Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->SPL7                                                ---                                  <---------SPL7   <---------ZAT14                                <--                                --------------->AtSPL3                                            <--           --------->YAB1       --------------->AtSPL8                                            --- ---------TOE2(3)             <---------ARR14(2)   --------->ZAT18  <---------At4g35610           --- ------->DOF2          ---------->DOF2    --------->DAG2            --------->At4g35610         <---- ---->GT1 XXXXXXXXXXXXXXXXXXXX>MIR829.2  ---------->DOF2  --------->ZAT14   --------->AtMYB61  <----- --TOE2(3)<---------ATHB12    --------->ARR14(2)<---------ZAT6  <----------DOF2---------->DOF2 ------   taaaggaaacaaatcaaaacttgaagaaagcgaaaccgtaccaaaaagcagtgtgaacagagaactctttagcagagaccataacgccgattgaagcagc  19959900                                                --------->ARR14(2)                                                <---------ARR14(2)                                                ------->TEIL                                                --------->SPL7                                               <---------ALFIN1                                              --------->LBD16                                             --------->HSFB2a(2)                                             --------->LBD16 ------>ZAT2                                --------->HSFB2a(2) -------ZAT2                    --------->AtMYB61 -------At4g35610           ------->GAMYB   <---------HSFB2a(2) -------->RAV1(2)          --------->MYB46(3)--------->ANAC46                  <---------ICU4 ------>At4g35610        --------->MYB52(1) <---------LBD16                    --------->YAB1 -------RAV1(2) <---------ARR14(2)       <---------ARR14(2)                    --------->MYB52(1) ----At4g35610  --------->ARR14(2)  --------->ANAC46    ---------->DOF2   <---------ATHB12         -- --->At4g35610  <---------GLK1(2) <---------ALFIN1    ------>ZmHOX2a(1) --------->WOX13(1)         --   agctgaagcacattgtccgattctcagtaacagaccacacacagttcccggacctcctaaaagcttcttcatttcaatcaataacgactccaatttctct  19960000                                                                                 --------->REM1(1)               <---------ETT(1)                                                 <-------TEIL               <----------ID1                                              --------->DAG2    <------ZmHOX2a(1)            --------->GLK1(2)         <------ZmHOX2a(1)              --------->ANAC58       ---------       --------->LBD16                <----------ID1                 ----------->GT1   <---------ANAC58 ------->HSFB2a(2)              ---------->DOF2                      --------->ANAC58  <---------ANAC58 --------------->AGL1          <------ZmHOX2a(1)         --------->TOE2(3)---------->DOF2 <----------   tcccaaacccagaaattccgacaaaatcagcgaggaaagaggaacaaaatcgaacaaaaccctagttcagcaagtaaaaagctacatttgcttcaggaga  19960100        ----------->GT1       ----------->GT1      --------->LBD16                                                                       ---------     <---------ANAC58                                                                    --------->ANAC46     <---------ANAC58                                                     ------>MYB46(1)--------->LBD16     <---------DEAR3(1)                                                   ------>MYB83  --------->HSFB2a(2)     <---------ANAC46                                         --------->ARR11(3)        <---------HSFB2a(2)    <---------LBD16                          --------->YAB1   <---------ARR14(2)       <---------LBD16    <<<<<<<<<E2Fc  XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B           --------->ARR14(2)  <---------GLK1(2) -    <<<<<<<<<E2Fd --------->ARR11(3)       <---------TOE2(3) <------ZmHOX2a(1) --------->YAB1    <--- >LBD16<------NtERF2              <-------TEIL  <-----------GT1        --------->At4g35610  --------- -RAV1(2)     ---------->DOF2<------ZmHOX2a(1)<---------KAN4(2)    <-----------HVH21   <-------------   aattttggcggggaaaaaaagaaattgcagaggaaattcatagctaagaataaccctataagaggattttgtcacctacaaacagaatttcccgaaacgg  19960200                                                                         --------->ZAT14                                                                  *TSS   --------->ZAT18                                                                 <----------DOF2                                                                 ====================================    <-------TEIL                                                <---------ANAC58   --------->ARR14(1)                                           <---------ANAC58  --------->ARR11(1)                                        <----------DOF2  <---------GLK1(2)        <---------ANAC58                <---------ANAC58 >ARR14(2)                 <---------ANAC46            <---------ANAC58  <---------ZAT14            - ---------->ARR10  <---------HSFC1(2)             <----------DOF2<---------DAG2                    -- ------ANAC46      --------->HSFC1(2)   ----------->HVH21  <---------ANAC58                  -------- >MYB52(1)    --------->At4g35610     <----------DOF2  <---------ANAC58  <---------ZAT18     -------- ----AGL1--------->YAB1    <---------ANAC58      <------------------------ANAC81           --------->CCA1(2)   cttagattcgattataagctaagcttcttccttgtttctcctttgacattctctttttcttgctttgctttttagtggactgagataagtgagataagca  19960300         <---------At4g35610  ==============================bZIP_DOF  <---------ANAC58  ==============================bZIP_DOF  ===========================MYC_MYB                                          --------->ARR14(2)  --------->O2                                                                <---------ARR14(2)  <---------O2  <------------MYB.PH3(2)                                       --------->GLK1(2)  <---------ANAC58                                                           <---------GLK1(2)  <---------TGA1a                                                       <---------MYB52(1)  --------->TGA1a        <------------------------ANAC81               <-------GAMYB ===========bZIP_DOF <----------DOF2                                  <---------MYB46(3) ----->ZmHOX2a(1)    <---------DAG2      <----------DOF2           <------MYB83 ------->TOE2(2)<---------MYB52(2)     ---------->ID1              <------MYB46(1) ->ANAC58--------->At4g35610    <------------------------ANAC81   --------->MYB59       <---------YAB1 ->ANAC58<------NtERF2  <------------------------ANAC81   <------------CBF <---------TOE2(3)   ------   tcctacgtggcagcacaaactaactttttttttttttttttgtctttttttttttttagcgattgtatttggtcgttaagaatctgaagtattatttgtt  19960400                                                 <-----------------AGL1                                            <---------ANAC58                                            <---------ANAC58                       <---------ANAC58                                            <---------AtLEC2                       <---------ANAC58                                          <-----------GT1                          <---------ANAC46           <---------HSFB2a(2)        <----------DOF2                    --------->ANAC55(2) ---->ID1  --------->HSFB2a(2)        <---------DAG2  <-----------RAV1(1)<---------ANAC55(2) --------   gtatttttgagttctaaaaatgtgtatgcaaatgcaatgcctttttgcctgtctctatgtggctattagaccattacataagttttcgtagtaactcgta  19960500                                                                            <---------YAB1                                                             <---------ANAC58              ----------->RAV1(1)                  <---------ANAC55(2)     <---------ARR11(3)             <----------ID1                        <---------ANAC55(1)     --------->ARR11(3)       <---------YAB1       <---------AHL20(2)     --------->ANAC55(2)    --------->YAB1     --------->YAB1--------->MYB52(1)              <---------ANAC46  <------ZmHOX2a(2)              < --->GT1<---------ICU4  ----------->GT1 ----------->RAV1(1)  <---------ANAC58--------->YAB1   <------   aaattgatcaaaattgcaacaaaacagagttaaattgagttccaacacaagttaagtgtttgtgcttatggatcaaatatcatcatcttatcaagtcttt  19960600                                                      -------->P                                                   --------->At4g35610                                --------->At5g28300<---------At4g35610                           <---------ZAT14        --------->ANAC58                --------->At4g35610               --------->ANAC58              <---------ICU4<---------ALFIN1  --------->TOE2(3)           --------->YAB1  --------->ZAT14  ------>MYB46(1)                                         -           <---------ICU4  --------->ZAT18  ------>MYB83                                       <----- <<<<<<<<<<<<<<<<LFY  <---------ATHB12    <---------MYB59                                      ------ ----DOF2 --------->ICU4  >>>>>>>>>>>>>>>>>LFY--------->YAB1  --------------->AtSPL8         <-------   acaaacagtggaatcatcatctcaataactccactgtaattagacctatcttaagctaccctacattgtaccaaaacctgttcttaatagctcagtgctg  19960700                   ----------->GT1                <---------ALFIN1      ------>ZmHOX2a(2)                                                           <---------ARR11(3)     --------->CCA1(2)                                                            --------->ARR11(3)     <------ZmHOX2a(2)                                                            <---------ARR14(2)     --------->ARR14(1)                                                     <---------HSFC1(1)    --------->ARR11(3)                                                   ------>ZmHOX2a(2)    --------->ARR11(1)                                                  --------->GLK1(1)        ----    <---------ARR11(3)                                                  <---------GLK1(1)        ----    --------->ARR14(2)                                                 <---------AGP1            <---    <---------ARR14(2)                                                 ------->TEIL              ----   --------->RVE1(1)--------->At5g28300                 <---------ARR11(3)  --------->HSFB2a(2)  <--- --------->DOF2-------->P                             --------->ANAC58 --------->ARR11(3) --------->ANAC58 ----YAB1      ------>MYB46(1)                        --------->ANAC58 <---------ARR11(3) --------->ANAC58 ----->GT1     ------>MYB83                <-----------ARR10      --------->CCA1(2)--------->CCA1(2)< --At4g35610 --------->AtMYB61             --------->ARR14(2)---------->DOF2<---------HSFB2a(2)  <---   ataaaagatccgataccaacactgtaacaaatccatcgctagtcaaatctactcacaagaactgaaagagatggatctctagaagatatagtaagccaat  19960800  Previous    Next  AGI:  At3g53850.1    Description:  Identical to UPF0497 membrane protein At3g53850 [Arabidopsis Thaliana] (GB:Q945M8;GB:Q9M341); similar to integral membrane protein, putative [Arabidopsis thaliana] (TAIR:AT5G02060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15702.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 19959109    to: 19960266    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g53860.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64768.1) Range:  from: 19960540    to: 19962268    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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