Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------ATHB12                                                                                ------>MYB46(1)                                                                      <----------DOF2                        ------>ZmHOX2a(1)                          --------->ARR11(3) ------>TEIL <---------ATHB12                                      <---------ARR11(1) ----ANAC55(1)<---------ICU4                                      <---------CCA1(2) ----ANAC46  --------->ICU4          <-----------GT1    --------->AtMYB61  <-----------GT1 ---------- >GT1      --------->YAB1  <---------ZAT6   <-----------GT1   --------->TOE2(3) ------>MYB83   tgtatccatgctctaataatgtattcctagtgtatgaaataactattcacaaaataaaccaaaacatcaaatcttttttaccaatcttttgaatagttat  19598400                                                                                       ==============                                                                                    <-----------GT1                                                                                  <---------HSFC1(2)                                                                                  <---------HSFB2a(1)                                                                                  --------->HSFB2a(1)                                                                                  --------->HSFC1(2)                                                                     <---------At4g35610                                                                     --------->At4g35610                                                                   <-----------RAV1(2) <----------DOF2                                                        --------->DAG2           ------->TEIL                                                       ---------->DOF2        --------->ANAC58      <      <---------At4g35610       ----------->GT1     --------->At4g35610       --------->ANAC58     <- ->GT1--------->At4g35610 <---------TOE2(3)<---------ALFIN1 <-----------HVH21 --------->ANAC46     <-   ttcacttgagctctgatcaacattttttatggtatggtaaaaaatccacctctcagataaagcatcacatcagatgaaacacgaattttctttttcagta  19598500                       ------->MYC3                       ------->MYC2                                                                 -                       ------->MYC4                                                              ----                       <-------MYC4                                                              <---                       <-------MYC3                                                            ------                       <-------MYC2                                                           -------                      <---------TGA1a                                                         <------                      --------->TGA1a                                                      --------->ARR14(2)                      <---------O2                                                         <---------ARR14(2)                      <---------ANAC55(2)                                                <-------MYC3                    <---------ALFIN1                                                     ------->MYC3   <---------At4g35610--------->ANAC55(2)                                               --------->O2-   --------->At4g35610--------->O2--------->ARR14(2)        --------------->AtSPL8 --------->ARR14(2) ===============================bZIP_DOF        --------->GLK1(2)                  <---------ARR14(2) ---------MYB52(1)  <------------OsbHLH66      <---------GLK1(2)                --------->ANAC55(2) < ----------HVH21  <---------ALFIN1--------->ZAT14       <---------AHL20(2)    <-----------GT1<------- ----------TGA1  <---------ZAT18 <---------MYB52(1)<---------YAB1       <----------DOF2 --------->ANAC46   ccgtcagattaaaagattgcccacacgtgtttcccgtttactcttcttagattcttattcaatttgtacaaactctttttttacatatccacgtttccgg  19598600                                                             <---------AHL20(2)                                                             --------->AHL20(2)                                                             --------->AHL20(1)                                                             <---------AHL20(1)                                                          <---------ICU4                                                         --------->AHL20(2)    ---------->DOF2                                      <---------AHL20(2) -------->ANAC58                                         <---------ATHB51 ----->ARR14(2)                                          --------->ICU4 ------ARR14(2)                                         <---------AHL20(1)                         -- --->LBD16                     <-----------GT1         --------->YAB1                              <- -->HSFB2a(2)             ----------->GT1            <---------AHL20(2)                           <-- ---HSFB2a(2)           ----------->GT1              --------->AHL20(2)        --------->YAB1     --- -------->ANAC58       --------->DAG2               --------->AHL20(2)        <-------TEIL     ------ ----------ID1        ---------->DOF2          ------>ZmHOX2a(1)  <-----------GT1            -------- --LBD16         --------->AHL20(2)           --------->TOE2(3)  --------->AHL20(2) ------->TEIL<----   aaacgacaaagaagaacaattcaataaagtgataaacccttctccattcctaaattaaaataattaattaactcttaacattcatgaatctctaatccta  19598700         --------->ATHB51         <---------ICU4         <--------ATHB1         <---------AHL20(2)         --------->AHL20(2)      --------->YAB1     --------->AHL20(2) <---------YAB1 ------->YAB1               <---------ARR11(3)                                                  ----- ----------GT1              --------->ARR11(3)                                                  ----- -------ATHB12            <---------AHL20(2)   ------>ZmHOX2a(1)                                ----- ------>MYB46(3)   <---------MYB52(1)          <---------------AGL15              <---------ZAT18 >ZmHOX2a(1)  <-----------GT1                 --------->TOE1(3)                   <---------ZAT14 ->YAB1 --------->ICU4   --------->AHL20(2)   --------->TOE2(3)                   --------->ZAT14  *TSS -----ICU4  <---------AHL20(2)    <----------DOF2                         <-----------GT1 <----------   atcaccattaataatttatccattagattaaatcttctttcttctcttccttaacttagaagactcttaaatctaataactctgttcacttccttcacac  