Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------ZAT14                                                                                          --------->ZAT14                              --------->KAN4(2)                                         --------->REM1(2)                             <---------HSFB2a(1)                                       <---------ANAC46                             --------->HSFC1(2)                                      <---------ANAC46                             --------->HSFB2a(1)                                   <---------ANAC58                         ----------->GT1                                         --------->ALFIN1     --------->ATHB12   >>>>>>>>>TBF1                         <---------ICU4    ------->MYC3 --------DOF2  <---------AHL20(2)                          --------->YAB1       <-------MYC3 ->GLK1(1)    --------->YAB1 <---------HSFC1(2)   ----------->GT1<---------AHL20(2)<---------ANAC58   cttttcttcattggaataaaaatgaagaagaaaattcccatgggaacatatatagaaaaaatcatatttatacatggaaacatgtgggtgtgtatagtgt  18774600                            ------------------------>ANAC81                            --------->ANAC58                            ----------->GT1                            --------->ANAC58                           ------------------------>ANAC81                           --------->DAG2                                                          --               ----------->GT1                                                                    <--              ------------------------>ANAC81                                                     ---            --------->CCA1(2)                                                                  <-----           --------->ARR11(3)                                                               ---------           <---------ARR11(3)                                                               <--------           --------->ARR11(1)                                                            <---------DEAR3(1)           --------->ARR14(2)                                                          <------ZmHOX2a(1)           <---------ARR14(2)                                               ==================HOX2a_HOX2a       ---------->DOF2    ---------->DOF2                 ---------->DOF2   <------ZmHOX2a(2) <------NtERF2     >>>>>>>>>GATA-1 ---------->DOF2                 ---------->DOF2       <---------ARR11(3) -------    XXXXXXXXXXXXXXXXXXXX>MIR774B             ---------->DOF2               --------->ARR11(3)------>NtERF2   atgaatagataaagatatggataaaaagaaaagcaaaaaacaaaatgaaaagagagaaagaaaaggaatcaaaccaagatcacgagcgaggatggcgacg  18774700                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                       --------->RAP2.3(3)                                                     ------->GAMYB                                                    --------->DEAR3(1)                                                   ------>MYB46(1)       <---------ANAC46                            ------>MYB83 ------->ZAT14              --------->ALFIN1     --------->AtMYB61 <---------MYB52(1)  -------------- -------REM1(1)      <---------ANAC58           --------->DEAR3(2)<------NtERF2 ------>NtERF2 ------>ALFIN1       <---------ANAC58           --------->MYB46(3)<---------RAP2.6(3) --------->ZAT2 ----DEAR3(1)   --------->HSFC1(2)        <----------DOF2        --------->RAP2.6(2)  <---------ZAT2 >ETT(2)    --------->At4g35610         --------->ZAT2 --------->DEAR3(1)    --------->At4g35610 -DEAR3(1)  <---------At4g35610  ----------->HVH21--------->MYB52(1)         <---------At4g35610 -->ATERF1(1)   <---------HSFC1(2)      <---------ZAT2--------->ORA47(2)  <----------DOF2   <--------   gtgtagccttcgtgagcaaacttccgagcgatggagcgaccgagctttggaccaacgccgactacggccgctatgcctttgctgccagagctcgaactcc  18774800                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                                <----                            <----------DOF2                                                     -----                           ------>ZmHOX2a(2)                                                    <----                   <---------DAG2<----------DOF2                                         ----------->GT1                   <----------DOF2                 <----------DOF2                       <---------ZAT6       --------->YAB1    <---------ARR11(3)      <---------------AGL15    --------->AHL20(2)    ----- --------->TaNAC69(2)    --------->ARR11(3)      --------------->AGL15----------->GT1  ----------->GT1 -GLK1(1)<---------YAB1<---------YAB1  <---------ALFIN1      --------->REM1(1) ----------->GT1-------   ctacgtttctcatcatcgatactttatgatctttcctttctccaccttcttctctttatagctacttctctatggataaaatcgataaatagtgaaaaat  18774900  <---------YAB1 -------->YAB1 ------->ICU4 --------YAB1                                        >>>>>>>>>ARR2 ----->YAB1                          --------->TOE2(2) ------ICU4                    --------->ANAC46      >>>>>>>>>ARR1 -----AHL20(2)             ---------->ID1          <---------YAB1                                  -- ---->AHL20(2)           <---------ANAC58          <---------TOE2(3)                      <---------ZAT18 -----ATHB51             <---------ANAC58      --------->YAB1                             --------->ZAT18 ---->ICU4          <-----------RAV1(1)     <----------DOF2                        <---------YAB1*TSS -->YAB1           <---------TOE2(3) --------->TOE1(2)                      ----------->GT1    ------   aattataagaaaattttagtttatgttgtgtccccttaacctaggcctttaataagattgtgttgagagagtgagagagagaaatattcttgtggactag  18775000                                                                                              <------                                                                                              <------                                                                                      <---------AHL20(2)               <-----------TBP             <---------YAB1                         --------->AHL20(2)           <-------GAMYB                   ---------->ID1                         --------->YAB1<----        <---------ANAC58               <----------DOF2                            <---------AHL20(2)        <-------GAMYB              <----------DOF2                    <----------DOF2 --------->AHL20(2)        <---------ANAC58       <---------ALFIN1                      <---------------AGL15 <---------AHL20(2)       <---------MYB46(3)      --------->ANAC46--------->AHL20(2)    --------------->AGL15--------->YAB1 ------->AHL20(2)   <-------TEIL  <---------DAG2        ---------->DOF2        --------->WOX13(1) ----->GT1<---------MYB46(3) --------->ANAC46 <---------YAB1  <-------TEIL   ------------>CBF<-------   ataaatttttggttgttatatatacatatatacacacctttctttgtcattatatcagaaaagtttcatttcctttgatagcaattatataattttaaca  18775100      --------->bZIP60(1)      --------->TGA2(1)                       -------->ATHB1      <---------REM1(1)                       <--------HAHB4      <---------bZIP60(1)                     <---------ICU4      ----------->GT1               <---------DAG2<---------AHL20(2)    --------->YAB1                  <----------DOF2<---------YAB1  <---------AHL20(2)   --------->ICU4                  --------->TOE2(3)         --------->AHL20(2)   <---------ATHB12             <---------CCA1(2) --------->AHL20(2)   <---------AHL20(1)   <-------- ---YAB1                    --------->ANAC55(2)   --------->YAB1  --------->AHL20(2)   ---------->DOF2 ---TOE2(3)                 <---------ANAC55(2) <---------YAB1 <---------AHL20(2)>>>>>>>ZML2<-------- --------CBF             --------->ARR14(2)   --------->ATHB51 --------->AHL20(2)--------->HSFB2a(2)< ----GT1 <-----------GT1 <---------ARR14(2)  --------->ICU4  <---------AHL20(2)  <---------HSFB2a(2)>   ttgcaatgatgtaacaatttgcataagtatacgtatacctttatcgaattattaatattctatatatatataatatatgtgttctaggtgaaagatggta  18775200     <---------ATHB12                   <---------O2                                             ---- -------AtSPL8 <---------MYB46(3)       <---------ANAC46                                  --------->HSFC1(2) -------AtSPL3--------->ALFIN1      <-----------HVH21                                     <---------HSFC1(2) <<<<<<<<<<<<<<<<LFY               --------->bZIP60(2)                <---------ANAC58  <---------ARR11(3) >>>>>>>>>>>>>>>>LFY      ---------->DOF2                             <---------ANAC58  --------->ARR11(3)   ctgtccaatggatagtgtggttcttagacaaagagacatgtcatgtggaagaaaatatagcaattggttcttacttgttagactctacaagatgtttcga  18775300                                                --------->AHL20(2)                                  <---------bZIP60(2)                                  <---------ANAC58                                  <---------ANAC55(2)                      <----------DOF2           <---------AHL20(2)                    ------>MYB83  --------->ANAC55(2)                                            <---                    ------>MYB46(1)          --------->ARR14(2)                                  <---                  ------->GAMYB   <---------ANAC55(1)                                        <-------                  --------->DREB2C(2)        <---------ARR14(2)                              --------                 --------->DEAR3(2)          <---------ARR11(3)              ------->MYC3    <-------              <---------ETT(2)    <---------ANAC46                           <-------MYC3--------->ATHB12   ----------------->AGL3----------->GT1    <------ZmHOX2a(1)    --------->WRKY18(1)    <---------YAB1 ------>DOF2  --------->ETT(2)    <---------ANAC58  <-----------GT1    <-----------GT1 <-----------GT1   aaagacccatataaggtcgaccgacttttgtaaattacgtggtcgaggattttatttcgatctattggtcaatataccatatgcgaatttttcattgcac  18775400                                        --------->AHL20(2)          <------MYB46(1)               <---------AHL20(2)     --------->ATHB12             --------->YAB1    <---------YAB1               --------->AHL20(2) -------DOF2                   --------->TOE1(3)                   --------->YAB1 ------DAG2  <---------MYB46(3)--------->TOE2(3)           <---------ARR14(2) --ZAT14  <------MYB83 ----------->GT1 --------->AHL20(2)------->TEIL                           ----- ->ZAT14 <---------AtMYB61   <---------TOE2(3)    <---------AHL20(2)  --------->YAB1            ----- --ZAT18 --------->MYB59    <-----------GT1 --------->YAB1<---------GLK1(1)           <----------DOF2   ttttttatgatttggtcgttctaaattgtttaacattaaaaattaatagtatttttatgcatttctgaataataagaaactatagaaacttttgtgaatt  18775500  Previous    Next  AGI:  At3g50560.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G10050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74931.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 18772069    to: 18774997    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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