Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------MYB52(1)                                                         <----------DOF2                                                     <------NtERF2                                                    <---------ATERF1(1)                                          XXXXXXXXXXXXXXXXXXXX>MIR398A                                         <---------GLK1(2)                                         --------->ARR14(2)                                   <---------YAB1  --------->RAP2.6(2)                                  <---------AHL20(2)------>NtERF2                                <---------YAB1     <---------ATERF1(2)     --------->YAB1           <---------ICU4       --------->ATERF1(2)     <---------ICU4           <--------HAHB4       <---------RAP2.6(2)    <---------ATHB12          --------->ATHB51     --------->DEAR3(1)    --------->ICU4            --------->YAB1      --------->RAP2.6(3)        <----------DOF2 ----ICU4                     -------->ATHB1    --------->ANAC58       <-----------GT1 -->ICU4                     --------->ICU4     --------->ANAC58 --------->YAB1                ------ >YAB1 <---------YAB1 --------->ANAC46   <---------ARR14(2)      --------->TOE2(3)          <--------   tgagcaatgatgaatacatgttatacgtcgaattattattttggattctcaagccggccctttgctatcttattttctcctttacaacattttttaaccc  20312600                                                                           --------->ANAC46                                                                     -------->HAHB4                                                                     <--------ATHB1                                                                     <---------ICU4                          --------->ATHB12                          <---------ATHB51                         <---------YAB1                             <---------ATHB12                         --------->ICU4                             --------->ICU4               <----------DOF2     --------->ATHB12         ----------->RAV1(1)             <------NtERF2<---------ICU4     <---------ANAC46     --------->YAB1    ---------->DOF2      <---------ATHB12    <---------ANAC58<---------ZAT14 <-----------HVH21    ------------>ATHB5     <---------ANAC58--------->ZAT18<-----------HVH21 ->GAMYB   <---------DEAR3(1)     <---------YAB1            --------->AtMYB61                -------- ---GT1    <---------RAP2.6(2)    --------->ICU4            <---------ALFIN1--------->LBD16<---------   cattgtcaaagagtcggctttgagcccatgattgtaatgaatggatagcttgaatattgcgaccacactaataattcccgtcaaatatttgtttaactta  20312700                           <---------AHL20(2)                           <---------AHL20(1)                                --------->ANAC58                           --------->AHL20(1)                                --------->ANAC46     ---                           --------->AHL20(2)                                --------->ANAC58  ------                <-----------GT1     <---------AHL20(1)                     --------->ANAC46    <-----        ------->MYC3      <---------AHL20(2)                          --------->ANAC46        <------  ----------->HVH21 --------->ANAC58<---------AHL20(2)               --------->At4g35610      <------ ->TOE2(3)  ------->TEIL  --------->AHL20(2) <---------ICU4          <---------At4g35610    --------- --GT1  <-------MYC3--------->ANAC58--------->AHL20(2)           <-----------GT1         --------->TOE2(3)   atgtatgacacatgtattttacgagcaaataaattcaaaaaatttaagcattagcgaaaacattgtttctccgctccacaagacactaaaacataaataa  20312800                                         <-------GAMYB                                        <---------DEAR3(2)                                        <------MYB46(1)                                        <------MYB83                                        <---------MYB46(3)                                       <---------DEAR3(1)                              --------->TOE2(3)   <---------AHL20(2)                  <---------DREB2C(2)                            <--------HAHB4  --------->AHL20(2)              --------->ZAT14                                     <---------ICU4  <---------AHL20(2)           <---------At5g28300                                   --------->ICU4 ------>AHL20(2)              <-----------GT1               --------->TOE2(3)        <---------YAB1 --->YAB1                    --------->MYB46(3)             --------->TOE1(3)       <---------ARR11(3) ----ICU4                  --------->WOX13(1)    <---------ICU4                     --------->ARR11(3) ---ATHB51<---------ATHB12<---------AHL20(2)    --------->ICU4                     --------->YAB1 ---AHL20(2)             --------->AHL20(2)     <---------YAB1                    --------->ICU4 >YAB1  --------->WOX13(1)--------->AHL20(2)    <---------ATHB12           ----------->GT1   