Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->MYB52(1)                                                                                  ----------->HVH21                                                                                 --------->ATERF1(1)                                                                                <---------ATERF1(1)                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                             <---------ATERF1(1)                                                                             --------->LBD16                                                                            <---------DEAR3(1)                                                                            <---------ANAC46                                                                           <------NtERF2                                                                           <---------LBD16                                                                          <---------ERF1                                                                          <---------RRTF1(1)                                             --------->ALFIN1             ------>NtERF2                                        <---------DEAR3(1)                <---------RAP2.3(1)                                        --------->ETT(1)                 <---------RAP2.6(2)                                      <XXXXXXXXXXXXXXXXXXXXXMIR472       <---------RRTF1(2)                                     <------MYB46(1)                     <---------RAP2.3(3)                                    <---------AtMYB61                    <---------RAP2.3(2)                                   <---------WOX13(1)                    --------->ATERF1(2)       <-                                 --------->ATHB12                        <---------RRTF1(3)        --    --------->MYB52(1)           <---------MYB46(3)                      <---------ATERF1(2)       --   ----------->HVH21            <---------YAB1                           <---------DEAR3(1)      ---- >ARR14(2)                <----------DOF2 <------NtERF2               ----------->HVH21     <------ZmHOX2a(1) -ARR14(2)         --------->MYB52(1)<------MYB83                <--------P--------->ATERF1(1)  -----   gcgagacgacggagagagaggtaagggtcttttggtgattggtcggagtgggagaagggagagagaggtagtttgacggcggagacgacggagaggaaga  19478000        >>>>>>>>>TBF1     >>>>>>>>>TBF1 <------ZmHOX2a(1)                  <---------ANAC58   <----------DOF2 --------TOE2(3)                    <---------ANAC46  <---------ANAC58                       -------- ------->ANAC58             --------->YAB1       --------->ATHB12<---------ANAC55(2)     <----------ID1 ------->ANAC58       --------->ANAC58         <---------WOX13(1)--------->ANAC55(2)---------->DOF2 ----->CCA1(2)        --------->ANAC58--------->ALFIN1<---------ANAC46        <------ZmHOX2a(1) ---->ARR11(3) --------->CCA1(2)    <---------ANAC58  <---------ANAC58      ------------------------>ANAC81   taaggaagaagaagaagatagaagaagccattgtaatggtgtgtttgggattgatggcttatgggttaagtaagtgagaaggagaagaaagaagacaaag  19478100                                                                           ----------->GT1                                                                      <--------ATHB1                                                                      <---------ICU4                                                                      <---------AHL20(2)                                                                      --------->ATHB51                                                                     --------->ICU4               --------->YAB1          <<<<<<<<<TBF1<---------AHL20(2)--------->AHL20(2)        <----       --------->ALFIN1  ------>ZmHOX2a(2)      --------->YAB1       <---------YAB1             <----   ---------->DOF2      <---------GLK1(1)    <----------DOF2    --------->YAB1<---------AHL20(2)<---- -->DOF2     --------->GLK1(2)    <----------DOF2  --------->YAB1  --------->YAB1             <------   aagtggaaagtggagaatcatgttcgatctctgtgactttcttcttccttttataaaaatgttttagaataataatttagttaaatgtgtctgtttttac  19478200                                       <---------ANAC58                                       <---------ANAC46        <---------YAB1                 <---------ANAC58      <---------ICU4           --------->ARR11(3)                        <-------TEIL -----ANAC58                   <---------ARR11(3)                <---------DDF1 -----ANAC46       --------------->AGL15                        <---------ETT(2)                 <--- -----ANAC58       <---------------AGL15            --------->ICU4   <---------YAB1           ------- -----GT1<-----------GT1    --------->AHL20(2) ----------->GT1  --------->ETT(2)   <---------ETT(2)   ttggaaacttattactagttactactataagtaaatcttatacgtggaaatgtaatttttgtttagtcgacatgatacatctctgtctacgtagacatga  19478300                                                                                         <-----------GT1                                                                                     <---------YAB1                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)         --------->ANAC58                               <---------ANAC46           --------->YAB1 ------YAB1               ------->TEIL            --------->ICU4                 <---------TOE2(3) -->ICU4 --------->ANAC58<---------CCA1(2)   --------->YAB1     *TSS           <---------AHL20(2)   tgatacagagccagccaatacattcttgtatctatagaaaatgccaatggtattgattttgtggaggtatactatatgtgtttaatgatatttgctatac  19478400                       --------->AHL20(2)               --------->ATHB12               -------->HAHB4               --------->YAB1--------->ANAC46              <---------YAB1 --------->ANAC58            <---------ICU4   --------->ANAC58           --------->ICU4  <-----------GT1           <---------------AGL15           --------------->AGL15                                <-------GAMYB          ----------------->AGL3              ---------->DOF2  <---------ANAC46          <-----------------AGL2  --------->AtLEC2          <-----------RAV1(1)   <<<<<<<<<<WRKY63 <------ZmHOX2a(1)    ----------->GT1<---------ANAC58                       ------ ----------->GT1----------------------->TaNAC69(2)      <---------ANAC58       <---------MYB52(2)   aaatagtcaaatactaattataggattatttacgccattcaagttgaaaaaagagcatgcttatgtcgttgaaaaattccaactaaacaaataaaactaa  19478500                                                   --------->ATHB12                                                  <---------YAB1                                                  --------->ICU4                                                --------->ATHB12                                               --------->ICU4                                               <---------YAB1                                      --------->AHL20(2)                          ------>MYB83<---------AHL20(1)                          ------>MYB46(1)<---------WOX13(1)                <---------YAB1        <---------AHL20(2)             --------->ICU4           <---------GLK1(1)          --------->AHL20(1)             <---------YAB1           --------->GLK1(1)       --------->WOX13(1)    <---------WOX13(1)              --------->TOE2(3) --------->GLK1(2)      <---------MYB59--------->ATHB12--------->ATHB12  ------>ZmHOX2a(2)  <-------- --->MYB52(1) <-----------GT1<----------DOF2 <---------AtLEC2   --------->O2             --------->YAB1   gagaatttgtgggaaatcaccatagacctatctttttcaattaattggcatgattattgattggccatgtgatgatcgctcaaggggctaaccatattga  19478600                            --------->ARR11(3)                            <---------ARR11(1)                            <-----------ARR10                            <---------ARR14(2)                   <---------YAB1          <---------ARR14(2)                --------->AHL20(2)         --------->ARR14(2)                --------->ICU4    --------->HSFB2a(2)      --------->MYB52(2)    <---------ANAC55(2)     <---------ARR11(3)          <----------DOF2    --------->ANAC55(2)     --------->ARR14(2)         <---------ANAC58 <---------ATHB12<---------AHL20(2)   -------->P       <---------ANAC58                  <------ZmHOX2a(1) -ICU4----------->HVH21    <---------CCA1(2)  <-----------GT1                          <---------TOE2(3)   caaatcatgtgatgcatatttattaatccatatcttctctaaccagatttacaagttgctttagttgaatacattttgtcagtgtttttgaggaatggag  19478700                                                          <---------YAB1                      <------                                                      ------->TEIL                            -------                                                 <---------ICU4                               <------                                                 --------->YAB1                --------->ATHB12                                <-----------GT1 --------->ICU4        <---------YAB1    <-----------GT1  <-----------GT1           --------->KAN4(1)   <---------ATHB12   --------->ICU4  ----------->GT1 <-----------GT1          <---------GLK1(2)--------->ANAC55(2)   ------->TEIL ----------->HVH21   ttttttcccgtccaagttccatacttcagattattcaccagttttaagtaatcatgtactctgaatgtacttatgagggaatgactggtttaacaatatt  19478800                           --------->AHL20(1)                           <---------AHL20(1)                          <---------AHL20(2)                        <---------AHL20(2)                        --------->AHL20(2)                       --------->YAB1                      --------->AHL20(2)                        <---------YAB1                      <---------AHL20(2)                       --------->ARR11(3)                    <---------AHL20(2)                         <---------ARR11(3)                    --------->AHL20(2)                   <---------HSFB2a(2)                  <---------AHL20(2)                     --------->HSFB2a(2)                  --------->AHL20(2)                   --------->CCA1(2)                <---------AHL20(2)                     <------ZmHOX2a(2)                --------->AHL20(2)                    --------->AGP1              --------->AHL20(2)                      --------->ARR11(3)          --------->AHL20(2)                 --------->YAB1 <---------GLK1(2)          <---------AHL20(2)<---------AHL20(2)        <---------ARR11(3)              --------->ANAC46 ---AHL20(1)  <---------AHL20(2)            <---------YAB1--------->LBD16           <-----------GT1 -->AHL20(1)<---------AHL20(2)  <---------AHL20(2)    --------->ARR14(2)        --------->AHL20(2) <- ---ARR11(3)--------->AHL20(2)<---------AHL20(2)      <---------ARR14(2)   <-------TEIL         <----   tttcaactgtatatatatatatatatatatatatttttttttttttttcatagtaagatccagaatatcatatgagattcatatatatactccatgttct  19478900  Previous    Next  AGI:  At3g52500.1    Description:  aspartyl protease family protein. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT4G16563.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67405.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase aspartic, active site; (InterPro:IPR001969); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 19476477    to: 19478364    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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