Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ---------->DOF2                                                     <-------                   ----------->GT1                                                <---------MYB52(1)               <---------TOE2(3)                   ---------->DOF2               <-------GAMYB               --------->DAG2              <---------LBD16                  <---------ARR14(2)  <----             --------->CCA1(2)        <---------ARR14(2)                ------>NtERF2   <-----------GT1   ----------->GT1--------->ALFIN1    --------->ARR14(2)               --------->DEAR3(1)<-----------   aaaaatggtagaaagataaggtggagaaaaagaaactgcaaattttctgggtagaaagcagagctagaagacgacgacgataccgttgtttttccttcgt  19717500                         <---------ANAC58                         <---------ANAC58                        <---------At4g35610                  <---------ANAC58                  <---------ANAC46                  <---------ANAC58                  <------MYB46(1)                 <---------AtMYB61                 --------->MYB111(1)                 <---------MYB46(3)             --------->LBD16                   <---------AHL20(2)     <<<<<<<<<TBF1<------MYB83                <---------AHL20(2) <-----------GT1 --------->MYB46(2)           --------->AHL20(1) --TOE1(2) <---------LBD16                    <---------AHL20(1) -----MYB52(1) <---------MYB52(1)             --------->AHL20(2)    --------->ATHB12           <----- -------------ANAC81<---------REM1(1) ----------->GT1              <---------YAB1   <---------AHL20(2)   ttttttcttcttctccggtttggtgtagcttctcttcggtttgtaaaatataatgaaatggttttagttttgatttggatgccggtttaatttggattta  19717600                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(2)                              <---------ANAC58--------->ATHB12                           <---------AHL20(2)                  --------->WOX13(1)      ---------->DOF2   <---------TOE2(3)  <----------DOF2                  --------->YAB1     ----------->GT1     <---------REM1(1)     <---------DAG2   --------->AHL20(2)         <---------ANAC58<------ZmHOX2a(1)        ------>MYB46(1)   --------->AHL20(2)   <---------AHL20(2)       <-----------GT1 <---------TOE2(3)          ------>MYB83<-----------GT1 ------GT1     --------->TOE2(3)   <---------LBD16   <---------WOX13(1)--------->MYB52(1)<---------AHL20(1)   caaaattaaaaatttagcattaatcagttttttcttgtccggtttaaaggattggattgatgaaggaagaaccaaatggagctttttccaatttaatttt  19717700                                                                                                    -                                          <---------GLK1(2)                                         -                                        --------->LBD16                                             <                                      <---------LBD16                                               <                                    --------->ARR14(2)                                              <                                    <---------ARR14(2)                                             --                                  <---------MYB52(2)                                            <----                                 --------->ANAC58                                               -----                                 --------->ANAC58                                     --------->ZAT6<                    <---------GLK1(2)--------->MYB52(1)                               --------->ANAC46        ----------->GT1    ------>ZmHOX2a(1)         ----------->GT1   --------->At4g35610    -------   gaattcgaatttgttaaaacgagattgtccttggcaaggaaccggaatttggaaaatgaaaaaccaagaacacagttgaaagttatccacactagttagg  19717800                              <-------PIF5                              ------->MYC3                              ------->MYC2                              ------->PIF5                              <-------MYC4                              ------->MYC4                                                      -----                              <-------MYC2                                                      -----                              <-------MYC3                                                    <------                              <-------PIF4                                                    -------                              ------->PIF4                                                  ------>MYB83                             ==================================================bZIP_DOF     ------>MYB46(1)  --------->ALFIN1           <---------TGA1a                                               --------->ORA47(1) ------->MYC2                --------->O2                                                 --------->MYB46(3) <-------PIF5                <---------O2                                                 ------->GAMYB <-------MYC4                --------->TGA1a                                              <---------MYB111(2) ------->PIF5                --------->ANAC55(2)                                          <---------MYB55(2) ------->MYC4                <---------ANAC55(2)                                          <---------MYB46(2) <-------MYC3         <-------MYC2                                                        <---------MYB111(1) ------->MYC3         <-------PIF5                                                        --------->DREB2C(2) <-------MYC2         ------->MYC3                                                        --------->DEAR3(1) -------->TGA1a       <-------MYC3                                                        --------->DEAR4(1) -------->O2          ------->MYC2                        <---------ANAC46               --------->DEAR3(2) ---------O2          ------->PIF5                       <------NtERF2                   <------NtERF2 ---------ANAC55(2)  --------->TGA1a                    <---------RAP2.6(3)             ------>NtERF2 ---------TGA1a      --------->O2                       <-----------HVH21               <---------ATERF1(1) ---------->OsbHLH66 <---------O2                       ------>NtERF2   *TSS           <---------ALFIN1 --ZmHOX2a(1)  ------->TEIL<------------OsbHLH66       --------->DEAR3(1)         --------->At4g35610 ------------>PIF3(1)<---------TGA1a                --------->ANAC46    <-----------HVH21--------->MYB46(3) ---------ANAC46     <---------ANAC46         ------>ZmHOX2a(1)----------->GT1    <---------At4g35610 -->MYB59  <---------TOE2(3)------------>OsbHLH66<---------REM1(2)  ---------->DOF2 --------->ANAC46   acacgtggaggctaatgtatttcacgtggacacgtgctcatcactctcctctaaacgccgtcgtgaagtttaaaggtcagagacatcggccaccgaccaa  19717900                             --------->ARR11(3)                             <---------ARR14(2)                             <---------ARR11(3)                             --------->ARR14(2)                  --------->ATHB12               <---------DOF5.7(2)              <---------WRKY38(1)     --------->ANAC58  --------->ATHB12     --------->ANAC58 <---------YAB1                    <---------MYB52(1) --------->ICU4          <- ->MYB46(1)   <---------WRKY45 ------>ZmHOX2a(2)   <-----------GT1         <---------YAB1      ------ ->MYB83  --------->DAG2    <---------CCA1(2) <----------DOF2  --------->YAB1                  ------ ---MYB59---------->DOF2 <---------WOX13(1)<---------YAB1   ------>ZmHOX2a(1)                -------- -->AtMYB61   <---------WRKY12 ====================================HOX2a_HOX2a ----------->GT1 ------   atcagacaaggaaaagtcaacgatttgattggatcttcttcacttatgctttaaaaccgttcctgtaataaactgtgaagattgtaagaagattaacacg  19718000 --------ATHB12                                              <---------TOE2(3) --->ANAC46                                      --------->ZAT14                                  --- --->ANAC58                        --------->CCA1(2)       ---------->DOF2                        --- ->ZAT6              <----------DOF2             <---------ZAT14 --------->ANAC58                 --- --->ANAC58      --------->WRKY38(1)          <---------ANAC46   --------->ANAC58      <-------GAMYB   aatcaagaacatcgaactgttgactttagacagagagagacggagatggagtttagtgagttaaaggaagcaatagagaagatagagctcgttgatgctc  19718100                                                                  <------NtERF2                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                               <------NtERF2                                                              <---------RAP2.3(1)                                                              --------->LBD16                                                              ------>NtERF2 --------->TOE2(3)                                                              <---------ATERF1(1)                                                             <---------ATERF1(2)                                                             --------->DEAR3(1)                                                             --------->ATERF1(2)                                                            --------->ATERF1(1)                                                            <---------LBD16 --------->TOE1(3)                                              <----------DOF2<---------DEAR3(1)                                             <---------HSFB2a(1)<---------DEAR3(1)                                             --------->HSFC1(2)--------->ATERF1(1)                                       <---------At4g35610 <---------ATERF1(1)    --------->ANAC46                   --------->At4g35610 <---------At4g35610  --------->ANAC58                  <-------TEIL           --------->At4g35610  --------->ANAC58                 <---------MYB52(1)      ------>NtERF2 <-----------GT1  --------->ANAC46               <---------ANAC58          --------->MYB52(1) ------>ANAC46                   <---------ANAC58    --------->LBD16  <----------DOF2 ------>ANAC58              <----------DOF2  --------->HSFB2a(1)----------->HVH21                 --- ------>ANAC58             <---------ICU4    <---------HSFC1(2)--------->RAP2.3(1)   ------>ZmHOX2a(1)   acgcacacaacattgtctctcttgactcatcttttccgttcatcggaactttctccgaggctgccggcgacgctttaaccttcgctcctcattctctctc  19718200                                                                               --------->TOE1(3)                                                                              <---------At4g35610                                                                  <---------TOE2(3)                                                                <---------AHL20(2)                                                                --------->AHL20(2)                                                            =========================================                                                            <---------------AGL15         <---------MYB59                                                         --------->GLK1(2)    --------->At4g35610                                                        <---------GLK1(2)  <---------MYB52(1)         --------->ANAC46                               <---------ARR14(2) --------->DOF5.7(2)      <-------TEIL                                   --------->YAB1 --------->YAB1       ------------     --------->CCA1(2)                      <---------ANAC58--------------->AGL15 ---------->DOF2  <---------TOE2(3)                         <---------ANAC58<---------YAB1--------->TOE2(3) --->ZmHOX2a(1)                       --------->MYB52(2)--------->ARR14(2)--------->TOE1(3)------>ZmHOX2a(1)   cttcaaggtacacgacgataccaagtgtttttgctctagttagttttcgtttgaatcagattctaattaatgaaaacgttagcttaaagtttcctaatta  19718300                                                            <---------GLK1(2)                                                           <------ZmHOX2a(1)                              <---------ZAT6      <---------ANAC58                             >>>>>>>>>TAC1        <---------ANAC58                          <---------ANAC46        <-----------------AGL1                          <---------ANAC58      <<<<<<<<<<WRKY63          <------MYB46(1) <-------GAMYB   ---------->DOF2        <---------ANAC58 <---------ARR11(3)    <---------ANAC46------->TEIL ======MADS_MADS    <---------TOE2(3)      --------->ARR11(3)--------->GLK1(2)<---------YAB1    <---- ----->AG          ---------->DOF2     ---------->DOF2   <---------TOE2(3)<------MYB83   <---------MYB46(3)   gtctcaaaagtattagttaactaaagtttcgagtgttactcaaaagatgttgacttgtttaggaatctcgtgaagttggtatgaatgtttttggttgtat  19718400  Previous    Next  AGI:  At3g53180.1    Description:  glutamate-ammonia ligase. similar to hypothetical protein OsI_032736 [Oryza sativa (indica cultivar-group)] (GB:EAY78777.1); similar to glutamine synthetase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABB47747.2); similar to hypothetical protein OsJ_030517 [Oryza sativa (japonica cultivar-group)] (GB:EAZ16308.1); contains InterPro domain Glutamine synthetase, beta-Grasp; (InterPro:IPR008147); contains InterPro domain Glutamine synthetase, catalytic region; (InterPro:IPR008146); contains InterPro domain Glutamine synthetase/guanido kinase, catalytic region; (InterPro:IPR014746); contains InterPro domain Amidohydrolase 2; Range:  from: 19717872    to: 19722417    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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