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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
YAB1
<---------
YAB1
----------->
GT1
<---------
TOE1(3)
-------
YAB1
<----------
DOF2
<---------
TOE2(3)
----------->
GT1
------>
ICU4
<-----------
GT1
<----------
DOF2
<----------
DOF2
<---------
YAB1
<----
--
ZAT6
------->
TEIL
<----------
DOF2
<---------
AHL20(2)
<---------
YAB1
<-----------
GT1
ataattcatgaatttcacattctttctttttcttttctatttagaaatctatttattctttaagcttgttattatagttctgttaatacagttcaaatta
19417600
----------->
GT1
--------->
ICU4
<---------
AHL20(1)
--------->
AHL20(1)
---------->
DOF2
<---------
AHL20(2)
--------->
ZAT18
<---
--------->
WOX13(1)
<---------
HSFB2a(1)
<---------
MYB52(1)
<----------
DOF2
<----------
TaMYB80
--------->
AHL20(2)
--------->
HSFB2a(1)
<-------
GAMYB
-------
GT1
<---------
ZAT18
<---------
AHL20(2)
---------->
DOF2
--------->
ZAT6
<-----
tcaactttcaatagtgtccacatattcccaagggtattcaattaattagtaatatgttcaaagaaagtccccaaaagttttaagactccgttatcaagac
19417700
---------->
DOF2
--------->
TOE2(3)
<----------
DOF2
<---------
ARR11(3)
<-------
TEIL
<-----------
GT1
<------
ZmHOX2a(1)
--------->
ARR11(3)
--------->
DAG2
----------->
GT1
<---------
ARR11(3)
---------->
DOF2
<---------
ARR11(3)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
TOE1(3)
<---------------
AGL15
<---------
AHL20(1)
------
MYB59
--------->
ARR11(3)
----------------->
AGL1
---------->
DOF2
<----------
DOF2
----
----
ARR11(3)
<---------
YAB1
---------->
DOF2
--------------->
AGL15
--------->
AHL20(1)
--------->
GLK1(2)
ctaaatatatacattatctttaaagaagcttaaagttccaaacttggtctattaaaagaaaaagttatggcaatattttgactttgggaggagaaactga
19417800
-----
-----
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<--------
<--------
--------->
MYB52(1)
---------
<---------
MYB52(2)
---------
--------->
ZAT14
<--------
<----------
DOF2
<---------
ZAT14
<--------
<---------
ICU4
<---------
ARR14(2)
---------->
DOF2
<---------
ATHB12
--------->
ARR14(2)
------>
ZmHOX2a(1)
---------
------>
MYB46(1)
<---------
GLK1(2)
============================
HOX2a_HOX2a
------>
MYB83
--------->
ARR11(3)
<---------
MYB52(2)
===========================
HOX2a_HOX2a
------>
DOF2
<---------
ARR11(3)
------------------------>
ANAC81
<----------
DOF2
--------->
RVE1(1)
aaagaccaatcttttcttctattgtagatactctgaactaacagaaacgaacaatagagaaacaaatattctttcctctttttaatgcttaaaagatcct
19417900
<----------
DOF2
--------->
ALFIN1
<------
NtERF2
<---------
ANAC58
<---------
MYB52(1)
------>
NtERF2
<---------
ANAC58
<-------
GAMYB
<---------
RAP2.6(2)
<---------
ANAC46
------>
HVH21
--------->
ATERF1(2)
--------->
LBD16
->
ZmHOX2a(1)
<---------
DEAR3(1)
--------->
ANAC58
-
ARR14(3)
<---------
ATERF1(2)
--------->
ANAC46
-
ARR14(2)
<---------
MYB46(3)
<---------
LBD16
>
ARR14(3)
--------->
MYB55(2)
------->
MYC3
>
ARR14(2)
--------->
ALFIN1
--------->
ALFIN1
<-------
MYC3
-
GLK1(2)
<---------
DAG2
--------->
ATERF1(1)
--------->
ANAC46
-
ARR11(3)
<----------
DOF2
<---------
ABI4(1)
------>
ZmHOX2a(1)
<---------
ALFIN1
>
ARR11(3)
---------->
ID1
--------->
ALFIN1
<---------
ANAC46
<----------
DOF2
--------->
ANAC58
<----
gaccgttgatttttggctttatgggtggatggggcggcattaactacgtggtccttgaactatcgctatacgtccaacacgcggaatagtgtgtgtgagt
19418000
<---------
HSFB2a(2)
<<<<<<<<<
TBF1
<<<<<<<<<
TBF1
<---------
LBD16
<----------
DOF2
------>
ZmHOX2a(1)
<<<<<<<<<
TBF1
<---------
DAG2
--------->
ANAC46
