Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ----------->RAV1(1)                                                                              --------->ANAC46                                                                       <---------AHL20(2)                                                 <----------DOF2  <---------AHL20(2)                                              <---------------AGL15   <---------AHL20(2)                            --------->ATHB12  --------------->AGL15   --------->AHL20(2)         ----------->GT1 <---------AtLEC2  <-----------GT1        --------->AHL20(2)------->GAMYB  --   tataagttatattgtttattgtataatgcatgatttgatttgatttatcttcttttagtatgtgatatataattttatatatgcaacagaacacaatttg  18684900                                                       <---------ANAC58               --------->GLK1(2)                       <---------ANAC58                           <--              <---------GLK1(2)                  <-----------RAV1(1)                              ---              --------->ARR14(2)                 --------->ALFIN1                       <------ZmHOX2a(1)      --------->KAN4(2)                          <---------ANAC46                   =================     <----------TaMYB80      <----------DOF2  --------->ALFIN1                      ---------->DOF2 -------->DOF2<---------ARR14(2)              <---------AtMYB61     <---------MYB46(3)<---------TOE2(3)   caaaagtatattctcagattctattgtctgacttttgtccatgggagagtggtgttggcttctcttatattcgttgctaagcttgataaaggattatgca  18685000        <---------ARR14(2)        --------->ARR14(2)    <-------MYC3    ------->MYC3                                                   <---------ANAC58   <---------TGA1a                                                 <---------ANAC55(2)   <---------O2                                          --------->GLK1(2)   --------->O2                                          --------->ARR11(3)                    ------   --------->TGA1a                                  <------ZmHOX2a(2)             <---------YAB1   <---------ANAC55(2)  <---------AHL20(2)        --------->At4g35610          --------->AHL20(1)   <---------ANAC46     --------->AHL20(2)    <-----------HVH21    <---------ANAC58      <----------DOF2   --------->ANAC55(2) <---------WOX13(1)    <----------DOF2       --------->ANAC55(2)<-----------GT1   --------->ANAC46 <---------YAB1        ------>ZmHOX2a(2)        ----------->GT1<---------AHL20(2) -------ARR14(2)    --------->ICU4 <-----------GT1<---------At4g35610          <---------AHL20(1) ------>ARR14(2)  ----------->GT1  --------->MYB52(1)    <---------ARR11(3)   <---------AHL20(2) ============bZIP_DOF--------->ATHB12    --------->GLK1(1)         <---------ANAC46--------->YAB1   -   aattcacgtgaatttgcatatagtgattaattcagattaactgatctctttcagatcaaaatctttgtagcgtaacttatatatattataacttttgaaa  18685100         --------->ICU4         <---------ATHB51      <---------AHL20(2)      --------->AHL20(2)                              <---------ZAT14      --------->AHL20(1)                              --------->ZAT14      --------->ANAC55(2)     --------->AHL20(2)                              <---------REM1(1)     <---------ANAC55(2) ---->DOF2<---------ICU4   <------ZmHOX2a(2)         --------->ALFIN1      --------->ANAC58         < ---------->GT1  <------NtERF2                   ---------->DOF2           --------->ANAC58      <---   agaagaaaaaaattatggccgaagaaacgatcgaaatagtgagaaaatagagaaagtgtagggaacgatgagggagtaagtaacacatctgtgttttgtc  18685200                              ------>ZmHOX2a(2)                             --------->CCA1(2)                             <------ZmHOX2a(2)                            <---------AGP1                            --------->ARR11(3)                                   <---------DOF5.7(2)                            --------->ARR14(2)                                   <---------At5g28300                            <---------ARR14(2)                     ----------->HVH21                            <-----------ARR10                    <---------At4g35610                            --------->AGP1                       --------->At4g35610  <---------DAG2                            <---------ARR11(3)                   ----------->RAV1(2)  <----------DOF2 ---------WOX13(1)         <---------CCA1(2)              --------->MYB59      --------->DOF5.7(2)  - ------YAB1         --------->ANAC46               <-----------------AGL1 <---------CCA1(2)        --   tgattgtctgattaagaactacacatagcagatctgtgttttgttatgggccttcactattaggcccatctgacccatatcgttaccgctttttagtatg  18685300                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---        ------------>CBF        <---------MYB52(1)            <---------ARR11(3)                 ----      --------->REM1(1)        --------->TOE2(3)  --------->LBD16                        <---------ANAC46      --------->MYB46(3)   <---------ARR14(2)    --------->ANAC58                     --------->ARR14(2)    ----------->RAV1(1)    --------->ARR14(2)    --------->ANAC46      =====================HOX2a_HOX2a --------->ANAC58   ---------->DOF2      <----------DOF2      --------->ARR11(3)      <---------ARR14(2) --------->ANAC58  *TSS--------->At4g35610       --------->ANAC58      ------>ZmHOX2a(2)<-------TEIL -------->DAG2   <---------TOE2(3)   <---------GLK1(1)    ---------->DOF2            <------ZmHOX2a(1) -------->DOF2 ---------->DOF2 --------->TOE1(3)<---------LBD16  <----------DOF2     <---------HSFB2a(1)   