Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ------>ZmHOX2a(2)                                                        ============================HOX2a_HOX2a                                                       <---------GLK1(1)                                                       --------->GLK1(1)                                                      --------->ARR11(3)                                             --------->AHL20(1)               <---------ARR14(2)                                            --------->YAB1     --------->ANAC58             <---------AHL20(2)           >>>>>>>>>>GT-3b      --------->ANAC58            --------->AHL20(2)      --------->ANAC58  --------->ARR14(2)      --------->ARR14(2)           <---------YAB1           --------->ANAC58  <---------ARR11(3)      <---------ARR11(3)        <---------MYB52(1)          --------->ANAC46  <---------ARR14(2)      --------->ARR11(3)      ----------->GT1             --------->ANAC46    <---------AGP1         <------ZmHOX2a(1) -----ARR14(2)                 <---------ZAT14       <---------CCA1(2)     <---------TOE1(3)    <---- ---->ARR14(2)                 --------->ZAT14     --------->ALFIN1        <---------TOE2(3)  <------   tttgcaatcggttattatatgtgtaagtgctactacacacgaagaaaaataatgtggatctcttgaagcaatcggctaaggatattgagcctagagaata  19303600                                                                                     <-----------GT1                                                                                 --------->AHL20(2)                                                                                 --------->ATHB51                                                                                 <---------AHL20(2)                                                                                 <---------ICU4                                                                                <---------YAB1                                   <---------ARR11(3)                           --------->ICU4                                 --------->ANAC46                             <---------ICU4                     ----------->GT1                                          --------->YAB1                    <---------TOE2(3)         <---------DAG2            <----------DOF2 --------->MYB52(1)--------->DAG2--------->ANAC58              <---------O2  <---------AHL20(2) -------GT1       --------->MYB52(1)          <----------DOF2  --------->O2  <---------YAB1         < ---KAN4(2)       ---------->DOF2--------->ANAC58           <----------ARF1--------->YAB1  --------->AHL20(2)   accagacggttttcaacacataaaggaaaattttcaagaaattcgatactttttttttatgggagacgagacaacttttataattatttacaaaaatata  19303700                                                     <---------YAB1                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                    <---------AHL20(1)                                                    --------->AHL20(1)                                                    --------->AHL20(2)                                                <---------AHL20(2)                                            -------->HAHB4                                            <---------ICU4                                            <--------HAHB4                                            --------->ATHB51                                            --------->YAB1                                            <--------ATHB1                                  ---------                                           <---------YAB1--------->AHL20(2)                 ---------                                           <---------ATHB51                      ----------->GT1                        --------->AHL20(2) --------->AHL20(2)               --------->AHL20(2)                        <---------AHL20(2) --------->ICU4<---------AHL20(2) <---------AHL20(2)   ----                   <-------GAMYB         --------->YAB1  <---------AHL20(1)--------->AHL20(2)    ----                  <------MYB83  <----------DOF2--------->AHL20(2)      <---------AHL20(2)   ---------                  <------MYB46(1)       <---------AHL20(2)<---------AHL20(2)--------->AHL20(1)   ----                  <---------MYB46(3)   --------->AHL20(2)--------->AHL20(1)<---------AHL20(2)------>NtERF2        <---------WOX13(1)      <---------DAG2 <---------AHL20(2)      --------->AHL20(2)   --------- -------TEIL      ----------->GT1   <---------YAB1 --------->YAB1  <---------AHL20(2)  ---------->DOF2   gtttcatttgatttataagttggttataaattgactttatttttaataattaaatataatttaatgtgtttatttaaataatttagttataaagacgcca  19303800                                                                <------NtERF2                                                                ----------->HVH21                                                               ------>NtERF2                                                               --------->LBD16                                                             <---------LBD16                                                            <---------RAP2.3(1)      ----------->GT1                                      <---------RAP2.3(2) >RAP2.6(2)                                 --------->AHL20(2)<---------ANAC46 >ANAC58                       <---------MYB46(3)          <---------RAP2.6(2) ----->AtLEC2                  ----------->GT1             --------->ANAC46 ----->ANAC58                <---------MYB52(1)    <----------DOF2              <---------YAB1 >ANAC46               --------->ZAT18  <---------AHL20(2)<---------LBD16 --------->ICU4 ----->ANAC58          <-------TEIL     --------->AHL20(2)<---------At5g28300<---------YAB1 >ANAC58         ---------->DOF2      --------->YAB1     <-----------GT1----------->GT1   <----------   tgcaattgttgttaaaaccaaaagatgcactgtttgttaaaaataaatatatgctttatttacggcgggacaagtagttattatgttatgggatttatag  19303900                        <------MYB83                        <------MYB46(1)                        ----------->GT1               ----------->GT1 <---------AHL20(2)                     <---------ATHB12              ----------->GT1  --------->AHL20(2)             <---------HSFC1(2)             --------->DAG2  ----------->TBP                  --------->HSFC1(2)             <---------TOE2(3)--------->YAB1               ---------->DOF2               ---------->ID1   <---------MYB46(3)  --------->MYB59  <-----------HVH21--------->YAB1                 *TSS -TBP      ---------->DOF2   <---------YAB1             ----------->TBP         --------->ANAC46   <-   ttaagttgttgcaaaaaggttaaatttggttataaaaatagttgtcaaacgaatacctataaaaagcttccattcattttccaaaccattcgtctccatt  19304000                                                                                     <-----------GT1                      <---------YAB1                                        <---------ANAC46      <--          ------>ZmHOX2a(1) <------ZmHOX2a(1)                   <------MYB83<---------ANAC58<--------      <---------ARR14(2)  <---------TOE1(2)                 --------->ATHB12<---------ANAC58<--------      --------->ARR14(2)  <---------TOE2(2)    ----------->GT1  <------MYB46(1)     <-----------GT1 ---------DOF2  ------>ZmHOX2a(1) ------>ZmHOX2a(1)   <----------ID1  ----------->HVH21 ------>ZmHOX2a(1)   tcttttcaaatccttctcctaattctcataggattcctagataatagaatgggaaaacgacaagattggtctgtgactgcttgtattttcctgttcttgt  19304100                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                    <---------O2                                                                    --------->TGA1a                                                                    --------->ANAC55(2)                                                                    <---------At4g35610                                                                    --------->At4g35610                                                                    <---------TGA1a                                                                    --------->O2<---------ALFIN1                                                                    <---------ANAC55(2)                                                                    ----------->GT1                                         --------->ANAC58         <-----------RAV1(2)                                  ============================================bZIP_DOF                                  <----------DOF2                <---------MYB52(1)                                 <---------DAG2                 <-----------HVH21   --------->bZIP60(1)    ----------->RAV1(1)              --------->MYB52(2)--------->ANAC46       - --------DOF2          --------->PCF2    --------->ANAC58=====================MYC_MYB             --- -ANAC58              <------ZmHOX2a(1)  --------->ANAC46<--------P ================================= -ANAC58  --------->GLK1(1) <---------ALFIN1           ----------->GT1----------->HVH21   <---------YAB1   ctttggcatcacaaatccattgtaggagccacataccttttccaagccctaagcgaggggttagttcgtcaggtgacacgagccacttcaatgtgattca  19304200                                           --------->ARR14(2)                                          <---------ZAT2                                          --------->At4g35610  <---------O2                               ------>ZmHOX2a(2)               --------->O2                              --------->CCA1(2)                --------->TGA1a                              <------ZmHOX2a(2)    --------->SPL7    <----------DOF2                             <---------AGP1<---------ALFIN1    <---------TGA1a  --------->ZAT14                             --------->AGP1<---------ARR14(2)  --------->bZIP60(1)    <-------GAMYB                             <-----------ARR10 --------->LBD16 <---------bZIP60(1)   <---------MYB46(3)                             --------->ARR11(3)<---------LBD16 =================bZIP_DOF  <----------                             <---------ARR11(3)--------->HSFB2a(2) --------->MYB52(2)--------->MYB55(2)                         ---------->DOF2  <---------At4g35610 <---------TOE2(3) --------->SPL7                         ================================================bZIP_DOF   --------->ALFIN1      --------->ALFIN1<------ZmHOX2a(1)   --------->ZAT2    ----------->HVH21   <---------ZAT14  ----  ---------->DOF2     ================HOX2a_HOX2a--------->LBD16 <---------MYB52(1)<---------MYB52(1) -------->ANAC46      ===============HOX2a_HOX2a--------->LBD16===============================MYC_MYB ------>ANAC46    ---------->DOF2      --------->At4g35610  ----------->TGA1--------->ZAT6<---------bZIP60(2) ============bZIP_DOF<----------ID1    <---------At4g35610----------->RAV1(2) <---------SPL7    -----   acgcgaaagtgtgccttcgccaaaggacaaagatctaattcagcagctccccggacaaccttctgacgttactttcaaacagtacggtggttatgtggcc  19304300                <------MYB83                <------MYB46(1)              <---------MYB55(1)                                                         <---------TOE2(2)              <--------P                                                            --------->MYB52(1)             <---------MYB52(1)                            --------->ZAT6          <---------WRKY38(1)            <---------SPL7                             --------->At5g28300         <---------WRKY12         ------>MYB83--------------->AtSPL8           --------->LBD16        ------>ZmHOX2a(2) -RAV1(1)------>MYB46(1)     <---------YAB1--------->MYB46(3)       ================HOX2a_HOX2a  ---- ----->At5g28300<---------DEAR3(2)  <-------GAMYB     ----------->GT1      --------->ARR11(3)    <--- ---->RAP2.6(2)<---------DEAR3(1)  <---------ANAC46 <---------LBD16 ------>ZmHOX2a(1)  ------->GAMYB   gtaaacaaaccagccggtcggtttttgtactattatttcgttgaaaccatcaaacccggtaacactactcctcttgtgatctggttcaacggaggtatgt  19304400                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC58             <-----------GT1                                 <---------MYB52(1)          --------->AHL20(2)                                <----------DOF2         <---------AHL20(2)          <---------CCA1(2)                                <---------------AGL15   --------->AHL20(2)     --------->At4g35610                               <-----------------AGL3   <---------AHL20(1)   <---------DEAR3(1)                         <---------GLK1(2)          <---------AHL20(2)      <---------ZAT2     <-----                      --------->HSFC1(1)           --------->AHL20(1) <------ZmHOX2a(1)       <------NtERF2 --->TEIL             <---------HSFB2a(2)          <---------AHL20(1)----------->HVH21      --------- ----TEIL             --------->HSFB2a(2)    ----------->GT1 <---------AHL20(2)<---------At4g35610   acatatagagaacatgtattccctctagaaactcctttacttggaactagttatatattttatttttttacaggaccgggctgctcatctctaggtgggg  19304500  Previous    Next  AGI:  At3g52000.1    Description:  SCPL36 (serine carboxypeptidase-like 36); serine carboxypeptidase. Identical to Serine carboxypeptidase-like 36 precursor (SCPL36) [Arabidopsis Thaliana] (GB:Q9SV04); similar to SCPL38 (serine carboxypeptidase-like 38), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G05850.1); similar to SCPL37 (serine carboxypeptidase-like 37), serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT3G52010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40750.1); similar to putative serine carboxypeptidase [Pisum sativum] (GB:CAC19488.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40749.1); contains InterPro domain Pe Range:  from: 19303988    to: 19305680    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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