Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------ALFIN1         ----------->TCP11(1)                                       <---------ARR11(3)           <---------MYB46(3)                                     --------->ANAC58              --------->ALFIN1                                     --------->ANAC58        <------ZmHOX2a(2) ----ANAC58               <-----------RAV1(1)        <---------REM1(1)        --------->TOE1(3)     < ----ANAC46            --------->ATHB12--------->ARR11(3)    ----------->HVH21--------->TOE2(3)   <-- ----ANAC58   <------ZmHOX2a(1)   <------NtERF2    --------->At4g35610<---------PCF2              <--   tccaatggaagtgagaggagtttcttcattgttggaggcaagacctcgacctctgatgaagcgatcacggtgggccaaaaccttgaagtactccaaactt  19070600                                             --------->TGA2(2)                                            --------->TOE2(3)                                            <-----------HVH21                 <-----------HVH21          <-----------TGA1                ----------->GT1            --------->ANAC46                ------>ZmHOX2a(2)          --------->ANAC58              --------->ARR11(3)           --------->bZIP60(2)              <---------ARR11(3)      <---------WRKY18(1)     --------->HSFB2a(2)            <---------WOX13(1)    <---------ANAC46     <---------HSFB2a(2)           <---------ANAC58      --------->ALFIN1 ---------MYB52(1)      --------->TOE1(2)  --------->ANAC58  <---------ZAT18      <---------HSFB2a(2) -------ANAC58<---------ARR14(2)   <---------ANAC58     <-------MYC3              --------->HSFB2a(2) -------ANAC58--------->ARR14(2)   <---------AtLEC2     ------->MYC3   --------->At4g35610 <---------ALFIN1   ccgttttctggcactagatcgtcaaacccaagagtttgcttgactacgtcagagaacatgtggtgaacttcgaagctaaacttcccagaagcctcacatc  19070700                       --------->MYB52(1)               <------ZmHOX2a(2)                             --------->YAB1              --------->ARR11(3)                            <-------TEIL              <---------ARR11(3)                  <---------ANAC58          ---------->DOF2                         <---------ANAC58                           --------        XXXXXXXXXXXXXXXXXXXXX>MIR840 --------->ZAT6       --------->TOE2(3)      <----------DOF2   <---------ALFIN1  <---------MYB52(2)           <---------ANAC46 --------->TOE2(3)      --------->AHL20(2)   tctccaaaccccaaaagatcaaaactaacatagacaataacacaaacacttggcgtgcaacgttcataacttcaatctcgaggcttttccgataaaataa  19070800                                                                <---------ARR14(2)                                                                --------->ARR14(2)                                                              <---------RAP2.6(3)              <-----                                                             <---------ANAC46                  <-----         ----------->GT1                     --------->ZAT18 <---------ANAC58                 -------       --------->LBD16 <---------AHL20(2)    <---------ZAT14 <---------ANAC58            ---------->DOF2      --------->HSFB2a(2)          --------->CCA1(2)  --------->ANAC58          <---------TOE2(3)<---      <---------HSFB2a(2)        --------->At4g35610  --------->ANAC58   <------ZmHOX2a(1) --------->DAG2 ->AHL20(2)            --------->AHL20(2)    --------->ZAT14----------------->AGL1<------ZmHOX2a(1)   tacaacttccagagtaaaactctgtttaatttctcagataaacgatgtacactggtacgaatgccgtatttgtaaggagattgaggaaatgaaaaggtca  19070900      <---------ANAC58                                                                     ------>ZmHOX2a(1)      <---------ANAC58                                                                   ------>ZmHOX2a(2)    <---------WRKY18(1)                 <---------KAN4(1)                               <------ZmHOX2a(2) ----WRKY12                    <---------YAB1                                          --------->ARR14(2) ----WRKY38(1)           --------->ARR14(2)                                            <---------ARR14(2) -->WRKY18(1)         --------->HSFB2a(2)                   <---------AHL20(2)    <----------DOF2 ------At4g35610      <---------HSFB2a(2)               ----------->GT1       <---------MYB52(1)<----   acagcttgacttgttcgcattgttccagacatgctgatttgaatgttcgagctaagagttgtttaatcggagtagtagccattactttggatcctcttct  19071000               *TSS               <---------TOE2(3)               --------->DAG2                                                                    <---          --------->TOE1(3)                              --------->At4g35610               <---------WRKY45          --------->TOE2(3)                         --------->WRKY12                       <---------ZAT18          <---------MYB59                           --------->WRKY38(1)   <---------YAB1   <---------WRKY38(1)        ------->TEIL                              <-------GAMYB        --------->ICU4 <---------MYB52(1)       <---------ARR11(3)                         --------->At4g35610  <---------MYB52(1)  <---------WRKY12     --------->ANAC58                    <---------LBD16 <---------At4g35610         <-------GAMYB     --------->ANAC58          <---------GLK1(2)  <---------At4g35610 <---------RAP2.6(3) <<<<<<<<<<WRKY6 ------DOF2  ---------->DOF2  <------NtERF2--------->LBD16 ----------->HVH21--------->YAB1<<<<<<<<<<WRKY11   ttttcccaagaacctaaaaggttgacgaaggcagagtctcttatccggagggagttgacttctgacattagccgttattaataagtctgttagtcaactc  19071100                                                                                                    <                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                        =============                                                                                   <---------DAG2   -                                        --------->ZAT14                       <----------DOF2<-------                                      --------->ANAC46              ------->GAMYB  <----------DOF2  <                             <---------CCA1(2)                     --------->MYB46(3)   <------------                  <---------DAG2      --------->ANAC55(2)          <---------MYB52(2)   -------------     <---------LBD16       <---------ANAC46                     <---------WRKY12<-----------GT1     - -------DOF2      <----------DOF2   <-----------GT1--------->ARR14(2)      <---------ARR11(3)<-------   tttttttttcggaaaaacccctttattcttcgtatatttcacttaactccctgtattctcttctgttcaacgaacaatttctttacttttctatttcgtg  19071200       <---------------AGL15       --------------->AGL15      ----------------->AG      ----------------->AGL1      ----------------->AGL3 --------->AHL20(2) <---------ICU4 ---------ATHB51 --ANAC58 --->GT1------>ZmHOX2a(1) --ANAC58                                                                                    -------- ======================MADS_MADS                                                            <-------- -------->ICU4                                                                              --------- --ANAC46                                   --------->YAB1                              <---------WOX13(1) ---------AHL20(2)                         <---------YAB1<---------At4g35610         <---------AHL20(2) ---AGL15                                 --------->AHL20(2)                       --------->ANAC55(2) -->AGL15                               <---------MYB52(1)                     <----------DOF2 <----- -------->AHL20(2)          ----------->HVH21        <-----------HVH21    <-----------GT1  <---------TOE2(3) --ANAC55(2)<---------AHL20(2)         <---------RAP2.6(3)<---------GLK1(2)    <---------DAG2<-------   aaataatttcctatttaagtgagataacttctgacattagccgttataataagtctgtcagattatcacgaagtttatacactttatgtaattgatgatt  19071300   --------->AtLEC2            --------->ANAC55(2) ->ATHB12       <---------ARR14(2) -YAB1          --------->ARR14(2) >ICU4------->TEIL         <---------DAG2                <-----------GT1   --------->YAB1 ----WOX13(1)  --------->GLK1(1)                     --------->ICU4       <---------ATHB12 --ICU4 <----------DOF2    <----------DOF2      <----------ARF1       --------->MYB46(3)   gctccatgcactttgacatatccaaaacactttatgtaacaaaaacaggggagacaagattaccactctcaaaccaatgaaaattgttttgcacatcaaa  19071400                                    --------->ANAC58                                    --------->ANAC58                                <------ZmHOX2a(1)                                  --------->TOE2(2)                                <------MYB83         --------->ANAC55(2)      --------->TOE1(2)                              <--------P       <-----------GT1       <---------WRKY38(1)                          ---------->DOF2    --------->MYB52(2)      --------->WRKY18(1)                         <---------------AGL15    <---------MYB46(3)     <-----------HVH21      <---------ANAC58     ----------------->AGL1<------ZmHOX2a(1) ------------>MYB.PH3(2)  ----------->GT1         <---------ANAC58<------ZmHOX2a(1)<------MYB46(1)  <   cgaagtttgttactgaatgaacacaaaatggtcaaaccaaggaaaacatatggcttctgtgattcacaggaaggccaaaagaggtaggagaagtaggagt  19071500  Previous    Next  AGI:  At3g51340.1    Description:  pepsin A. similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G51330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23259.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 19067992    to: 19071015    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51350.1    Description:  aspartyl protease family protein. similar to pepsin A [Arabidopsis thaliana] (TAIR:AT3G51340.1); similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:AT3G51330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23259.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 19071301    to: 19074489    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version