Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------AHL20(1)                                        <--------ATHB1                                ------->MYC2                                        <---------AHL20(2)                            <-------PIF5                                        --------->AHL20(2)                            ------->PIF5                                        <---------ICU4                                <-------MYC2                                        --------->YAB1                                <-------MYC3                                       --------->ICU4                          <---------ETT(1)                          ---------->DOF2       ---------->DOF2            <---------GLK1(1)   ------                        --------->TOE2(3) --------->ICU4              --------->LBD16--------->ANAC58                 --------->At4g35610 --------->YAB1                  <---------LBD16 --------->ANAC46                ------->GAMYB       --------->AHL20(2)         --------->HSFB2a(1)   --------->ANAC58              ---------->DOF2       <---------AHL20(2)         <---------HSFB2a(1) <---------ALFIN1 --MYB59     --------->MYB52(1)    --------->AHL20(2)   ---------->DOF2--------->LBD16------->MYC3 --   cttgattaagttgcataacagcacaacctaaggcccatttaataatttttaaaagcccaaaaggaatgtttccctgaatttccgaccacgcgcttaaaaa  18733000                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                                             <-------MYC3                                             ------->MYC3<---------ANAC58                                             <-------MYC2<---------ANAC58                                             ------->MYC2<---------ANAC46                                            --------->ANAC46                  --------->ARR11(3)            --------->LBD16        <---------ANAC46     <-------TEIL          <---------ARR11(3)           --------->LBD16      <---------AtMYB61      --------->ALFIN1   --------->ANAC55(2)     ---      <---------GLK1(1)      <-----------RAV1(1) <----------DOF2  <-------GAMYB               <------ ---->DOF2<---------LBD16<---------GLK1(1)  --------->ANAC58     --------->ALFIN1             <------ ------->ARR11(3)        --------->GLK1(1)  --------->ANAC58     <-----------RAV1(1) <----------DOF2   agaactcgatttccctgaattttggagatttctggtggtgtattacacgcgctataggtgcgtctgtgtgttggacacatgatatttcttttttgttcaa  18733100                                                                                     <-----------GT1                                                                                  <--------HAHB4   <-------TEIL              <---------ZAT18                                      --------->YAB1  --------->CCA1(2)    --------->TOE2(3)                                          <---------ICU4 <---------ARR14(2)   --------->ZAT6                    <-----------GT1          <---------AHL20(2) --------->ARR14(2)  <---------TOE2(3)               --------->YAB1              ----------->TBP ---->GAMYB  <---------ARR11(3)                      --------->TOE1(3)      --------->GLK1(2) ---WRKY38(1)--------->ARR11(3)    --------->MYB46(3)--------->TOE2(3)     <---------GLK1(2) ---WRKY12 --------->GLK1(2) --------->ZAT18 ---------->DOF2    ---------->DOF2  <---------YAB1  ----   cgggatacatgagaatatatactaacattagttcacaacaacttgaagaaagttatcttaactacacaaagtcaaaagattctataattacaaaattaga  18733200                                               <---------AHL20(2)                                               --------->AHL20(2)                                               --------->ATHB51                                               --------->ATHB12                                    --                                              <---------AHL20(2)                        <--------HAHB4                                           <---------AHL20(2)                           <---------ICU4                                           --------->AHL20(2)                          --------->ICU4                                          <---------AHL20(1)          <---------------AGL15        --         ----------->GT1                  --------->AHL20(2)          --------------->AGL15      <---        --------->DAG2                    <---------AHL20(2)         <-----------------AGL2   -------       ---------->DOF2                    --------->AHL20(1)         ----------------->AGL1 <-------- -------->CBF                  <---------AHL20(2)         ---------->DOF2              <---------YAB1   gcaatttgaaaaagttaattcaagtatgtgtatttacttagaaataaaattatttgttaacaaagaccatttccacatagagtcatacgataattaacct  18733300                          ------>ZmHOX2a(1)                      ------->PIF5                      <-------PIF5                     --------->ANAC58                     --------->ANAC46                     --------->bZIP60(2)                     --------->ANAC58                   ------->GAMYB                                          ---------->DOF2                   <---------ALFIN1                                    <----------DOF2 ---->NtERF2      --------->MYB46(3)                              ---------->DOF2 ------->LBD16   ------>MYB46(1)                                 --------->YAB1 ------LBD16     -------->P              --------->YAB1      <---------AHL20(2) -->MYB46(3)     ------>MYB83         --------->HSFB2a(2)    --------->AHL20(2) ---GT1   ---------->DOF2--------->TOE2(3)                  --------->AHL20(2) <----------DOF2   