19598800                                                                    <-----------GT1                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                              <---------ANAC55(2)                                                              --------->ANAC55(2)                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        --------->ARR11(3)                    <---------TOE1(2)                   <---------ARR11(3)                 <---------ANAC46                       <---------ARR14(2)           --------->DAG2                               <-----------ARR10 --------->YAB1  <xxxxxxxxxxxxxxxxxxsmallRNA(si3)       --------->ARR14(2) ---->ANAC58    <-------TEIL                           <---------CCA1(2) ---->ANAC46 <---------HSFC1(2)                        <---------ARR14(1) ---->ANAC58 --------->HSFC1(2)              >>>>>>>ZML2<---------AGP1 -HVH21   ---------->DOF2         <----------DOF2    <---------ANAC46   --------->ANAC46   gaatcaaaaacaaaaagcttcgtacatttcgcctagctttcttcgttctagggtttcggatcttacttaattacccaaaacccttgaatccattactctg  19598900                                                                               <---------ANAC58                                                                               <---------ANAC58                                        <---------ANAC58                     ------->TEIL                  <----------DOF2       <---------ANAC46                <---------ICU4                 <---------DAG2    --------->ATHB12                    <---------ATHB12       <---------CCA1(2)         <---------ATHB12      <---------TOE2(3)--------->YAB1              <  --------->At4g35610      <----------DOF2           ---------->DOF2   --------->ICU4     <----------  <---------At4g35610 <-----------GT1   <---------ANAC58      --------->ARR11(3)      <----------DOF2   tgtgagcttaaatctcttaccttttatcactttcaatcgattgggtattaagttgtaaaggaaggaacttggaatcatgaagcttgggcttttcactctc  19599000                                                                     <---------ANAC55(2)                                                                     --------->ANAC55(2)                                                                     ----------->RAV1(2)                                                                     <---------At4g35610                                                                     --------->At4g35610                                      <---------MYB46(3)        --------->TGA2(1)                                  <-------TEIL                  --------->REM1(1)                  >>                                 --------->ARR14(1)             <---------TGA2(1)              ------                ------->TEIL    <---------GLK1(2)               <---------bZIP60(1)         <--------           ------>ZmHOX2a(2)    <---------ARR14(2)              --------->bZIP60(1)       <----------         --------->ARR11(3)     --------->ARR11(1)             <-------TEIL          --------->ARR11(3)         <---------ARR11(3)     --------->ARR14(2)            <-----------GT1        <---------ARR11(3) ---------CCA1(2)             ----------->ARR10          ---------->DOF2         ---------->DOF2   << -GT1<---------At4g35610     <--------P               --------->TOE2(3)        <------ZmHOX2a(2)-----   tcgtttcttctgatcttgaatctagcaatgggtagattcgttgttgagaagaacaatctcaaagttacatcacctgattcgatcaaaggtatttacgaat  19599100                                                 --------->DEAR3(1)                                                <------NtERF2                                                --------->DEAR3(2)                                                --------->ATERF1(1)                                               ------>NtERF2                                              <---------ALFIN1                                             <------NtERF2                                             --------->ATERF1(1)                  --------->ARR14(2)         <---------ABI4(2)                  <---------ARR14(2)        <---------ATERF1(1)     --------->YAB1             <---------MYB46(3)<-----------HVH21  --------------------->WRI1    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  ---------->DOF2 >>>>>>>>>>>>>>>LFY   <---------------AGL15 <---------RAP2.3(1)           ---------->DOF2 ->TEIL          --------->GLK1(1)          <---------ORA47(2)         --------->YAB1 -YAB1      <---------LBD16    --------->ALFIN1<---------ATERF1(1)    <---------ATHB12 -GT1----------->GT1  ------>ZmHOX2a(1)     <---------DEAR3(2)      --------->WOX13(1) <<<<<<<<<<<<<<<LFY  --------->TOE2(3)     <---------DEAR3(1)------>ZmHOX2a(1)<---------ANAC58 ---->HSFB2a(1)  <---------GLK1(1)   <----------DOF2        --------->TOE2(3) <---------ANAC58   gtgccattggtaatttcggagttcctcaatacggtggtactttagtcggcaccgtcgtctatcctaaatccaatcagaaagcttgtaaaagctactccga  19599200                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                               ------>ZmHOX2a(1)                    <----------DOF2<-                                               ===============HOX2a_HOX2a          <---------DAG2<---                                       <----------DOF2                       --------------->AtSPL8--          ------>ZmHOX2a(1)          ------>MYB83                           <---------ARR11(3)   <---    <---------ARR11(3)               ------>MYB46(1)            <-------TEIL--------->ARR11(3)   ----    --------->ARR11(3)             <---------MYB59     ------>ZmHOX2a(2)---------->DOF2     <--------   <---------GLK1(1)  ----------->RAV1(2)   ---------->ID1   <---------MYB46(3) <-----------GT1  <---   tttcgatatctccttcaaatccaaacctggacgattaccaacttttgtccttatcgatcgtggaggttcgatttcaaagttcttacctttttagttgttc  19599300  Previous    Next  AGI:  At3g52850.1    Description:  ATELP/ATELP1/BP-80/BP80/BP80B/VSR-1/VSR1 (ARABIDOPSIS THALIANA EPIDERMAL GROWTH FACTOR RECEPTOR-LIKE PROTEIN); amino-terminal vacuolar sorting propeptide binding. Identical to Vacuolar-sorting receptor 1 precursor (VSR1) [Arabidopsis Thaliana] (GB:P93026;GB:P94037;GB:Q94AC0); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.2); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G30290.1); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.1); similar to vacuolar sorting receptor protein PV72-like protein [Solanum tuberosum] (GB:ABC01915.1); si Range:  from: 19598799    to: 19602925    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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