Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)   --------->ANAC58             <---------ARR11(3)   --------->ANAC46             --------->ARR11(3)   --------->ANAC58             --------->ARR14(2) -------TEIL                    --------->ARR14(3)                   ------->TEIL               ----- -------->ZAT18                 <---------ARR14(3)               <---------------AtSPL8         ----- ---->MYC2                      <---------ARR14(2)               <---------------AtSPL3      <------- -----MYC2              <---------ZAT14                       <---------AHL20(2)   --------->TOE2(3) -----MYC3              --------->ZAT14                      --------->YAB1     <---------CCA1(2) ---->MYC3       --------->YAB1<------ZmHOX2a(1) <---------ICU4  --------------->AtSPL8  <-----------GT1   cgtgcacgaagaaactcaatagtcactgaagtaggatcttgtgcctctgaatcaatacacctataaaaatgtaccaaaacccaaatctaaatttcgattc  19386700                                                                                               ------                                                                                              -------                                                        <---------ANAC58                     <-------                  ----------->GT1                       <---------ANAC58                     --------                 <---------HSFB2a(2)                <---------MYB59                          --------       ------>ZmHOX2a(2)                            ------>ZmHOX2a(2)     <---------ANAC46   <-------      <------ZmHOX2a(2)                           --------->ARR11(3)   --------->DEAR3(1)    --------     --------->ARR11(3)                           <---------ARR11(3)--------->ANAC58        ---------     <---------ARR11(3)   ---------->DOF2       <---------YAB1      --------->ANAC58     ============ ---->ANAC58     --------->HSFB2a(2)          --------->YAB1     <---------GLK1(2)       ---------->DOF2 ---->ANAC58   --------->At4g35610           --------->ICU4     --------->ATHB12     ------->TEIL --GLK1(2)     <---------At4g35610           <---------ATHB12  <---------YAB1--------->REM1(2)<------ZmHOX2a(2)   gcaaaacgatcttattcatctggaaaaaaaaagacagaactataccgatgatgatctaacttgtcttgattcgccatcgtgtagacgaaccaaaagatct  19386800          --------->ARR14(2)          <---------ARR14(2) ------->TEIL >ZmHOX2a(2)                                              --------->YAB1 -->CCA1(2)                                              <---------ATHB12 --ARR14(2)                  =====================bZIP_DOF*TSS--------->ARR11(3) ->ARR11(3)           >>>>>>>>>TBF1    <----------DOF2 --------->WOX13(1) ->ARR14(2) ------>ZmHOX2a(2)<---------O2  <---------ANAC58   <---------ARR11(3) --ARR11(3)<------ZmHOX2a(2) --------->O2  <---------ANAC58 <---------YAB1              <---------TOE2(3) ->AGP1   --------->ARR11(3) --------->TGA1a       --------->ANAC58                --------->ZAT6 >RVE1(1) <---------ARR11(3) <---------TGA1a       --------->ANAC58         <-----------GT1 ------->TEIL ======================================bZIP_DOF    --------->ANAC46        <---------AHL20(2)   <----   acgaacttcgaagatcggtgtgaagaagaagacgtctctctctttgcttacacaagtcaatgaagatagttttttttttaatctttcactaatgtatttt  19386900                   --------->ICU4                     <---------ANAC46            <---------ANAC46                        --------->ZAT14            <---------ANAC58                        <---------ZAT14            <---------ANAC58                     <---------ANAC46        <------------CBF                    <---------DAG2       --------->ATHB12     <---------ICU4  <----------DOF2            --------->ARR14(2)           -      <---------YAB1    <-----------GT1  <-----------GT1               <---------ARR14(2)          -- -------GT1<---------MYB46(3)        --------->AHL20(2)      ---------->DOF2     <---------TOE2(3)---   actctcttctcattggttgtaagtatttactaatttcgattttatacttttttgtgtagtagacaaagtcatggatttggattgagatttacagaaaaaa  19387000                                                            --------->ANAC58                                                          --------->ANAC58                                                          --------->ANAC58                                                        ------>NtERF2                                                       ----------->HVH21                                                       <---------SPL7                                             <---------AHL20(2)     --------->AHL20(1)            <--                                             --------->AHL20(2)     --------->AHL20(2)            <--                                             ----------->TBP----------->GT1          --------->ATHB12                                 ----------->GT1     <---------At4g35610            <---------AHL20(2)           --------->AHL20(2)   <------ZmHOX2a(1) ---------->DOF2   <---------AHL20(2)<------------CBF ---------->GT1    <----------DOF2       --------->AHL20(2) --------->ANAC58        --------->AHL20(2) ------->DAG2   --------->ARR11(3)     --------->AHL20(2)--------->SPL7         ----------->GT1<----- ------->DOF2   <---------ARR11(3)    --------->YAB1 --------->At4g35610 --------->AHL20(2)<---------GLK1(2)   aaaagtaaaaaaaaaaaatgtctttttcagaataggagtaaaataatataaatagagcggacgcgaaaaataaaatgaaatagagtttaattggaatctt  19387100                                                                            <<<<<<<<<TBF1                                                                         <<<<<<<<<TBF1                                                                      <<<<<<<<<TBF1    <----------DOF2                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <<<<<<<<<TBF1  <<<<<<<<<TBF1                             <<<<<<<<<TBF1                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------TOE1(3)  <-----------GT1                                <<<<<<<<<TBF1  <<<<<<<<<TBF1 -------TOE2(3) *TSS<----------DOF2 --------->ATHB12          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<- -----DOF2     <-----------GT1  <<<<<<<<<TBF1              <------------------------ANAC81         --   taggttacagggattattttctctttccttcttcttcttcattgttctctctctctctatctcttcttcttcttcttcttcttcttcttctttggatttt  19387200                                                                         <----------DOF2                                                                   <---------GLK1(1)                  <---------ARR14(2)       ---------->ID1      <---------TOE2(3) --------->At4g35610                   <----------DOF2       ---------->DOF2             <----------DOF2 <---------At4g35610                 ------>MYB46(1)        <---------AHL20(2) --------------->AGL15- --------ZAT18    --------->ARR14(2) ------>MYB83           --------->AHL20(2) <---------------AGL15< ------->ZAT18   <------ZmHOX2a(1) <---------MYB59 <---------ALFIN1--------->GLK1(1)     <---------DAG2   gtgagctaataaacagagaggaatcgccataaaaaaacctactttgtctttcaacaccgaaattaaaggaaatctctttttctctattgagcttttttct  19387300                                                           <---------TOE1(2)                                                           <---------TOE2(2)                                                 <---------ARR14(2)                                                 --------->ARR14(2)                                                <---------ZAT2                                                <---------At4g35610                                                --------->ZAT2                  <---------ANAC58           <-------TEIL <-----------RAV1(2)   --------->At5g28300                       ---------->DOF2                        --------->ARR14(2)  ----------->GT1 <---------ANAC58  --------->ICU4   <---------At4g35610            <---------ARR14(2) <---------DEAR3(1)              --------->ICU4 --------->At4g35610        <---------YAB1   <-------- -------->At4g35610   <---------CCA1(2) <-----------GT1<----------DOF2------>ZmHOX2a(1)   <----------DOF2 ---------At4g35610   ---------->ARF1<---------ICU4  --------->At4g35610<----------DOF2 <---------At4g35610   tcagcggtgaaatctcccttccttgtctctcagtagtgatttttacatacagctccgctctcaggtttcttcctcttttgattctgtttccgctcttttt  19387400                                                                                         ------>NtERF2                                                                                        --------->ANAC46                                                                                <------MYB46(1)             <---------AHL20(2)                                        --------->ATHB12 <---------ALFIN1             --------->AHL20(2)    --------->TOE2(3)                  <---------YAB1   --------->MYB46(3)          <---------ARR14(2) --------->ANAC46               <----------ID1      <------MYB83  <------      <---------LBD16    <---------WOX13(1)           --------->HSFB2a(2)  --------->ATHB12--------->MYB46(3) --DOF2   --------->ARR14(2)<---------TOE2(3)         <---------HSFB2a(2)<---------WOX13(1)<---------ALFIN1   gggtttacttcggattttaatcttcagattgacgaaaccctagtttgattttggtttcagaaacgacgagtcttcattgatttggtttccccaccagctc  19387500                                          <---------LBD16                                          <-------TEIL                                          --------->SPL7                                      --------->MYB111(2)               <---------ARR14(2)                                      --------->MYB46(2)      <---------ANAC46                                      --------->MYB59         <------MYB46(1)                                     <--------P    --------->GLK1(2)    --------->ARR14(2)                              <---------LBD16      <---------ARR14(2)  <------ZmHOX2a(1)                            ----------->HVH21     <---------GLK1(1)  <---------TOE1(3)      ---------                        <----------DOF2 <---------SPL7        <---------ANAC58              <--------                        <---------DAG2--------->MYB111(1)     <---------ANAC58             <---------LBD16      <----------DOF2<---------ARR11(3)<------MYB46(1)        <------MYB83            --------->GLK1(2) <<<<<<<<<TBF1       --------->ARR11(3)<------MYB83--------->ARR14(2)<---------TOE2(3)<---------ARR14(2) ---ARR11(3)      --------->LBD16    <---------MYB55(1)      --------->MYB59          --------->ARR14(2)   ttcttcttctttttttgttccgagacctttttgacggaggtaggtacggagggaatctggagttgggtttgaaggatactcttatgcgattcttctggat  19387600  Previous    Next  AGI:  At3g52240.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO46543.1) Range:  from: 19383692    to: 19386858    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52250.1    Description:  DNA binding / transcription factor. similar to hypothetical protein [Vitis vinifera] (GB:CAN62996.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68977.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 19387116    to: 19394078    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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