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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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    <---------YAB1                                                          <---------ARR11(3) <----
---->REM1(1)                                                      <------MYB83                 -----
-----ALFIN1                                                       <------MYB46(1)  <-----------GT1<-
-ANAC58                                                           ----------->GT1 --------->WRKY38(1)
-ANAC46                        --------->ZAT6        ------>ZmHOX2a(1)    --------->ANAC58  <-------
-ANAC58                     <-----------GT1 <---------YAB1 <-----------GT1--------->ANAC58 <--------
 
acctcttctaattgtgtttttttataagaaattaccactatcaagttgtcattctcctcgttttacatttggtaaacaagctctattgaccatttatgtt  20224100
                                               --------->ANAC58
                                               --------->ANAC58
                                             --------->At4g35610
--------->ZAT6                       <---------ARR14(2)                                          <--
-----REM1(1)                         <---------ARR11(3)                                          <--
------>GT1                 <---------ZAT6<-----------HVH21                                       ---
----------GT1        --------->ATHB12--------->ARR14(2)       <---------ANAC58      --------->GLK1(2)
----RAV1(1)     <---------TOE2(3)    --------->GLK1(2)        <---------ANAC58     <---------GLK1(2)
-TOE2(3)       ---------->DOF2 ----------->GT1 --------->ANAC46               --------->MYB52(1)----
 
gtaacactacttcaagactaaagttgattagagatagcaaaatctgtcaccagcaaattgtgtttccttgttaaatactagtaacagattccaaacacat  20224200
                                                                                         <---------ZAT14
                                                                               ---------->DOF2
                                                                       <-------TEIL --------->ZAT18
                                                                   <---------TOE2(3)<---------ARR14(2)
        ----------->GT1                                           <---------DOF5.7(2)  --------->ANAC46
-------AHL20(2)                                                 --------->DOF5.7(2) --------->ZAT14
-------AHL20(1)                --------->AHL20(2)--------->MYB52(1)<---------TOE1(3)<---------ZAT14
------>AHL20(2)   <-----------GT1        ----------->RAV1(1)   --------->TOE2(3)--------->DAG2  ----
----->AHL20(2)  --------->AHL20(2)  --------->AHL20(2)   ---------->DOF2  --------->AtLEC2   <------
 
taaattttgtgaagttaaatttaacaacatactataaaataaaacaacacataaacggattaaagacgttaatgttcatccaaaaagtatactgaacttt  20224300
       --------->DEAR3(2)
      <---------At5g28300
     <-----------GT1
 <---------AHL20(2)            <---------ETT(1)            <-----------GT1
 --------->AHL20(1)         --------->ARR14(2)        <---------AHL20(2)                      <-----
 --------->AHL20(2)         <---------ARR14(2)        --------->AHL20(2)                     -------
<---------AHL20(2)         <---------CCA1(2)    <-----------GT1                             --------
--------->AHL20(2)   <---------ZAT6             --------->YAB1                       --------->YAB1
----->AHL20(2)       ----------->GT1         --------->WOX13(1)         <-----------GT1<---------YAB1
----DOF2          <-----------GT1        ----------->GT1   <---------ICU4        <------ZmHOX2a(1)
 
taaataatttaccgacgaattgtactgtttatatccgaccaatatagttaatcacattttaatcactgcataaatttactcataggaattacaattaccg  20224400
                                                                        <------NtERF2
                                                                       ------>NtERF2
                                                                       <---------DEAR3(2)
                                                                       <---------ORA47(2)
                                                                      <---------DEAR3(1)
                                                                   --------->MYB52(2)
                                                                   <---------MYB46(3)
                                                                  --------->SPL7
                                                               <---------ANAC58
                                                            <-----------GT1
                                                           --------->KAN4(2)              <------NtERF2
                                                          <---------HSFB2a(1)           --------->RAP2.3(2)
                                                          <----------TaMYB80            --------->DEAR3(1)
                                                          --------->HSFB2a(1)         ------>NtERF2
                                                          <---------KAN4(1)           <---------ATERF1(1)
                                                          --------->KAN4(1)          --------->ANAC58
                                                         ---------->TaMYB80          --------->ANAC58
                                                         --------->ARR14(2)          --------->ANAC46
                             --------->AHL20(2)          <---------KAN4(2) <------NtERF2--------->RAP2.3(3)
----MYB59               <------ZmHOX2a(2)          ------>NtERF2 <---------MYB52(1) <---------LBD16
---------->AG          ------------------------>ANAC81  <---------GLK1(2)<---------ANAC46------>NtERF2
->MYB52(1)       <-----------RAV1(1)         --------->MYB52(1)<---------ANAC58 <----------DOF2
 