<-----------
GT1
<<<<<<<<<
TBF1
--------->
HSFB2a(2)
<----------
DOF2
<---------
HSFB2a(2)
-----
ZAT6
------>
ZmHOX2a(1)
*
TSS
--------->
LBD16
<-----------
GT1
--------->
HSFB2a(2)
<
gttattctccttctccttcttcttcttct
tcttctccagaaaaaacaaaacttttttcttttctctctcaacttgcagaagaagcgatttacacaag
gtt
19418100
<---------
ANAC58
<---------
ANAC58
<---------
AtLEC2
<----------
DOF2
<---------
ARR14(2)
<---------
YAB1
<---------
GLK1(2)
--------->
ARR14(2)
---------
YAB1
<---------
AHL20(2)
--------->
YAB1
<-----------
HVH21
ttgtgattcttctcacttatatataatcttctgtatgcttggaattggtatcaaaatcgattcttttaatctgtcattgaag
gaactgggtttatacatt
19418200
------>
ZmHOX2a(1)
<---------
At4g35610
<---------------
AtSPL3
--------->
GLK1(2)
--------->
GLK1(2)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
GLK1(2)
--------->
ARR11(3)
--------->
ANAC58
<---------
ARR14(1)
<-----------
GT1
--------->
ANAC58
<---------
GLK1(2)
<----------
DOF2
<
tatctctcaagtcatagaatctgcatttgtcccaagttaagaagagaatctt
gtactgctccttatctatgttttgctctctttaccaattgtttcaatg
19418300
----------->
RAV1(1)
<---------------
AGL15
--------------->
AGL15
<---------
ICU4
----------------->
AGL2
--------->
YAB1
<-----------------
AGL3
-------->
HAHB4
<-
--------->
ARR14(2)
<---------
ATHB51
-------
<---------
ARR14(2)
--------->
YAB1
<------
<---------
ARR11(1)
--------->
AHL20(2)
--------->
AHL20(2)
<--------
--------->
ARR11(3)
<---------
AHL20(2)
<---------
AHL20(2)
<--------
<---------
CCA1(2)
--------->
YAB1
--------->
AHL20(2)
<---------
MYB59
<---------
At4g35610
---------
YAB1
<---------
ARR11(3)
--------->
YAB1
--------->
ICU4
------->
TEIL
<-----------
GT1
--
ttatgaacaaaacccatatctctaaatagcaacaatagtgatttcatttaataatggattttgcctctgtacctatttatatag
taacc
atggagcggct
19418400
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ARR14(2)
--------->
ARR11(3)
------>
ZmHOX2a(2)
<---------
AGP1
====================================
HOX2a_HOX2a
------>
ZmHOX2a(1)
--------->
GLK1(2)
===================
HOX2a_HOX2a
<------
ZmHOX2a(1)
--------
GLK1(1)
<---------
ARR11(3)
<------
MYB46(1)
-->
At4g35610
<---------
YAB1
<------
MYB83
---
At4g35610
--------->
YAB1
--------->
ANAC58
<-
-
DEAR3(1)
================
HOX2a_HOX2a
--------->
ANAC58
<-------
-
RAP2.6(2)
------>
ZmHOX2a(1)
--------->
ARR11(3)
<--------
P
<-----------
GT1
--------->
YAB1
------->
GLK1(1)
--------->
ICU4
--------->
ANAC46
<---------
GLK1(2)
<---------
YAB1
gatttctcatcctcctctcatgatcgtctcagaccttgatcacaccatg
gtaggatctgattcttttaactccctctctgtttgcattttcatagtttat
19418500
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AGI:
At3g52340.1
Description:
SPP2; sucrose-phosphatase. similar to sucrose-phosphatase 1 (SPP1) [Arabidopsis thaliana] (TAIR:AT2G35840.1); similar to sucrose-phosphatase 1 (SPP1) [Arabidopsis thaliana] (TAIR:AT2G35840.2); similar to sucrose phosphate phosphatase [Malus x domestica] (GB:AAS79792.1); contains InterPro domain Sucrose-6-phosphate phosphohydrolase C-terminal (InterPro:IPR013679); contains InterPro domain HAD-superfamily hydrolase, subfamily IIB; (InterPro:IPR006379); contains InterPro domain Sucrose phosphatase, plant and cyanobacteria (InterPro:IPR012847); contains InterPro domain Sucrose-6F-phosphate phosphohydrolase, plant and cyanobacteria (InterPro:IPR00
Range:
from: 19418030
to: 19420313
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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