcgtgtttgagaaat  20397300               --------->ATHB12              <---------YAB1                        --------->ZAT6                                 --         ---------->DOF2                        <---------MYB52(1)           <---------GLK1(2)    --- -->GLK1(1)  <---------GLK1(2)           ---------->DOF2                  --------->AHL20(2)<-------- ---GLK1(1)--------->ICU4    <-----------HVH21  --------->DOF5.7(2)   --------->YAB1    <---------YAB1   ccgattggaagtaaagattattgatataagatgtcaactacaattaagccgttaacacaaactcaaaaactttcataaaaattctcaaatattagtgtca  20397400                                                                         <---------AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                     --------->AHL20(2)                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)                                                                   <---------AHL20(1)                                                                  --------->YAB1                                                                --------->AHL20(2)             <-----                                                               <---------AHL20(2)           ---------                                                          <---------AHL20(1)             ------>ZmHOX2a(1)                                                          <---------AHL20(2)    --------->ARR11(3)          --------->TOE2(3)                               --------->AHL20(1)    <---------ARR11(3)  ---------->DOF2                             <---------ICU4   --------->AHL20(2)       --------->TOE2(3) ------->AHL20(2)                            <---------YAB1<---------AHL20(2)  --------->GLK1(1) ------>AHL20(2)     <------ZmHOX2a(1)      <-----------GT1--------->AHL20(2)--------->YAB1 <-------- -ZAT6   ----------->GT1                   --------->YAB1 --------->AHL20(2)<---------YAB1 <---------CCA1(2)   ttaaaaaagcattgttaatctgaggactgtatacattccaaagaattatcatttcccaaatttatttaaaataattttatgatatctaatcctaaatctt  20397500                                                                                                *TSS                                                                                                -----                                                                                               ------                                                                                       <---------ZAT18                                                                                     --------->At4g35610                                                                                     <---------At4g35610                                                                                     --------->ZAT2                                                                                  <---------At4g35610      <------ZmHOX2a(1)                                          <---------AHL20(2)  <---------ZAT2     ----------->GT1                   <---------TOE1(3)         --------->AHL20(2) ----------->RAV1(1)    <---------TOE2(3)                  <---------TOE2(3)       <-----------TBP <---------At4g35610 -----DOF2               --------->ANAC58        <---------TOE1(3)             --------->At4g35610 >ARR11(3)               --------->ANAC58        <---------TOE2(3) <---------YAB1 --------->At4g35610 -ARR11(3)  <----------ID1             --------->MYB59   ---------->DOF2      <-----------RAV1(1)   tttgttgaggaaaaaaaacaaaaaaacaagtaaaccttgtttaggtttattagggttttaaaagtatttatatttgttttctgctgcagcagactcaaaa  20397600                                   <------NtERF2                                  ------>NtERF2                                  <---------ATERF1(1)                                 --------->O2                                 <---------O2                                 --------->DEAR3(1)                                 <---------DEAR3(1)                               --------->LBD16                          ------>ZmHOX2a(1)                               ------>NtERF2                           <---------MYB59                              <---------RAP2.6(2)                 --------->SPL7                              <---------LBD16                    <---------MYB52(1)                             <---------LBD16                    --------->LBD16                         <---------DAG2                        <---------ANAC55(2)                  < ---->DAG2               <----------DOF2                       --------->ANAC46  <----------DOF2----- ---->DOF2              <---------DAG2                         --------->ANAC55(2)        --------->ZAT14   agctaagtaaactactcaagtccctcccttttccggcgtcgctattctcagtctcattctgtctcccgtaagtcctaactaagctttctctcttcagtct  20397700              <---------YAB1           <---------MYB52(1)          <-------GAMYB      ------>NtERF2     --------->DEAR3(1)                                                             <---------REM1(1)     <---------ALFIN1                               <-----------GT1              <-----------RAV1(1)    --------->ATERF1(1)          <----------DOF2  <---------DAG2                 <---------ZAT6   <---------ATERF1(1)       <-----------GT1<---------ICU4                  <---------At4g35610  ---- ---------At4g35610         <-----------GT1 <-----------GT1          <---------ARR14(2)          <--- ------------------>TaNAC69(2)  <---------DAG2    <----------DOF2    --------->ARR14(2)     ---------   tcagcctccgcccgttattgttgacaagttttagcctttttgttaattactactttactactcttgttgtgaatttgctgctactgttgaagccatggaa  20397800                                                            --------->ARR14(2)                                                           <---------GLK1(2)                                                          --------->LBD16                          <-                                                        <---------LBD16                          ----                                          <---------At4g35610                                    <---   <---------GLK1(2)                 <----------DOF2  <------ZmHOX2a(2)                      <-------   <---------ARR14(2)            <---------CCA1(2)<---------ATHB12                           <-------   --------->ARR14(2)     <---------MYB52(1) <-----------HVH21                 --------->ANAC46  ---- ----->ZAT2             =====================================HOX2a_HOX2a   <---------At4g35610   <--- ------ZAT2             ------>ZmHOX2a(1)--------->ANAC46--------->LBD16   --------->At4g35610<------ >AtLEC2          <<<<<<<<<TBF1  ---------->ID1 --------->WOX13(1)     <-----------HVH21    ---------   gctcggattttgcagtcttcttcttcctgttattcgtctctttacgctgtcaatcgatcccggttctcttctgtgtcatctccgaaacctttctccgtca  20397900       --------->At4g35610     <-----------RAV1(2) ---------DOF2 ----->At4g35610 ------ZAT2 ----HVH21                                                               <---------bZIP60(1) ----TGA1                                                           --------->YAB1                  - ----->ZAT2                        <---------YAB1                  --------->ICU4                  <- ------At4g35610          <---------ANAC46                       ---------->DOF2                   -- ---MYB52(1)          <------ZmHOX2a(1)        ---------->DOF2--------->YAB1    --------->YAB1   ---- >ANAC46<---------------------WRI1<-----------GT1        --------->ZAT18 --------->bZIP60(1)---------   gctttgctcagacgacgagaacaaggactcgtgtattatccatgtcgaagaaagatggtcgcactgataaagatgatgacactgatagtctcaattacaa  20398000                                                                            <------MYB83                                                                            <------MYB46(1)                                                                        --------->ARR14(2)                                                            <---------HSFB2a(2)               <------                                                            --------->HSFB2a(2)               <------MYB46(1)   <-----------RAV1(1)           ----------->GT1            --------->LBD16--------->MYB111(1)------- -------->GLK1(2)             <---------ZAT2                ------>ZmHOX2a(1)                 <------MYB83 --------GLK1(2)          <----------CDC5                  <---------LBD16 <---------AtMYB61 -------- ------->ARR11(3)        --------->At4g35610      --------->ICU4        <---------ARR14(2) <---------MYB52(1) ------->ARR10       <-----------RAV1(1)   ------->TEIL   ----------->RAV1(2) <---------AtMYB61     - >YAB1<---------ANAC46   <---------At4g35610    ---------->DOF2   <---------AtMYB61  <----------DOF2<   agattctggtgttgatatcgatgctggtgctgagcttgttaaacgaatcgcaaagatggctcctggaattggtggatttggtggtctctttccattaggt  20398100  Previous    Next  AGI:  At3g55005.1    Description:  TON1B (TONNEAU 1B). similar to TON1A (TONNEAU 1) [Arabidopsis thaliana] (TAIR:AT3G55000.1); similar to unknown [Populus trichocarpa] (GB:ABK93130.1); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594) Range:  from: 20394933    to: 20397359    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g55010.1    Description:  ATPURM/PUR5; phosphoribosylformylglycinamidine cyclo-ligase. Identical to Phosphoribosylformylglycinamidine cyclo-ligase, chloroplast precursor (PUR5) [Arabidopsis Thaliana] (GB:Q05728;GB:Q9M2W5;GB:Q9SV49); similar to 5'-aminoimidazole ribonucleotide synthetase [Solanum tuberosum] (GB:AAR06290.1); contains InterPro domain AIR synthase related protein, C-terminal (InterPro:IPR010918); contains InterPro domain Phosphoribosylformylglycinamidine cyclo-ligase; (InterPro:IPR004733); contains InterPro domain AIR synthase related protein; (InterPro:IPR000728); contains InterPro domain PurM, N-terminal-like; (InterPro:IPR016188) Range:  from: 20397596    to: 20399783    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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