Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->ANAC58                                                ----------->GT1                 --------->ZAT6                 --------->ANAC58           <------ZmHOX2a(1)               --------->ANAC58       <------ZmHOX2a(1)                   --------->ANAC58           <---------YAB1     <---------TOE2(3)                 <-----------HVH21         ----------->GT1   --------->AtMYB61   aattcttgaggaaggagtttcactaagacagagtatgtgtctgtcaaggcaagtaaaatgctccatggagttacaattgccatcaccatcgctaaatagc  18900400                                                              ------->GAMYB                                                              --------->AtMYB61                                                            ------>MYB83                                                            -------->P                                                            ------>MYB46(1)                                                  --------->YAB1                                                 <---------YAB1           --------->TOE2(3)                                      <---------YAB1      --------->AtMYB61                                   ------>ZmHOX2a(1)<---------YAB1     --------->ARR14(2)                                   --------->ICU4--------->ICU4        <---------ARR14(2) <---------YAB1                      ====================HOX2a_HOX2a    --------->MYB46(3)           <----------DOF2  --------->MYB52(1)  <------ZmHOX2a(2)        --------->YAB1--------->MYB46(3)       <---------DAG2  ----------->RAV1(1)<---------ARR11(3)  ------->TEIL    <---------MYB52(2)------>ZmHOX2a(1)   taaacaacagatagacacagagagatcaaaatcagtccttatgaatcagttatcatgaaaccaaccaaaaccctatcctcaagagtgactttttgattac  18900500                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    -                            --------->ARR14(2)                                                     <-             <---------ANAC58                                             --------->YAB1           --             <---------ANAC58             <---------AHL20(2)    --------->YAB1              <--------   aaacaaaaaacattgacttgagcaaaaccctattctcaaaacgttttattgatcaaaaccctattttcatatttgatcaaaattcaaacttttcaacaaa  18900600         --------->AHL20(2)      --------->ATHB12         <---------ZAT14     --------->ICU4            --------->ZAT18 ------MYB46(1)                <---------ZAT18 ------MYB83                   --------->ZAT14 ---------ANAC55(2)       ---------->DOF2 -------->ANAC55(2)   --------->ARR14(2)                                                     -------- --------TOE2(3)      <---------ARR14(2)           <---------GLK1(2)                    --------->AHL20(2) ------->MYB59       <---------CCA1(2)       --------->YAB1       --------->ANAC58  <---------YAB1 ---------AG         --------->GLK1(1)<----------DOF2<-------TEIL --------->ANAC58--------->YAB1 ----   ttaggtattgattaaacaaacccatatccaaagttcactcctttcgatgatcagattcatcaattcgaacccaaaacccaaaaatcaaaattgaataaga  18900700                                                                        <---------ZAT2                                                                        --------->At4g35610                                                                        <---------At4g35610                                                                        --------->ZAT2                       ----------->GT1                                  ----------->RAV1(2)   -------                   --------->DAG2                            <------ZmHOX2a(2)               --------                  ---------->DOF2                           --------->ARR11(3)               <-------               --------->HSFB2a(2)                          <---------ARR11(3)              <------NtERF2            <-----------GT1    --------->YAB1         ------->MYC3    <-----------RAV1(2)   <-------- ->YAB1<---------GLK1(2) <---------ZAT6               <-------MYC3   <---------At4g35610   --------->RAP2.6(2) ----->GLK1(2) <---------HSFB2a(2)             ---------->DOF2   --------->ANAC46         -----------   atttgaacagaattttaccagaaagtagtgaaatcatagaaatcgaaatcaaagcacatgaagatcaacgaagcagctgagaaaatggtttggccgaaac  18900800                                     ------->MYC2                                     <-------MYC2                                     ------->PIF5                                     <-------MYC4                                     <-------PIF5                                     <-------PIF4                                     ------->MYC3                                     ------->PIF4                                  <------------OsbHLH66                                  <---------ALFIN1                                 <------NtERF2                                ------>NtERF2                                <-----------HVH21                                --------->LBD16                               --------->LBD16                               --------->ANAC46       --------->ZAT2         <---------LBD16       <---------At4g35610  <------ZmHOX2a(2)       <---------ZAT2    --------->HSFB2a(1)       --------->At4g35610 --------->ARR14(2)       ----------->RAV1(2) <---------ARR14(2)      --------->GLK1(2)  <---------HSFB2a(1) -->MYB52(1)             --------->HSFC1(2)                             <---------ICU4 ->ARR14(2)            --------->MYB52(1)                   ------>MYB83--------->YAB1         <----- --ARR14(2)           <---------SPL7 <-------MYC3           ------>MYB46(1)      --------->ANAC58 -RAP2.6(3)<------NtERF2--------->SPL7                    --------->TOE2(3)      --------->ANAC58 ------>AGL1        --------------->AtSPL3                <---------MYB59      ---------->DOF2<------   ggagagcgaagctggcgctagtgccgaacgatcccggcacatgctccatccaatttcaaacctaattctcttcatcatcacaaaagcaaaattcaaatca  18900900                 --------------->AGL15          <---------AHL20(1)          --------->AHL20(1)    --------->HSFB2a(2)                                                            <---------ANAC58    <---------HSFB2a(2)                  --------->DAG2             --------->ANAC58  <---------HSFB2a(2)              ----------->GT1                  <----------ID1 <---------ANAC46  --------->HSFB2a(2) ---------->DOF2   ---------->DOF2         <-----------HVH21  <---------ANAC58 ----ICU4 --------->ARR11(3)     ---------->DOF2       <-----------HVH21      ------->TEIL ---ATHB12<---------ARR11(3)---------->DOF2       ---------->DOF2   --------->ANAC58          <------   ttttctcgagaaaatatttctgagaaaagaaaaagaaaagagaaaagtgagccaaagggtcatacctgtaacgccaaatggacttgtgtgtttgctcttt  18901000                                 <----------DOF2                                                    <                                 --------------->AGL15                                              -                                 <---------DAG2                                                 <----                                 <---------------AGL15                                          -----                              <---------AHL20(2)                                               ------                              <-----------GT1                                                  <-----                         <---------AHL20(2)                                                    <-----                         --------->AHL20(1)                                                 ---------                         <---------AHL20(1)             --------->ZAT6                      <--------                         --------->AHL20(2)       --------->ZAT6                            ---------                        --------->AHL20(2)      --------->YAB1                              <--------   <----------DOF2      <---------AHL20(2)    --------->AHL20(2)                           --------->AHL20(2) ----DOF2             --------->YAB1         --------->YAB1           <---------YAB1<----------DOF2<-   attctcttttgctctgttttacaaaaataaatttactttataaactaaaataatactaacactcttcacattttcatttaagtcttctttctattaaatt  18901100       ------>ZmHOX2a(1)      --------->TOE2(3)          <---------YAB1 ---------AHL20(2)     <--------ATHB1 -------->AHL20(2)     --------->AHL20(2) -----AHL20(2)         <---------ICU4 ---->AHL20(2)         --------->ATHB51                                 --------->TOE1(3) --->AHL20(2)          <---------AHL20(2)                 --------->MYB46(3) ----AHL20(1)         <---------ATHB51                   --------->At4g35610 ----AHL20(2)         --------->ICU4      --------->GLK1(2)------->GAMYB--------->TOE2(3) >AHL20(2)          --------->YAB1    --------->YAB1     <---------At4g35610 -AHL20(1)    <---------ARR11(3) <---------AHL20(2)    <---------WRKY38(1)                       ---- >AHL20(1)    --------->ARR11(3)--------->TOE2(3)      <---------WRKY12 <----------DOF2          ---- -AHL20(2)---------->DOF2  ------------>CBF           --------->WRKY18(1)                      <----- --------AHL20(2)----------->GT1--------->YAB1<------------CBF <----------DOF2          <---------YAB1   atttatttcctaaaaagatttgtaataatttcaatattaatgagaatctattgccagtcaacagacttttgtaactttaaaaattggtttatgaatacca  18901200                                                                           ---------->DOF2                       <-----------GT1                                   <---------------AGL15                    <---------ICU4                                       --------------->AGL15                   --------->ICU4                                        ============================        --------->ARR11(3)   <---------GLK1(2)                     <---------ICU4       <------ZmHOX2a(1)    <---------ZAT2                        --------->ICU4        ----------->GT1 -->MYB83         <---------TOE2(3)    <---------ANAC55(2)        <---------YAB1       <---------TOE2(3) -->MYB46(1)    <---------AHL20(2)     --------->ANAC55(2)     <---------YAB1         --------->YAB1 ----MYB59  ----------->GT1 --------->ZAT2------->TEIL       ----------->GT1    ----------->GT1   aattgtataggatgttgtttaatgtttaccagcttcttgttatgtatttggaacaaaaacaaattgtgattatttcccaaagaagttataatgttatatg  18901300  Previous    Next  AGI:  At3g50810.1    Description:  integral membrane protein, putative. Identical to UPF0497 membrane protein At3g50810 [Arabidopsis Thaliana] (GB:Q9SVL7); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G37235.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41610.1); contains InterPro domain Protein of unknown function DUF588 (InterPro:IPR006702) Range:  from: 18898595    to: 18900849    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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