aattagtttcggtttaaaatttgttggatcaataaaacaaaaaaaaaaaaacgatgccagaatattccgttcgtcggcgtagtctttcccgcccccaaat  20224500
                                                                                                 <--
                                                                                                ----
                                                                                                ----
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                               -----
                                                                                               <----
                                                                                               -----
                                                                                               -----
                                                                                              ------
                                                                                              ------
                                                                                              ------
                                                                                              ------
                                                                                             -------
                                                                                             <------
                                                                                            --------
                                                                                            --------
                                                                                          ----------
                            <-----------TGA1           <---------ZAT14                   ---------->CDC5
                           <---------ANAC58            --------->ZAT14                 --------->TOE2(3)
                           <---------ANAC58 <---------ATHB12                           --------->AtMYB61
                <---------GLK1(2)    *TSS --------->WOX13(1)                        <---------ALFIN1
 
tatctgagcaaaaaccctagactctcgatttcgtcacgattttctcaatcaccttcactatactgcttcgatggactctcactcttcccacctcaacgcc  20224600
                                                                                                  --
                                                                                                <---
                                                                                             -------
                                                                                             -------
                                                                                             -------
                                                                                             -------
                                                                                         ------>NtERF2
                                                                                       <------NtERF2
                                                                                       --------->ATERF1(1)
       <---------HSFB2a(2)                                                             --------->ERF1
 <---------ATHB12                                                                     <---------ATERF1(1)
----NtERF2                                           <-----------HVH21                ------>NtERF2
-->NtERF2                                            <-----------TGA1                 --------->ABI4(1)
----->LBD16                                         --------->ANAC46                 --------->DREB2C(2)
---->RRTF1(3)                                     ------>NtERF2                      --------->RAP2.3(3)
---->DREB2C(2)                                    <---------ATERF1(1)                --------->RAP2.6(2)
---->RAP2.3(2)                                 <---------ATERF1(1)                   --------->DEAR3(1)
---->RAP2.6(2)                                 ------>NtERF2                         --------->ATERF1(2)
---->DEAR3(1)                                 <---------ALFIN1                       <---------ATERF1(2)
---->ATERF1(2)                                --------->DEAR3(1)                     --------->RRTF1(2)
-----ATERF1(2)                                --------->ANAC46                       --------->RAP2.3(2)
---->RAP2.3(3)                               --------->ATERF1(1)                     --------->RRTF1(3)
---->RRTF1(2)                               ------>NtERF2                            --------->ANAC46
--->ERF1 --------->LBD16                    <---------ATERF1(1)                     --------->RAP2.3(1)
--->RRTF1(1)                               --------->DEAR3(1)                       --------->ERF1<-
--->RAP2.3(1)                              <---------ALFIN1                        <---------ATERF1(1)
--->ORA47(2)                             <---------ATERF1(1)                      --------->ANAC46<-
>GAMYB --------->HSFB2a(2)               --------->LBD16                  --------->ANAC46 ---------
---ATERF1(1)                             ------>NtERF2<---------MYB52(1)  --------->ANAC58 <--------
->ANAC46--------->ANAC46          <---------YAB1 --------->DEAR3(1)       --------->ANAC58--------->MYB46(3)
->DEAR3(1)                     ------>ZmHOX2a(1)--------->ATERF1(1)   <---------MYB52(2)--------->DEAR3(1)
>DOF2  <---------LBD16   ------>ZmHOX2a(1)--------->ATERF1(1)         --------->MYB46(3)<---------ALFIN1
 
gccaatcgttcccgcagttctcagactccttctccttctcattccgcctccgcctccgtcacttcttctctccacaaacgcaaactcgccgccaccacgg  20224700
                                                                                <------NtERF2
                                                                               <---------ERF1
                                                                               ------>NtERF2
                                                                               <---------RRTF1(1)
                                                                               <---------ATERF1(1)
                                                                               <---------DEAR4(2)
                                                                               <---------RAP2.3(1)
                                                                               <---------ORA47(2)
                                                                              <---------RAP2.3(3)
                        --------->ANAC58                                      <---------RAP2.3(2)
       ------>NtERF2    --------->ANAC58                                      <---------DEAR3(1)
       <---------At4g35610                                                    --------->O2
------->At4g35610       --------->ANAC46                                      --------->DEAR3(1)
------DEAR3(1)       ===================HOX2a_HOX2a                 <---------MYB52(1)
-->bZIP60(2)         =====================================HOX2a_HOX2a         <---------O2
-->ANAC58            <------ZmHOX2a(2)                              <---------ARR14(2)
-->ANAC58            ==========================HOX2a_HOX2a      ------>NtERF2--------->ATERF1(1)
-->ANAC46           <---------ARR11(3)                 ------>ZmHOX2a(1) --------->ANAC46
--------At4g35610   --------->ARR11(3)    <----------DOF2       <---------At4g35610 <----------DOF2
-----NtERF2  --------->At4g35610        ------>ZmHOX2a(1) ------>ZmHOX2a(1)----------->HVH21
>AtMYB61 --------->RAP2.6(2)     ------>ZmHOX2a(1)    XXXXXXXXXXXXXXXXXXXXX>MIR472------>NtERF2 <---
-ALFIN1--------->At4g35610   <---------ALFIN1      ------>ZmHOX2a(1)--------->ARR14(2)   --------->MYB46(3)
 