ccggcaagaagttaaagccaaccacgtccttaaattccttctataatatcgattagtctccatttaatcaaagctttaaagcttttctgaagaaaatgcc  18733400                                                                                       --------->YAB1                                                                                  ------>ZmHOX2a(1)                                                            --------->YAB1       --------->TOE1(3)                                                       ------>NtERF2             --------->TOE2(3)                                                      --------->ANAC58          ------>ZmHOX2a(2)                                                      --------->bZIP60(1)     <---------ARR14(2)                                                      --------->ANAC46        --------->ARR11(3)                                                      --------->ANAC58        <---------ARR11(3)                                                      <---------bZIP60(1)     --------->ARR14(2)                                                   --------->ANAC46          <---------GLK1(1)                      <---------At4g35610      ------>ZmHOX2a(1)             --------->GLK1(1)-------                  --------->ALFIN1             <-----------HVH21---------->DOF2<------ZmHOX2a(2) ----      <---------At4g35610               <---------ALFIN1   <---------YAB1   ----------->ARR10<-------   tcttgttgagcttcttacaagtgctgctcttggattgtccctccaactccttcacgacgccatcataagagccaaggagagatccttaatcacaagatgt  18733500                     --------->ANAC58                     --------->ANAC58               <------ZmHOX2a(2)                     --------->ANAC46              <---------ARR11(3)                     ---------->DOF2                   <---------ALFIN1                --------->ARR11(3)                 --------->HSFB2a(2) ---->GT1 --------->HSFB2a(2)                    <---------YAB1                       <---------HSFB2a(2) --->TEIL <---------HSFB2a(2)                 --------->ICU4     --------->DEAR3(1)<----------DOF2 --ARR11(3)       --------->ZAT14          <---------YAB1     <---------ALFIN1  ------->TEIL   atattggaccgtctcgatgctacactccataagataactccatttgtcattaagatcgataccctcaccgaagaagtcgatgaacctttcagaaaagtca  18733600                    --------->HSFB2a(2)                    <---------HSFB2a(2)                <---------At4g35610                  <---------HSFB2a(2)               --------->LBD16            <------ZmHOX2a(1)                  --------->HSFB2a(2)<---------ANAC46  --------->At4g35610  <---------LBD16      <----------DOF2    --------->ANAC58         <---------LBD16 --------->LBD16                   -   <---------ARR11(3)    --------->ANAC58    <---------ANAC58    --------->ANAC46     <---------TOE2(3)   --------->ARR11(3)  ---------->DOF2       <---------ANAC58   <---------------------WRI1          <   tcgaagagcttaaacgtcttctcgagaaagccattcgtctcgttgatgcttatgcggagcttaaactccgaaacttactcaggaaatataggtttgtgaa  18733700                                                   ---------->DOF2                                                  ------->GAMYB                                                 <---------MYB55(2)                                                 --------->MYB46(3)                    --------->ARR11(3)                                                ------>MYB83                           <---------ARR11(3)                                                ------>MYB46(1)                        --------->GLK1(2)                                              <---------MYB111(2)                -------->P       <--------HAHB4                         <---------MYB46(2)                 ------>MYB83       --------->ATHB12                       --------->MYB46(3)            <---------ARR11(3)       <---------ICU4                         <---------MYB111(1)           --------->ARR11(3)       --------->YAB1                      <-----------GT1                 --------->RVE1(1)      <---------ATHB12               --------->AHL20(2)                    --------->CCA1(1)<--------  <---------MYB52(1)             <---------ZAT6--------->MYB55(1)      --------->AHL20(2) <----------DOF2 ---------->GT1                  ----------->GT1-------->P    --------->TOE2(3)  ------>MYB46(1) ---------ANAC46   <---------AHL20(2)<---------AHL20(2)       <----------DOF2   ------>ZmHOX2a(1)   tgtcgttaatcatttccatatgtaaatgtaatgtagtgttaaattataccaaccaaagtatatactttaacaaaaaaatatcctaccaaaatcttttatt  18733800         <---------AHL20(2)        --------->AHL20(2)        <---------AHL20(1)        <---------AHL20(2)  --------->AtLEC2                   --------->MYB59  --------->ANAC58         ------->TEIL  <-------TEIL  --------->ANAC46         --------->GLK1(2)                                          <---------WOX13(1)  --------->ANAC58        <---------CCA1(2)                                        <---------YAB1 -AHL20(2)   <-----------RAV1(1)  <----------DOF2   --------->GLK1(2)   <----------DOF2     ---------   tttcatgcaatttttttgttgttgttgtgaatctttctttaggtacaagagaagaatcaaggagttggactcttctttgagatggatgatagatgtggat  18733900  Previous    Next  AGI:  At3g50450.1    Description:  HR1 (HOMOLOG OF RPW8 1). similar to HR3 (HOMOLOG OF RPW8 3) [Arabidopsis thaliana] (TAIR:AT3G50470.1); similar to HR3 [Arabidopsis lyrata] (GB:AAP45325.1); contains InterPro domain Disease resistance, plant (InterPro:IPR014011); contains InterPro domain Mildew-resistance, broad-spectrum (InterPro:IPR008808) Range:  from: 18733396    to: 18734116    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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