gaaaagcaacaacaatgtaaaggaaagcagaaacgttagatttctttagacgcgcaaactgaaagagctttgatcgatcgatttggaggattcgtagaag  18685400              --------->TOE2(3)                                     ------>ZmHOX2a(2)           <-----------GT1                                         <---------GLK1(1)     --------->MYB52(2)                                            <------ZmHOX2a(2)    <-------TEIL                                                   --------->GLK1(1) ------>ARR14(1)                                                  --------->ARR11(3) ------>CCA1(2)                                                   <---------ARR11(3)             <--- ----->ARR11(3)                                                   <---------ARR14(2)       <---------WOX13(1) ------ARR11(3)                                                   --------->ARR14(2)     --------->ATHB12 ----->ARR14(2)                         <---------YAB1           <------ZmHOX2a(1)    <---------AtLEC2 ------ARR14(2)            <----------DOF2                     <---------TOE1(3)      <---------ANAC58 ----->ARR11(1)<----------DOF2   <---------AHL20(2)            <---------TOE2(3)      <---------ANAC58   atatggttcgttcttacctttgattctgtctttattttttttatgtttagagattagcaatttctaaggatctctagataacaattttgcatgatggatt  18685500           ------>ZmHOX2a(2)          --------->CCA1(2)          <------ZmHOX2a(2)         --------->ARR11(3)                                          <---------ARR11(3)         --------->ARR14(2)                                 <---------WOX13(1)                   ----         --------->AGP1                                   --------->ATHB12           <----------DOF2         <---------ARR11(3)                              <---------YAB1      --------->ANAC58    <---         <---------ARR14(2)                              --------->ICU4      --------->ANAC58    <---         <---------AGP1                               ------------>ATHB5     --------->ANAC46    ---- ------AHL20(2)                                  <---------TOE2(3)   --------->ARR11(3)   <---------ZAT6   tttttttttaagatctgatttgtatttagcgaatgttagaatgaagaaattagggttccatgattgaagaagattttagacgaaaccctttagtgttaga  18685600                                                                                <---------ICU4                                                                               <---------YAB1                                                                               --------->ICU4                                                                            --------->TGA2(2)                                                                           <-----------TGA1                                                                          <---------TGA1a                                                                          --------->bZIP60(2)                                                                          --------->TGA1a                                                                          --------->ANAC58                                                                          <---------O2                                                       <---------HSFC1(1) <---------bZIP60(1)                                                       <---------HSFB2a(2)--------->bZIP60(1)    --------->GLK1(2)              ----------->GT1     --------->HSFC1(1) --------->O2    --------->bZIP60(1)   --------->ARR11(3)              <---------ANAC46    --------->HSFB2a(2)--------->ANAC58--------->ANAC46   <---------ARR11(3)       --------->ZAT14           <---------ANAC46    <---------TGA2(1) ----------->ARR10      --------->ATHB51      <---------ARR14(2)          --------->ANAC55(2) ----->ZAT2             <---------ICU4        --------->ARR14(2)         <-----------STF1 <---------bZIP60(1) ------ZAT2             --------->ATHB12   --------->ANAC46       <---------ARR14(2)  <---------WOX13(1) ------At4g35610       --------->ICU4 <---------ARR14(2)   ---------->DOF2--------->TGA2(1) ----->At4g35610       <---------YAB1 --------->ARR14(2)   =========================bZIP_DOF   gctgagattttgaattttggatgttattattgcagtcgagtatatacagaactgtttcgagaaaagagaaaccgagacgtcatcatggattgacgacaca  18685700                           <---------At4g35610                     <----------DOF2                                       <-----------RAV1(1)                <------ZmHOX2a(1)                                         <---------TOE2(3)              <---------TOE1(3)                 --------->HSFB2a(2)    <----------DOF2              <---------TOE2(3)  ----------->HVH21   <---------YAB1 --------->ARR11(3)            <--  --------->ANAC58 <---------HSFC1(2)           <---------HSFB2a(2) <---------ARR11(3)----------->GT1  --------->ANAC58 --------->HSFC1(2)      <---------MYB46(3)   ---------->DOF2      <---------TOE2(3)   gaagaagcaagagattaaggaagcttttgagctatttgacactgatggttctggtaccattgatgctaaagagcttaatgttgctatgaggtaatatcga  18685800  Previous    Next  AGI:  At3g50360.1    Description:  ATCEN2 (CENTRIN2); calcium ion binding. similar to caltractin, putative / centrin, putative [Arabidopsis thaliana] (TAIR:AT4G37010.2); similar to caltractin, putative / centrin, putative [Arabidopsis thaliana] (TAIR:AT4G37010.1); similar to Caltractin (Centrin) (GB:P41210); contains InterPro domain Flagellar calcium-binding protein (calflagin); (InterPro:IPR003299); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 18685319    to: 18686694    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version