Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                       <------MYB83                                                                                   --------->LBD16                                                                                  --------->HSFB2a(2)                                                                                  <---------HSFB2a(2)                                                                                  <---------ANAC58                                  --------->DOF5.7(2)                             <---------ANAC58                              ------>NtERF2                                       <---------ANAC46                             --------->DEAR3(1)                                  <---------LBD16                          <---------ATERF1(2)                                <---------HSFC1(2)                     --------->YAB1--------->WRKY38(1)                       --------->HSFC1(2)              ------>NtERF2  <---------ALFIN1                                --------->HSFB2a(1)            --------->RAP2.6(3)<------NtERF2                       <------ZmHOX2a(2)   <------MYB46(1)          --------->MYB46(3)<---------ABI4(2)                     --------->ARR11(3)   <---------MYB46(3)     <---------HSFB2a(2)  --------->ATERF1(2)           --------->ATHB12     <---------HSFB2a(1)     --------->HSFB2a(2) --------->RAP2.6(3)           --------->ICU4        --------->At4g35610 --------TOE2(3)    <---------YAB1<---------MYB52(1)   <---------YAB1---------->DOF2  <---------AtMYB61 ------DOF2------->GAMYB--------->MYB52(1)      ---------->DOF2   <---------ARR11(3)  --------->ALFIN1   ttaggttctacaacgacggcctatgataccggcaccgttcaccacgagaagaaaggcatgatggagaagatcaaagagaagcttccgggtggtcatcatt  18953700                       <-----------RAV1(1)                       <---------ANAC58                       --------->ALFIN1                       <---------ANAC58                       <---------ANAC46                     <------MYB46(1)                     <---------ANAC58                     <------MYB83                             --------->AHL20(2)                     <---------ANAC58                     --------->AHL20(2)                    <---------MYB46(3)                    <---------AHL20(2)                    --------->MYB111(1)                   --------->AHL20(1)                    <---------AtMYB61                     <---------AHL20(1)       --------->AHL20(2)       <---------MYB52(1)<---------AtLEC2 <-------TEIL       --------->MYB46(2)            <---------ANAC58 -->TOE2(3) <-----------GT1    <-------GAMYB  <-------GAMYB   --------->YAB1    <---------ANAC58 ->ATHB12  --------->AHL20(2) --------->MYB52(2)  <---------ANAC58              <---------ANAC58 --ICU4<---------YAB1<---------ANAC46        <---------DEAR3(1)                 --------->ANAC55(2) -HAHB4<---------AHL20(2)     <---------MYB46(3)  <---------ANAC46             --------------->AtSPL8 -YAB1--------->AHL20(2)  <---------MYB46(3) --------->MYB52(2)            <----------DOF2      <---- >ICU4<---------AHL20(2) --------->ALFIN1    <---------MYB46(3)   <-----------GT1     --------->TOE2(3)   agtttcattttaattaacttgtttggtgtgggtcgttacgcttatggtcgttgcatggaataaattataaaccctctctttttcgtaacatttatggctc  18953800                                                    <-------TEIL                                                 <------MYB46(1)                                                 <------MYB83                                                 <---------DEAR3(2)                                                <---------MYB46(3)                                           <---------O2                                           =============MYC_MYB                                           --------->TGA1a                                      --------->At4g35610                          --------->YAB1                                      <---------At4g35610                        --------->AHL20(2)                           <---------TOE1(3)   --------->ALFIN1                 <---------AHL20(2)                     =======================================================================MADS_MADS                     <---------------AGL15 <---------TGA1a                      --------->AHL20(2)                     --------------->AGL15 --------->O2              --------->ARR11(3)   --------->MYB52(1)              <---------WOX13(1) <---------ZAT6<--------P    <---------YAB1 <---------------AGL15   <           <---------YAB1  <---------TOE2(3)  <---------MYB52(1)     <---------ARR11(3)  ---------->DOF2 -------RAV1(2)     <-----------------AGL1<---------LBD16 --------->GLK1(2) =========================   aggctctattgttttgagtgatacaaattaaggtaatgttagcacacgggtgggttcacgattctaatcgacatcttcccatttaaaataacaaagggat  18953900                                                                          --------->GLK1(2)                                                                          --------->ARR14(2)                                                                          <---------ARR11(1)                                                                          <---------ARR14(2)                                                        <---------------AGL15                   -----                                                       <-----------------AGL3               ---------                                                   --------->At5g28300    ------->TEIL      <--------                                                   --------->DOF5.7(2)   <---------ARR14(1)-------->P                                                  ----------->GT1    <-----------GT1       ------>MYB83                           <----------ID1 ----------->GT1            --------->MYB52(1)    ------>MYB46(1) <---------TOE2(3)   ---------->DOF2    ----------->GT1----------------->AGL3             ----------- ---------->ID1 ----------->RAV1(1)    <------ZmHOX2a(1)--------------->AGL15   <---------CCA1(2) -----------GT1--------->ANAC46 ---------->DOF2--------->GLK1(2)  <---------REM1(1)      --------->AtMYB61 =======================================================================MADS_MADS       --------->MYB46(3)   tttgacgttttctattcccaacacaaaggaagacaaaagaaggagtgaaaatcggtaactatatatagatgtaacgaatcttatatccaaaccaacactc  18954000                                          <---------ANAC58                                          <---------bZIP60(2)                                          <---------ANAC46                                          <---------ANAC55(2)                                          <---------ANAC58                                          <---------TGA1a                                          <---------O2                                          --------->O2                                          --------->TGA1a                                          --------->bZIP60(1)                                          --------->ANAC55(2)                                          <---------bZIP60(1)                                         ----------->STF1                                        <---------DOF5.7(2)                                       ----------->TGA1                                      --------->DOF5.7(2)                                     <-------MYC3                                     ------->MYC3                ------>NtERF2                  --------->MYB46(3)--------->O2                --------->ANAC58        <-----------GT1             <---------O2                --------->ANAC58        <---------ARR14(2)     --------->ANAC58                --------->ATERF1(1)      <---------ATHB12    <---------TOE2(3)          --------->ANAC46               <---------TGA2(2)         --------->MYB46(3)  --------->AHL20(2)         ---------->DOF2----------->HVH21 <---------ATERF1(1)      ------>MYB46(1)  <---------AHL20(2)       <---------AHL20(2)         <---------YAB1                   -------->P ---->YAB1     <---------ALFIN1--------->ANAC58     --------->YAB1                     ------>MYB83 >ZAT6  --------->ARR14(2) --------->AHL20(2)      <---------ATHB12     ------>ZmHOX2a(1)  --------->AtLEC2 -ALFIN1------->TEIL----------->RAV1(1)--------->WRKY12      ----------->TGA1--------->AHL20(2) <---- >RAV1(1)    <---------ALFIN1=======================bZIP_DOF ----------->HVH21    <-----------GT1----   acaattaatgtatccccccatccaacaaattaaaagccacgttgacgtgacaaatcatacttggtgacgccttcctctataaattatccaaccatgcatt  18954100                                                              <------NtERF2                *TSS                                        <---------ANAC58               <---------ICU4                               <---------ANAC46               --------->ATHB51                             <---------ANAC58          ------------>CBF                            <---------WRKY12                        <------ <-----------HVH21                             --------->At5g28300                           <------- <-----------TGA1                             ----------->GT1 ------>NtERF2             <-----------RAV1(1) ---TEIL --------->ANAC46                  --------->MYB52(1)--------->LBD16    <-----------ARR10 ----->YAB1    --------->YAB1    <---------ATHB12--------->ZAT14               <---------CCA1(2)   catcgtcattcccacaataatcgctgagagtccaaatgaatacaaaaacggtgaagtcaatggcgggcattgttctctctcaaatctcacttgttgcgct  18954200                                           --------->ZAT14                                   --------                                      --------->ZAT2                                   --------->ANAC58                                    ------->PIF5                                       --------->ANAC58                                    <-------MYC3                                     ================                                    ------->MYC3                                <---------ZAT18                                    <-------MYC2                                --------->ZAT18   ------>ZmHOX2a(1)                ------->MYC2                      <---------HSFB2a(2)    -------- ---At4g35610     <---------YAB1    <-------PIF5                      --------->HSFB2a(2)    -------- --ANAC46 ------->TEIL       ---------->DOF2                       <-----------GT1   ---------->DOF2   gtttcctctatgtatttgttatcaaacacatcaaagcacgagctctgtagcctctctatcccctcagttttacgagaactcgtgcccaaacgcacaagcc  18954300                <------NtERF2               ------>NtERF2           <---------ANAC58           <---------ANAC58           --------->bZIP60(1)           <---------bZIP60(1)           --------->ANAC46                                                                         <           <---------TGA1a                                                                          < ->ANAC58  --------->TGA1a                                                            <<<<<<<<<WRKY18 ====================bZIP_DOF                     --------->TOE2(3)                 --------->TOE2(3) ->ANAC46  <---------O2                  <---------AtLEC2                          <---------ANAC46 - ->ANAC58  --------->O2         <---------ATHB12------>NtERF2             --------->ANAC46          -   atcgttcaatcttacgtcgccaatgcatacttcaatgaccctcgcatggctgcctcaattcttaggctccatttccacgactgtttcgtcaatgtttgac  18954400                                                                                 --------->ZAT14                                                                                 <---------ZAT14                                                                              <------MYB83                                                                              <------MYB46(1)                                                                             <---------DEAR3(1)                                                                             --------->MYB111(2)                                                                             <---------AtMYB61                                                                             --------->MYB46(2)                                                                             --------->MYB55(2)                                                                             --------->MYB111(1)    -                                                                             <---------MYB46(3)    --                                                                            <--------P             <-                                    <---------AHL20(2)                      <---------MYB55(1)     <- -----------ARR10              <---------YAB1                              <---------MYB52(1)  <----- ---------ARR11(3)       <---------TOE2(3)  <------ZmHOX2a(1)             <---------MYB46(3)   <----- -------->ARR11(3)     <---------AHL20(2)  ----------->GT1      --------->AHL20(2)           <------- -------->GLK1(2)  --------->CCA1(2)--------->AHL20(2)          <---------AHL20(2)        -----------   aaaatctagtctattcttcagatatataatgttttgatttaaataaggagaaatgttgtttgatatatatatactctggttggtgcagggatgtgatgct  18954500                                                                      <---------HSFC1(2) -------->LBD16                                                       --------->HSFB2a(1) ------->ANAC55(2)                                                    <---------HSFB2a(1) --------ANAC58                                                       --------->HSFC1(2)   <------ZmHOX2a(2) --------ANAC58                                                      <---------TOE1(2)     ========== ----ANAC58                                                    --------->At4g35610        --------->ARR11(3) ----ANAC58              --------->AtLEC2 <------ZmHOX2a(2)    --------->ZAT2             <---------ARR11(3) --YAB1          <---------ZAT6 <----------ID1                 <---------ZAT2       >>>>>>>>>WRKY18 >HVH21      <---------ZAT14---------->DOF2                --------->GLK1(2)    --------->ATHB12   tccgtactattggacagtagtggaaccatggaaagcgagaaacgatcaaatgcaaatcgagactctgctcgagggttcgaagtcattgacgagatcaagt  18954600  Previous    Next  AGI:  At3g50980.1    Description:  XERO1 (DEHYDRIN XERO 1). Identical to Dehydrin Xero 1 (XERO1) [Arabidopsis Thaliana] (GB:P25863;GB:Q0WP39;GB:Q9SD47); contains InterPro domain Dehydrin; (InterPro:IPR000167) Range:  from: 18952906    to: 18953846    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g50990.1    Description:  peroxidase. Identical to Peroxidase 36 precursor (PER36) [Arabidopsis Thaliana] (GB:Q9SD46;GB:Q0WLV3); similar to peroxidase 72 (PER72) (P72) (PRXR8) [Arabidopsis thaliana] (TAIR:AT5G66390.1); similar to hypothetical protein [Thellungiella halophila] (GB:ABB45838.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 18954116    to: 18955792    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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