Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ANAC58                   ------>MYB83                                         --------->ANAC55(1)                ------>MYB46(1)                                         --------->ANAC46                 <---------MYB46(2)                                         --------->ANAC58                 <---------MYB59                                        ------->TEIL<---------YAB1        <---------MYB111(1)                             --------->At4g35610  --------->YAB1        ------->TEIL    --------->ARR11(3)                             <---------At4g35610 <------ZmHOX2a(2)  <---------------AtSPL8     <----- -->TOE2(3)                --------->ZAT14      <---------ARR11(3)  <---------------AtSPL3     ====== -->TOE1(3) <---------ARR11(3)          <---------LBD16     <---------REM1(1) <---------WOX13(1) ---MYB59   --------->ARR11(3)--------->MYB46(3)--------->ARR11(3)  --------------->AtSPL8    <------ --GT1  ---------->DOF2    <---------ZAT14     <------ZmHOX2a(1)   ---------->DOF2 <---------MYB59   aacccctagcaaaagataattctttgttctgaactgccgatgcacggaaggatcatgaattgatgaagggaaagtacctaattgacctaagaactagatc  20147400                      <-------GAMYB                                                <---------ICU4                     ----------->GT1                                               --------->ATHB12                 <---------ARR14(2)            <---------WRKY12                    --------->YAB1                 --------->ARR14(2)          <-----------HVH21         <---------TOE1(3)                <------ZmHOX2a(1)           --------->At4g35610        <---------TOE2(3)           --------->ALFIN1               <-----------RAV1(2)         --------->MYB52(1)         <---------At4g35610         <---------GLK1(2)                <---------DOF5.7(2)         --------->At4g35610         --------->ARR14(2)             <---------MYB52(2)       <-----------RAV1(2)       --------->At4g35610               --------->At4g35610       <------- -ZmHOX2a(2) <-----------RAV1(2) <---------LBD16                   --------->ZAT2 --------->ICU4 ======================HOX2a_HOX2a   <---------ARR14(2)   <---------AHL20(2)      <---------YAB1 ---ARR11(3)<-------TEIL         <---------At4g35610----------->GT1<---------At4g35610  ----------->RAV1(2)   aaatccaattcaggtgcaggatagggttgaattttagcggaatctcaggtcaattggtaatttatctgcagctaacgtagttcgatgattacctgggcac  20147500                                       <---------GLK1(1)                                      <-----------ARR10                                      --------->ARR14(3)                                      --------->ARR14(2)                                      <---------ARR11(3)                                           ==                                      <---------ARR14(2)                                           --                                      <---------ARR14(3)                                          ---                                      --------->ARR11(3)                                          ===                                 <---------ZAT2                                                   <--                                 --------->At4g35610                                             ----                                 --------->ZAT2                                                  <---                                 <---------At4g35610                                             <---                              --------->TGA2(2)                                                  ----                             <-----------HVH21                                                   <---                             <-----------TGA1                                                <-------                             --------->TOE2(3)                                            --------->ABI4(2)                            ==============================bZIP_DOF                        <-------TEIL                            --------->bZIP60(2)                                        <---------ANAC58                            --------->ANAC58                                           <---------ANAC46                            --------->O2------>ZmHOX2a(2)                              <---------ANAC58                            --------->TGA1a    <----------DOF2                        <---------DEAR3(1)                       <---------ATHB12<---------HSFB2a(1)                           --------->ZAT18                     --------->WOX13(1)<------ZmHOX2a(2)                             --------->ZAT14                   <---------ATHB12  <------ZmHOX2a(1)                        <---------ANAC58   <---              ------>ZmHOX2a(1)<-----------RAV1(2)      <---------YAB1        <---------ANAC58  <----              ================================HOX2a_HOX2a            <---------YAB1  <---------ZAT14              =================================HOX2a_HOX2a       <----------DOF2<---------MYB52(1)--- --ZAT18  <---------ARR11(3)--------->ANAC58 ---------->ID1    ---------->ID1 <---------ANAC46  <----   atagaagaacaagttcctacaatcaatgaaacgtcagcaggatcttcgtctttatgttttgattcgtctttttcattgtttcgtttgtgcggtgcatcgg  20147600                                   ------>ZmHOX2a(2)                                   ==============HOX2a_HOX2a                                  <------ZmHOX2a(2)                                  ===============HOX2a_HOX2a                                 --------->ARR14(2)                               --------->LBD16                               <---------ATERF1(1)                             <------NtERF2                             <---------LBD16                            ------>NtERF2                            --------->ABI4(1)                           --------->DEAR3(1)                           --------->RAP2.3(2)                           --------->RAP2.3(3)                           --------->RRTF1(3)                           --------->RRTF1(2)                           --------->ATERF1(2)                           <---------DEAR3(1)                           <---------ATERF1(2)                          --------->ATERF1(1)                          --------->DEAR4(2)           ===============================HOX2a_HOX2a           <------ZmHOX2a(1)<---------ATERF1(1)           ==============================HOX2a_HOX2a       ---------->DOF2    --------->RAP2.6(1)     ----------->HVH21    --------->ORA47(2) =================HOX2a_HOX2a--------->ATERF1(1) ---->ZmHOX2a(2)          --------->ERF1 ------>GLK1(1)           --------->RAP2.3(1)                    --------->ARR14(2) =================HOX2a_HOX2a--------->RAP2.3(1)                 <---------ARR14(2) ----ZmHOX2a(2)          --------->LBD16                        <-------GAMYB ----->ARR14(2)          <---------ATERF1(1)                   <---------MYB46(3) ------ARR11(3)          <---------At4g35610                   <---------DEAR3(2) ------ARR14(2)          ------>NtERF2                        <---------DEAR3(1) ----->ARR11(3)          --------->At4g35610                  <---------DREB2C(2) --------ARR10           --------->ABI4(1)                    <---------ANAC58 --At4g35610            --------->ANAC46               --------->ZAT14 ------ARR11(1)         --------->DEAR3(1)<---------LBD16     <---------ANAC58 -----ARR14(1)  --------->TOE2(3)<---------ARR14(2)    <---------ZAT14                             >> ------>HSFB2a(1)      <---------LBD16    ------>ZmHOX2a(1) ------------>AtMYB77                >>>>> -----CCA1(2) <-------TEIL--------->RRTF1(1)      <---------YAB1--------->ATERF1(1)          >>>>>>>>   atcttctctgaaaggattcattaactccgccgccggatccagtcctcgggttatcagagaactggcggttcccataagtattcgaaaccctagaagaaga  20147700                                            --------->AGP1                                     ------                                            --------->ARR14(2)                                -------                                            <---------ARR11(3)                               <-------                                            <---------ARR14(2)                              ------>MYB46(1)                                            --------->ARR11(3)                           ------------                                            <---------ARR14(3)                           --------->MYB46(3)                                            --------->ARR14(3)                          ------->TEIL                             <---------ANAC46                                      --------->MYB52(1) >>>>>>>TBF1                 <---------ANAC58 ------>ZmHOX2a(2)                  *TSS<---------MYB52(2) >>>>TBF1              <-------TEIL       ----------->ARR10               --------->GLK1(2) ------>MYB83 >TBF1    --------->ICU4     <---------ANAC58<------ZmHOX2a(2)           <---------GLK1(2) --------->WOX13(1)   agaagaagagccacgattacgacgattcatggcttagagggaacgagatcttcttccctcccaagtcccaaaccagactctgaagaaacgaaccaatcaa  20147800                                                                                    --------->LBD16                                                                                   ------->GAMYB                                                                                 --------->MYB52(1)                                                      --------->ZAT14          ----------->HVH21                                                      <---------ZAT18         --------->ATERF1(1)                                                    --------->ZAT14           <------NtERF2                                                  --------------->AtSPL3     --------->RAP2.6(2)                                                 --------->SPL7              <---------ATERF1(1)                                                 --------->ZAT14             <---------RAP2.3(1)                                                 <-------TEIL                ------>NtERF2                                                 <---------ZAT14            --------->ATERF1(2)                                              --------->LBD16               <---------DEAR3(1)        ------>MYB83                      --------->ARR14(2)                <---------ANAC46 --------      <---------MYB59                    ------>MYB46(1)                    <---------ATERF1(2)     < <-----------HVH21                    ----------------->AG          <---------AHL20(2)       <------- ---->DOF2            <---------KAN4(2)  ------>MYB83 <---------ZAT14      --------->RAP2.6(3)    <-- -->YAB1------>MYB46(1)               ----------------->AGL1       --------->AHL20(2)       <-------- --ATHB12    <---------YAB1  --------->LBD16<---------LBD16        <---------AHL20(2)       <-------- >CBF <---------MYB46(2)   <---------LBD16<---------ARR14(2) <---------At4g35610 -------->P ---------   agctgttaccgaactattatttggaataaaccggaagagaaccaaatccggtacagtactctcagcgaattaaatctggcggcaaccgggtcaatttaat  20147900                       --------->ARR14(2)      --------->ARR14(2)      <---------ARR14(2) ->AHL20(2)      <---------ZAT18                                            <<<<<<<ZML2 -----------GT1  --------->ZAT18                                         --------->HSFB2a(2)   <----- --AHL20(2)  --------------->AtSPL8                                      <---------HSFB2a(2)   ------ ---------GT1<---------------AtSPL8                                   --------->GLK1(2)       <------ -AHL20(2)  <---------ANAC58      --------->HSFB2a(2)                <---------GLK1(2)        ------- -AHL20(1)  <---------ANAC58      <---------HSFB2a(2)          --------->ANAC58        --------->GLK1(1) >AHL20(2)  <---------ANAC46<---------AtLEC2     --------->YAB1--------->ANAC58    <-----------GT1<--   ttacaccggttctgacttgtacacaaatttgcatttctacaaatgcagcattcaaaattcaactcaagtaagaatctagaacatttcacatttccctaca  20148000                                                                       <---------GLK1(2)                                                                       <---------ARR14(2)                                                                       --------->ARR11(3)                                                               <---------ARR14(2)--------->AHL20(2) ----ALFIN1                                                    --------->ARR14(2)<---------AHL20(2) --->REM1(1)                                                 --------->LBD16 <----------DOF2    <---- ---ZAT14                             <---------TOE2(3)    <---------LBD16<-----------GT1     ------>MYB83 -->ZAT14            <---------HSFB2a(2)                <----------DOF2--------->ARR14(2)     ------>MYB46(1) --------DOF2        --------->HSFB2a(2)             <-----------GT1   <---------ARR11(3)   <--------   ctttgtaatttacatatatagttttggaaaatttgattttaagttttgttttgtttttctttccggttttgcagattttctttttaaatcgataccaaat  20148100                  <------MYB46(1)                  <------MYB83                 <---------AtMYB61         <---------ARR14(2)      <---------ANAC58                                                     --------->ARR14(2)      <---------ANAC58                                               <---------ARR14(2)      <---------ANAC46<----------DOF2                              <---------YAB1          <---------  <---------DAG2 --------->MYB59         <---------ARR14(2)      --------->YAB1      ---------->ID1 -----ATHB12   <---------MYB52(1)        --------->ARR14(2)     --------->ICU4  <---------MYB52(1) -MYB59  --------->ARR14(2)              --------->ARR11(3) <---------ZAT18<---------ARR14(2)  ------   caaacctttcgtatacggtttggtcttttttttttgggaagaatatatggtttagtcatttgtgcaattacgattcggttctgttttgtttttttacaaa  20148200                            <---------ATHB12                          <---------GLK1(1)               <---------AHL20(2)              --------->AHL20(1)              <---------AHL20(1)                                                                    -              --------->ARR11(3)                                                                -----              <---------ARR11(3)                                                        <------------             --------->CCA1(2)     <---------YAB1                                   <---------ALFIN1- --GT1    --------->MYB59 --------->GLK1(1)                                      <-----------GT1----- --->ANAC46 --------->ARR11(3)   --------->YAB1                   <---------ZAT6<-----------GT1 -----   caatagtctagttagatatatttgaaggaaatcaattttgattttgtcatttgagcatttcatttttggtgttattctattttttcccacccctatacag  20148300  Previous    Next  AGI:  At3g54380.1    Description:  SAC3/GANP family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G06290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18331.1); contains InterPro domain SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062) Range:  from: 20144871    to: 20147781    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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