Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------HSFB2a(1)                                                                     --------->HSFC1(2)                                                                     --------->HSFB2a(1)                       <---------ARR11(3)                     <----------DOF2                   ---------->DOF2                         ------>NtERF2                 ----------------->AGL1                    --------->LBD16                          <      <---------bZIP60(1)                            <---------MYB46(3)                            <-      --------->bZIP60(1)                          <-------GAMYB     <---------HSFC1(2)           --- -------->DOF2<---------MYB52(1)                   <---------At4g35610                          ----- -->YAB1     <-------GAMYB                  <---------MYB46(3)--------------------->WRI1        <---- --ATHB12  <------NtERF2                    <-----------RAV1(1)    <---------GLK1(2)           ------ ->ICU4   ------>NtERF2--------->ARR11(3) ----------->RAV1(2)<---------DAG2                <---------   caaaagtgatgccaccgttgccaaagatgtcaacatcgctcatcatctgttgcagttgttccgcctttggattcttccccatcgacttcatcactttcgt  19280100                                                                  <---------AHL20(1)                                                                  --------->AHL20(1) ---------GLK1(2)                  --------->YAB1                 --------->AHL20(2) --------At4g35610             <-------TEIL                       <---------AHL20(2) ------>MYB52(2)              --------->ANAC58                   --------->AHL20(2) ---->DOF5.7(2)               --------->ANAC58               <---------YAB1 -----MYB52(1)               ------->MYC3                 --------->GLK1(2)                ---------- --->TOE2(3)     ------->TEIL<-------MYC3                <---------GLK1(2)               --------->ANAC58 -DOF2 ------>ZmHOX2a(1)<-----------HVH21             <------ZmHOX2a(2)                  --------->ANAC58   tagcttctccttcgtgatgaaccctgtttcacatgcatcataacatcatcaaaccgatcgattctgaataaatttgtgtatcaaatcgaacaagaaagag  19280200                                                                                         <---------ARR11(3)                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                         <-----------ARR10                                                                                         --------->ARR11(3)                                                                                    --------->LBD16                                                                                    ------>NtERF2                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                                   --------->RAP2.6(2)                                                                                   --------->ANAC58                                                                                   ------->GAMYB                                                                                  --------->MYB46(3)                                                                             --------->ANAC58                                                                     <---------At4g35610 <---------ARR11(1)                                                            <---------ARR14(2)   <---------ATERF1(1)                     <---------HSFB2a(1)                    <---------AGP1 ---------->DOF2                    --------->GLK1(2)                       --------->ARR14(2)  --------->ARR14(2)              --------->MYB52(1)                           <---------CCA1(2) --------->ANAC58    <---    ---------->DOF2<---------GLK1(2)          ----------->GT1        --------->At4g35610<---------CCA1(2) >DOF2       --------->AtMYB61                <---------ANAC46------>ZmHOX2a(2) <---------ARR14(2)---   agagaacaaagcagaccatcggaatctttgtctatgagacagaaggcttcgtaaaactcttggatctgttcatctgtgaaagcatccgccatatcttcga  19280300                                                                                                  <--      ---------->DOF2                       <---------GLK1(2)                                     --- ---------->DOF2                           --------->At4g35610            >>>>>>>>>TBF1    --------->YAB1 ---ZmHOX2a(2)        <----------DOF2      <---------At4g35610   <---------YAB1         --------->WOX13(1) ------>YAB1---------->DOF2          <---------YAB1           <---------ZAT6         --------->GLK1(2)   tcacaaagaaaagtcaaagtctgtctttgattcaatctgatgatcagcttctcttaatttgttagtgatgagagaagaagaagggagcatctatcacatt  19280400      <-----------HVH21     --------->ANAC46                <---------WRKY38(1)    <---------ANAC46     --------->bZIP60(2)             <---------WRKY12       <---------ANAC58                  -------  --------->ZAT18                   --------->WRKY18(1)     <---------ANAC58          <---------ANAC58  <-------TEIL                     <-----------HVH21     *TSS                 <---------RVE1(1)  <---------ZAT18                  <--------ZAP1    ----------->HVH21 --------->MYB52(2)      ------- -------------AtSPL8             --------->LBD16  <---------ICU4   --------->TOE2(3)  <---------ANAC58 ------------>AtSPL8            <---------LBD16   --------->YAB1 <---------YAB1   <---------AHL20(2)   taagtacacatcacctcttggctctaggctcttgcccggtcaaggtcaatactcatgaccttgcgttttcattagttgtgatattttttcttgagcacga  19280500       =================bZIP_DOF       --------->O2                                                                                --       --------->TGA1a                                                                            <--       <---------TGA1a                                                                           ----       <---------O2                                                                              <---       --------->ANAC58                                                                          ----       <---------ANAC55(2)                                                                       <---       --------->ANAC58                                                                          ----       --------->ANAC55(2)                                                                       <---    ----------->HVH21                                                                           <----   <-----------HVH21                                                                          -------  --------->bZIP60(2)                                   --------->YAB1                   --------->AHL20(2)  --------->ANAC46                                     <---------YAB1                    <---------AHL20(2) --------->LBD16                                <----------DOF2       --------->AHL20(2) --------->AHL20(1) -->ANAC58                 <---------YAB1    <-----------GT1    <---------YAB1          --------->AHL20(2) -->ANAC58   <----------DOF2                <<<<<<<<<<GT-3b  --------->ICU4             <---------AHL20(2)   ttccaggtcacgcgtctttgttcaaacttatgacttcaacgcttatttttctttattttcatagttattagaaaaaatacttatagggaattaaattagg  19280600     --------->ATHB12     <---------ICU4                                                                                --    <---------YAB1                                                                               <---    --------->ICU4                                                                              <---- <---------YAB1                                                                             <-------- ---->ZmHOX2a(2)                                                                          <---------ICU4 ----ZmHOX2a(2)                                                                           --------->ATHB51 ----->ARR14(2)                                                                           --------->ATHB12 ------ARR11(3)                                                                           -------->HAHB4 ----->ARR11(3)                                                   --------->SPL7          <--------ATHB1 ------ARR14(3)                                                 <---------SPL7           --------->AHL20(2) ----->ARR14(3)        --------->ALFIN1                   ---------->DOF2                <---------AHL20(2) ------ARR14(2)  ---------->DOF2                        --------->AHL20(2)               <---------ATHB51 --ZmHOX2a(1)---------->DOF2                 <------ZmHOX2a(1)--------------->AtSPL3     --------->ICU4 -->MYB59 <----------ID1          <---------LBD16       <---------AHL20(2)          <---------TOE2(3)   atcttgattattgcgaaaagaaagggtggagtaatgctcgggtttgaggactcaagaattaaaagtcgtacaccaagttgcattttaagaaataattgat  19280700                                                      --------->MYB46(3)    <---------CCA1(2)                              ------>ZmHOX2a(1)  <---------ANAC58                             <---------ZAT18                             ----------  <---------ANAC58                     --------->ATHB51                             <----------DOF2 ----->TEIL                            --------->AHL20(2)                     ----------->GT1 ------SPL7                 <---------YAB1     --------->ZAT18                <---------ANAC55(2) -----REM1(1)   <-----------GT1       <---------MYB52(1)             --------->GLK1(1)    --------->DAG2 -WOX13(1)  <---------TOE2(3)    <-----------GT1  <---------MYB59    <---------GLK1(1)   ---------->DOF2   gtacgcgtgtctctaatgtaacccttgattttgattttccattatttagtgtcctaacaacttctgtcaagaattccattcagtaactttgaaaagttat  19280800               --------->DAG2              ---------->DOF2         --------->YAB1         --------->TOE1(3)         --------->TOE2(3)                                                      <---------YAB1         <---------------AGL15                                             <---------ICU4         --------------->AGL15        <------MYB46(1)                      --------->YAB1        ----------------->AGL3        <------MYB83                        --------->ICU4        <---------YAB1              --------->ALFIN1   ------>MYB46(1)    <---------ATHB12 <---------ANAC58           --------->TOE2(3)          ------>MYB83  ----------->GT1 <---------ANAC58         <---------ARR11(3)      <-----------GT1   --------->DAG2 <---------ANAC46         --------->ARR11(3)  --------->AHL20(2)  ---------->DOF2             ------- ->GT1<-----------GT1    <---------CCA1(2)    <---------AHL20(2)<---------AHL20(2)     --------->MYB52(1)   atgtcttgttaccataaaaagcgaaacatatcttagaagtgggttttttttaataccaaatgggatttaaaaggtaatcaatatgaaaaaaacggactga  19280900                                                --------->CCA1(2)                                          --------->AtLEC2                                     --------->ANAC58                       <---------YAB1         <-         <-----------GT1             --------->ANAC58                <---------ANAC46       <-------- ---->HVH21                        ---------->DOF2               --------->ARR11(3)      ------>ZmHOX2a(1)   ccataaacatttttcttcttgtacaaacatgtctctccaaagcaatgcagataagagatttgttagagatgttgtgttctaattctaactcctactttta  19281000  Previous    Next  AGI:  At3g51920.1    Description:  CAM9 (CALMODULIN 9); calcium ion binding. Identical to Calmodulin-like protein 9 (CAM9) [Arabidopsis Thaliana] (GB:Q9S744); similar to CAM4 (CALMODULIN 4), calcium ion binding [Arabidopsis thaliana] (TAIR:AT1G66410.1); similar to CAM1 (CALMODULIN 1), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G37780.1); similar to calmodulin [Plasmodium berghei strain ANKA] (GB:XP_675328.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 19279021    to: 19280457    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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