cagcgaatgcagccgcttctgaagatcacgcccctccttcttcctctttccctccttcctccttctctgccgatactcgcgacggcgctttaacctccaa  20224800
                            <------NtERF2
                            --------->RAP2.3(1)
                           ------>NtERF2
                           <---------ATERF1(1)
                           <---------RAP2.3(1)
                          --------->RAP2.3(2)
                          <---------ANAC46
                          --------->DEAR3(1)
                          <---------DEAR3(1)
                         ------>NtERF2
                         <---------ABI4(2)
                         <------NtERF2
                         --------->DEAR4(2)
                         --------->ERF1
                         --------->ATERF1(1) ------>ZmHOX2a(2)
                         --------->RAP2.3(1) ======================HOX2a_HOX2a
                         --------->RRTF1(1) <------ZmHOX2a(2)
                         --------->RAP2.6(1)=======================HOX2a_HOX2a
                        <---------ATERF1(1)<---------GLK1(2)
                        <---------ERF1     <---------ARR14(2)
                        <---------ORA47(2) --------->AGP1
                        <---------RAP2.3(1)--------->ARR14(2)
                       <---------DEAR3(1)  --------->ARR11(3)
                      <---------LBD16      <---------ARR11(3)
                  --------->At4g35610     <---------At4g35610                            ------->TEIL
                  <---------At4g35610  <-------TEIL           --------->CCA1(2)          --------->ARR14(2)
              --------->ARR14(2)     <---------ARR14(2)      --------->ARR11(3)          <---------ARR14(2)
             --------->GLK1(1) <---------ARR14(2)            --------->ARR14(2) <---------ANAC46  --
             --------->At4g35610     <---------GLK1(2)       <---------ARR14(2) <---------bZIP60(2)
             <---------GLK1(1) --------->ARR14(2)    ------->TEIL     <---------------------WRI1  --
  ------->TEIL<---------ARR14(2)     --------->ARR14(2)     <------ZmHOX2a(1)----------->TGA1   ----
------ATHB12<-----------ARR10--------->DEAR3(1)------>ZmHOX2a(1)    <---------ANAC46<------ZmHOX2a(1)
 
cgatgaactcgagagcatctccgctcgcggcgccgatacagattcagatcctgatgaatcagaggatatagtcgtggatgatgacgaggacgaatttgct  20224900
                                     --------->DEAR3(1)
                                    --------->RAP2.3(1)          --------->MYB52(1)
                                   ------>NtERF2                 <---------DOF5.7(2)
                                   --------->ABI4(1)            <---------WRKY45
                                  --------->DEAR3(1)            <---------WRKY38(1)
                                  --------->ANAC46              <---------WRKY12
                                 --------->MYB46(3)        --------->ZAT14            --------->ZAT14
           <------ZmHOX2a(1)    <---------At5g28300      <---------LBD16            --------->ANAC46
     <------ZmHOX2a(1)   <---------ALFIN1             --------->ZAT2              --------->ZAT6
---->ZmHOX2a(1)         --------->LBD16               --------->At4g35610       ----------->RAV1(1)-
------->LBD16       <---------ARR14(2)                <---------At4g35610    --------->ANAC58   ----
------->RAV1(2)     --------->ARR14(2)------>NtERF2   <---------ZAT2         --------->ANAC58   ----
 
cctgaacaggaccaggactcttctatccgcacattcaccgccgctcgactcgattccagctctggagtcaacggttcgagtcgcaacactaaacttaaga  20225000
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AGI:  At3g54600.1   
Description:  DJ-1 family protein. similar to YLS5 (yellow-leaf-specific gene 5) [Arabidopsis thaliana] (TAIR:AT2G38860.2); similar to hypothetical protein OsI_035516 [Oryza sativa (indica cultivar-group)] (GB:EAY81557.1); similar to Os11g0591600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068186.1); contains InterPro domain ThiJ/PfpI (InterPro:IPR002818)
Range:  from: 20221837    to: 20224058    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At3g54610.1   
Description:  GCN5 (HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 1); H3 histone acetyltransferase. Identical to Histone acetyltransferase GCN5 (HAG1) [Arabidopsis Thaliana] (GB:Q9AR19;GB:O22654;GB:Q7G1G9;GB:Q9M1G7); similar to Os10g0415900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001064604.1); similar to histone acetyl transferase GNAT/MYST 101 [Zea mays] (GB:NP_001105145.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Bromodomain (InterPro:IPR001487); contains InterPro domain GCN5-related N-acetyltransferase; (InterPro:IPR000182)
Range:  from: 20224538    to: 20228631    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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