tgaattaaatcagtcattctacagaaaattaatcaccgtagtcggttgccatcattccaaaaccttaaaaaaaacccatgtaaaatgatcattaacaaca  20312900                  ------>MYB83                  ------>MYB46(1)                 ----------->RAV1(1)               --------->MYB46(3)             ------>MYB46(1)             ------>MYB83                                  --------->At4g35610           <---------MYB59                                 <---------At4g35610           ------->GAMYB                             <-----------TGA1            --------->MYB46(3)           --------->AtMYB61                         <-----------HVH21           --------->DREB2C(2)          --------->MYB46(3)                        <---------O2                 --------->DEAR3(1)         --------->ANAC58    ----------->GT1        --------->TGA1a             --------->DEAR3(2)         --------->ANAC58   <---------TOE2(3)       --------->bZIP60(2)     <-----------HVH21        ------->GAMYB      ---------->DOF2          --------->O2    <---------ICU4 ------>MYB83       <---------MYB55(2)  ===================================bZIP_DOF     --------->ANAC46       <---------MYB111(2)--------->AHL20(2) =================bZIP_DOF <-----------GT1        <------       --------->MYB46(3) <---------AHL20(2) ---------->DOF2       ----------->TBP ------>MYB46(1) *TSS   acaacaacaacaaccaaaccaacaaaaattaaagtaaaaacagagtccaaagcctcgtcacatctgcccataaatacccttcaccgactcaccatcttac  20313000                                               --------->MYB52(1)                                           <---------TOE2(3)                                     <---------ARR11(3)                           --------->YAB1                                     --------->ARR11(3)                        --------->YAB1                                    <---------CCA1(2)                   <------MYB46(1)              <---------ARR11(3)   <---------AHL20(1)                   <---------ANAC46              --------->ARR11(3)   <---------ARR11(3)                   <------MYB83             <---------CCA1(2)     --------->ARR11(3)                  --------->MYB46(2) -----GT1  --------->YAB1  <----------DOF2 <---------YAB1              --------->MYB111(2)  ---------   cacatcaattctctcatatctctctctcactttcgaatatatcttaagataacagagacacatactcttaagtttggtgaagaataagaagacaatgacg  20313100                      ------>ZmHOX2a(2)                    --------->ARR11(3)                    --------->AGP1                   --------->GLK1(1)         <------MYB46(1)         ----------->GT1                                     --------->TOE2(3)         <------MYB83<------ZmHOX2a(2)                --------->At4g35610        --------->MYB111(2)                           ----------->RAV1(2)        <---------MYB46(3)                          <---------ALFIN1        --------->MYB55(2)                          --------->AtMYB61        <---------DEAR3(1)       ---------->DOF2    --------->DEAR3(1)        <---------AtMYB61     --------->LBD16      --------->MYB46(3)        --------->MYB111(1)   <---------HSFB2a(2) ------>MYB83       <--------P  <---------GLK1(1)              ------>MYB46(1)       <---------MYB55(1)     --------->HSFB2a(2)<---------ALFIN1               <---------ZAT2     <---------MYB46(3)      <---------LBD16     --------->ANAC46               --------->ZAT2     --------->MYB55(2)<----------DOF2          <---------MYB55(2)     --------->ANAC46    --------->ALFIN1<---------ARR11(3)    --------->YAB1   ------->TEIL--------->ANAC58        <----- -->TGA1--------->MYB46(2)  <---------LBD16     --------->MYB46(3)     --------->ANAC58   --------->ALFIN1   aaggaagtggttggtgataagagatctttctccgggaaagactatcaagacccaccacctgaacctctattcgacgctactgagcttgggaagtggtctt  20313200                                                         <---------YAB1                                                       --------->YAB1                              --                                                       <---------ICU4                              <-                                          ------>ZmHOX2a(1)   <-----------HVH21         =============     <---------ZAT18                <----------DOF2   <---------YAB1                    <------ZmHOX2a(2)     --------->ZAT14          <---------ALFIN1     <---------YAB1   <---------MYB46(3) <---------ARR14(2) -----DOF2           <-------TEIL   <---------DAG2 --------->ICU4   ----------->GT1    --------->ARR14(2)   tctacagagctctcatcgctgagttcatagccactctccttttcctctatgtcactattatgactgtcatcggttacaagagccagaccgatccagccct  20313300                                                                                     <---------ATERF1(1)                                                                                     ------>NtERF2                                                                                    --------->RAP2.3(2)                                                                                    <---------ATERF1(2)                                                                                    --------->RAP2.6(2)                                                                                    --------->ATERF1(2)                                                                                    --------->DEAR3(1)                                                                                    --------->RRTF1(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->DREB2C(2)                                                                                    --------->RRTF1(3)                                                                                   --------->ATERF1(1)                                                                                   <---------LBD16                                                                                   --------->ERF1                                                                                   --------->RAP2.3(1)                                                                                  --------->ABI4(1)                                                                                  ------>NtERF2                                                                                  <---------ATERF1(1)                                                                                 --------->DEAR3(1)                                                                                 <---------ALFIN1                                                                                --------->DEAR4(2)                        <---------RAP2.6(2)                                     --------->ORA47(2)                        <---------ANAC46                                        --------->ATERF1(1)                        <---------ANAC58                                        --------->DEAR3(2)                        <---------ANAC58                    ------>ZmHOX2a(2)   --------->MYB46(3)              <-----------RAV1(2)                         --------->ARR11(3)   <---------ATERF1(1)           <---------ZAT14    <---------TOE1(2)           <---------ARR11(3)  <---------ALFIN1           --------->REM1(2) ------>ZmHOX2a(1)        <---------ANAC58       <---------ZAT14           --------->ZAT14<------NtERF2               <---------ANAC46       --------->ZAT14   ----------->HVH21   <------NtERF2                  <---------ANAC58       --------->ZAT18   ------>ZmHOX2a(1)--------->ATERF1(1)              <------NtERF2         --------->ANAC46 ------->ARR14(2) <---------ANAC58              <---------AtMYB61         --------->At4g35610 --------ARR14(2) <---------ANAC58            <----------DOF2       ------>ZmHOX2a(1)--------->LBD16 =========HOX2a_HOX2a<---------DEAR3(1)      <----------DOF2===============HOX2a_HOX2a<------NtERF2   gaatcctgaccagtgtacaggcgttggcgtccttggtatcgcatgggcctttggtggcatgatcttcatcctcgtctactgcaccgccggcatctctggt  20313400                                                                   ---------->DOF2                                                               <---------ZAT6                                                             <---------ANAC58                                                             <---------ANAC46                                                             <------MYB83                                                             <---------ANAC58                                                             <------MYB46(1)                                                            <---------MYB46(3)                                                            --------->MYB46(2)                                       <---------AHL20(2)   <---------AtMYB61               <----------DOF2        <---------AHL20(2)    --------->MYB111(1)                     <         <----------DOF2              <---------AHL20(1)<------MYB83                                -  ------>ZmHOX2a(2)             --------->YAB1         --------->MYB59<---------At4g35610        ---- --------->GLK1(1) <-----------GT1    --------->AHL20(2)<------MYB46(1)                    <---------WRKY12   ctgatctctctctttctctttttacatcgctcatttgtaataaaattcaaacgtagtttggtttggtgttaaagctcacataaatgttttggttcaacgt  20313500  Previous    Next  AGI:  At3g54820.1    Description:  PIP2;5/PIP2D (plasma membrane intrinsic protein 2;5); water channel. Identical to Probable aquaporin PIP2-5 (PIP2-5) [Arabidopsis Thaliana] (GB:Q9SV31); similar to PIP2B (plasma membrane intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT2G37170.1); similar to plasma membrane intrinsic protein 2-2 [Pyrus communis] (GB:BAB40143.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 20312999    to: 20314988    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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